Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1847 ATGCAAGCATCCCAGAATCGGCAGGCTTCATCTGTGATCCATGAGATGTATCAACAGTCTGTGCAAGAGATGGATCCTTACTATTTATCTCATTTTCACGTATTGGGAAACCATGTCTCTCCTGACACAAGCAGCCAGGGAAACGGTGTTAACTTCTCTTCCTGTAAGGATCAGTTCTTTACTCTGGAATCATTCCCGGCTACTGCTGATCTGAGTGCCTGTAATTCACCTTCTGCTGTGAGTGTTCTGTCTTCCAGGAGTCCCTTCTCACCTCAAGGTTCTCAGTCATGCTCTTCAGATCAACACCATTCCTTTGACAACACATGCGGATCACCTCTAAGTGGATGCTCTGTAACTGATGACGATAACGAATTAAAGCACAAGCTGAAAGAATTAGAAATTTCTTTGCTGGGGCCTGAATCTGATATTGTGGATAGCTGCTACTGTTCTTTCAGGGGTGGGGGTCATCGAGATGCTGCCATGGCAAGGCGGAACTGGAATCAAGTGGTTGAAATGATTCCTAGATTAAGTCTTCAAGACACGCTTATTCATTGTGCCCAAGCGATTCATGATTCCGATCTAAATGTGGCAACATTATTTTTGGATGTTTTAGGGCAGATGGTTTCTGTCTCTGGTGATCCAGCCCAGAGGTTGGGAGCTTACTTGTTGGAAGGGCTTAGAGCGAGGTTGGAACGATCTGGAAGTGCAATATACAAGGCCTTAAAGTGTGAAGAGCCAACAAGCTCTGAACTAATGTCATATATGTCTATTCTATTCCAGATCTGCCCGTACTTCAAATTTGGTTACACTTCTGCAAATGCTGTCATTTGGGAGGCCATGGTAAATGAACCAATAATCCACATTATTGATTTTCAAATCGCACAGGGTAGTCAGTATATACCTCTCATCGATGATCTTGCCAATCGGCCTGGTGGACCCCCAGTTCTTCGCATTACAGGTGTGGACGATTCCCAATCAGCTCATGCTCGGGGAGGGGGACTACAAATTGTGGGACAGAAGTTAGCTCAGCTGGCGCAATCAAAAGGAATTCCCTTCCAATTTCATGCAGCTGCAATGTCTGGTTGCGAGGTCGAACGCAGTAATCTTAGAATACGACCCGGAGAAGCCTTGGCCGTAAATTTTCCATATGCCTTACACCACATGCCAGATGAGAGCGTGAGCACACAGAATCACCGAGACCGGCTTCTAAGGCTAGTTAAGAGTCTATCACCGAAAGTAGTAACCATTGTTGAGCAGGAATCCAACACCAACACATCCCCGTTCCTTCTTCGCTTTATAGAGACACTGGATTATTACACTGCTATGTTCGAGTCAATAGATGTAGCTCGTTCAAGAGACGACAAGCAGCGAATCAGGGCAGAGCAACACTGTGTCGCTCGAGACATAGTGAACATGGTAGCTTGTGAAGGGTTTGAAAGGGTAGAACGTCATGAACTCCTTGGCAAGTGGAGGATGAGAATGAGAATGGCTGGTTTCACTCCATGTCCAATGAGCTCCTCTGTAACTGGAGCTGTCAAGAATATGTTGAGGGATTTCAACGAGAACTATAGACTCCAAGAAGTGGATGGCGCTATCTACCTTGGCTGGAAAAACAGAGCAATGGCAACCTCCTCTGCATGGAGATGA 1647 45.84 MQASQNRQASSVIHEMYQQSVQEMDPYYLSHFHVLGNHVSPDTSSQGNGVNFSSCKDQFFTLESFPATADLSACNSPSAVSVLSSRSPFSPQGSQSCSSDQHHSFDNTCGSPLSGCSVTDDDNELKHKLKELEISLLGPESDIVDSCYCSFRGGGHRDAAMARRNWNQVVEMIPRLSLQDTLIHCAQAIHDSDLNVATLFLDVLGQMVSVSGDPAQRLGAYLLEGLRARLERSGSAIYKALKCEEPTSSELMSYMSILFQICPYFKFGYTSANAVIWEAMVNEPIIHIIDFQIAQGSQYIPLIDDLANRPGGPPVLRITGVDDSQSAHARGGGLQIVGQKLAQLAQSKGIPFQFHAAAMSGCEVERSNLRIRPGEALAVNFPYALHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIVEQESNTNTSPFLLRFIETLDYYTAMFESIDVARSRDDKQRIRAEQHCVARDIVNMVACEGFERVERHELLGKWRMRMRMAGFTPCPMSSSVTGAVKNMLRDFNENYRLQEVDGAIYLGWKNRAMATSSAWR 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 37109263 37110909 + CePI673135_04g018470.1 Cec04g1847 201329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1847 548 ProSiteProfiles GRAS family profile. 169 548 IPR005202 -
Cec04g1847 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 147 547 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cec04g1847 548 Pfam GRAS domain family 179 548 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1847 Cec-Chr4:37109263 Cec10g0453 Cec-Chr10:5397401 1.40E-148 dispersed
Cec04g1847 Cec-Chr4:37109263 Cec03g0134 Cec-Chr3:1305707 2.40E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29408 PF03514 GRAS 6.30E-127 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1847 K27748 - csv:101207883 994.186