Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1863 ATGGCGACCTCATGTTTCGGTTCACTTAGGATTCGTAAATCGAAGAGCAAACCCTTATCAACCCCTTCCTCGTTGAAATCCCAGATGAATTCTGAAATGGAAAATATGGAAAGGAGAAGATTTGATAGTTTGGAATCGTGGTCAATGATCCTAGAGTCTGAAAATGTGGAAACCTGGGAGACAGCAAAGGAGGATCAGGAGGAGTGGACAGCTGATCTATCTCAACTCTTCATTGGTAACAAATTTGCCTCTGGTGCTCACAGTCGGATTTACCGTGGAATTTACAAGCAGAGAGCCGTTGCTGTGAAGATGGTGAGAATTCCAAACCAAAAAGAGGAAACAAGAGCCAAACTCGAGCAACAGTTCAAGTCTGAAGTTGCCTTGCTTTCTCGTCTCTTTCATCCCAACATAGTTCAGTTCATTGCAGCCTGTAAAAAGCCACCTGTATACTGCATAATTACAGAGTATATGTCACAAGGAACTCTGAGGATGTATCTTAACAAGAAAGAGCCATATTCACTCTCAACAGAAACAATATTGAGGTTAGCTCTTGACATATCAAGAGGAATGGAATACCTCCATTCCCAAGGAGTAATCCACAGAGACCTCAAATCAAACAACTTGCTTCTAAATGATGAAATGAGAGTAAAAGTAGCCGATTTCGGAACATCCTGCCTCGAAACACAGTGCCGAGAATCAAAAGGGAACATGGGAACTTACCGATGGATGGCGCCGGAGATGATCAAGGAGAAGCCTTATACTCGCAAAGTTGATGTGTACAGCTTTGGGATTGTGCTGTGGGAGCTTACCACGGCTCTGCTTCCGTTTCAAGGGATGACCCCCGTGCAAGCTGCCTTTGCCGTCGCCGAGAAGAATGAGAGGCCACCATTACCGGCGAGTTGTCAGCCGGCACTAGCCCACCTGATAAAGCGGTGTTGGGCGGCGAATCCGTCGAAGCGGCCGGATTTCAGCGACATTGTGGTGGCTTTGGAGAAATACGATGAGTGTGTGAAAGAGGGTCTTCCCCTTGCACACCATAGGAGATTGGTAAACCGAAACGCCATTATCGAACGCTTGAAAGCTTGCGCTTCAACCAGTTCTTCAATCCCTGTACATGCCTAA 1122 46.17 MATSCFGSLRIRKSKSKPLSTPSSLKSQMNSEMENMERRRFDSLESWSMILESENVETWETAKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRESKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVVALEKYDECVKEGLPLAHHRRLVNRNAIIERLKACASTSSSIPVHA 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 37211515 37212924 - CePI673135_04g018630.1 Cec04g1863 201345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1863 373 PANTHER SERINE-THREONINE PROTEIN KINASE 55 331 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec04g1863 373 CDD STKc_MAP3K-like 83 327 - -
Cec04g1863 373 PRINTS Tyrosine kinase catalytic domain signature 238 248 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1863 373 PRINTS Tyrosine kinase catalytic domain signature 154 167 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1863 373 PRINTS Tyrosine kinase catalytic domain signature 301 323 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1863 373 PRINTS Tyrosine kinase catalytic domain signature 192 210 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1863 373 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1863 373 ProSiteProfiles Protein kinase domain profile. 76 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1863 373 SMART serkin_6 76 337 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1863 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1863 373 SUPERFAMILY Protein kinase-like (PK-like) 52 327 IPR011009 -
Cec04g1863 373 FunFam Serine/threonine-protein kinase isoform 1 66 158 - -
Cec04g1863 373 MobiDBLite consensus disorder prediction 14 31 - -
Cec04g1863 373 Pfam Protein tyrosine and serine/threonine kinase 79 329 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1863 373 FunFam serine/threonine-protein kinase HT1 159 352 - -
Cec04g1863 373 Gene3D Transferase(Phosphotransferase) domain 1 159 354 - -
Cec04g1863 373 Gene3D Phosphorylase Kinase; domain 1 65 158 - -
Cec04g1863 373 MobiDBLite consensus disorder prediction 13 32 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0596 Cec-Chr3:6357934 Cec04g1863 Cec-Chr4:37211515 6.10E-89 dispersed
Cec04g1863 Cec-Chr4:37211515 Cec04g2011 Cec-Chr4:38272286 9.70E-90 dispersed
Cec04g1863 Cec-Chr4:37211515 Cec01g1470 Cec-Chr1:29367565 2.60E-111 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71941 PF07714 PK_Tyr_Ser-Thr 5.30E-68 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1863 - - - 0.0