Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1932 ATGCAAAGAATGATGGAAGCCTACAAAATTGGATTCGGCTGCGCCTCTCTCAAAACTGATTGGATGAAGGAATTGATTGGACCCAAATGCCAAAAAAATCCAAATTCAAATGCCGGACAACAACCCGACAAGGTTAACGCCATCGCCCTTTGCCTGGCCGATCTAACGCTGGAGAAATGCAGGAGCTGTCTCCAAAATTCGACTAGAAGGATTCTTGAGGATTGTCCAAACCAGAAGGGAGCTATCGGATGGTACACCGATTGCATGATTCGTTACTCAAATAAATCAATATTTGCGGTTGGGAACAACCAAGTGATTGAGCCAGTTTTTATTGCTGGCCGGAATGCATCGGACATAGCTGGCTACACTCAATCACTCAGAACTTTGTTGCAAAGACTGAGAAATGAAGCTGCCTCTGGGGATTCTAAACTTAAATTTGCAGTGGGTGTTGCTCTTGGAGACTCTGCAGAGGAAATTAACAACGTAGAGACCATTCAATTTGATTTTGAAACCATTAAAATTGCAACAGACGACTTCGCAGGTGAAAACAAACTTGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTAAGCTACTTAATGGACAACATATTGCGGTGAAGAGGCTTGCAAATAATTCACAACAAGGAGATACTGAATTTAAAAACGAAGTCATGTTGGTGGTCAAGCTTCAACATCGAAACTTGGTCAGGCTATTGGGATTCTGCTTGCAAAATAATGAAAGACTTCTCATATATGAGTTTGTACCAAATGCTAGCCTGGACCAATTCATTTTTGATTCTCGCCTTCGAATCATACATCACGATCTTAAAGCTAGTAATATTTTGTTGGATGCTGAAATGAATCCAAAGATTGCAGATTTTGGTATGGCAAGATTGTTTGAAATAGATGAGACTCAAGGCAATACAAGTAGAATTGTGGGAACTTATGGATATATGGCTCCGGAGTATGCAATGCATGGGCAATTTTCAGTAAAATCGGATGTGTTTAGCTTTGGTATTTTGGTTATTGAAATTGTGAGTGGGTGGAAAAATAACTGTTTTCGCAATGGAGAAAAAGTAGAAGATCTATCTAGCTTTGCATGGAAAAATTGGAAAGCAGGGACTACTTCGCATGTCATTGACCCAACATTGAATGCTGGTTCGCAAATTGAAATGATGAGGTGCATTCACATTGGACTCTTGTGTGTTCAAGAGAATGCAGCAAATCGCCCAACAATGGCTTCGGTGGTTCTAATGCTGAGTGGTTTCTCTCTCACTCTTCCTATACCTTCTGAACCAGCCTTCTTTATTCATAGTAAGATTGATGAAACCAGAACATTATCAAACCCAAGTCGTTGGTTGGAGGCTAATGATTCTGGAAGTACATCCCTTCAACCTTCTTCGAAAGAAACAACTTCAACAGTTGGTTCTGAGTCGGTTGGTGATCTAAAAAAGGCTGCTGAACAGAGTGTCGAAGGAACACGACCTACCGAATGTGTTCCGAAGTCCGCGGGTAAAGAAGTTGAAGAGACGGTTCAGTTGCAGCTGAACCGACTGAGATCACAGGGAGTGATCCCCACAGTTGCTAAAGCCGGACAGCAACTCGACAAGGTTAACGCCATCGCCCTTTGCCTGGCCGATCTGACGGTGGAGAAATGCAGGAGCTGTCTCCAAAATTCGACTCGAAGGATTCTAGAGGATTGTCCCAACCAGAAAGAGGCTATCGGATGGTACACCGATTGCATGATTCGTTACTCAAATAGATCAATATTTGGCGTTGGGAGCGATCAAGTGCTTAGGCCAACTTTTGTTTCCGGTCGGACTGCATCAGACGTAGTTGGGTACACTCAATCGCTAAGCAGTTTGTTGCAAAGACTGAGAAATCAGGCTGCATCTGGGGATTCTAAACACAAATTCGCAGTGGGTGTTATTGGGGACACCACTGACGAAATTAGCAGTGTGGAGACCATTCAATTTGATTTTGAAACTATTAAAATTGCAACCAGCGATTTTTCAAGTGAAAACAAGCTGGGACAAGGTGGATTTGGAGCTGTTTACAAGGGTAAACTAGCTAACGGACAATGTATAGCAGTGAAGAGACTTGCAAATAATTCACAACAAGGAGATTTTGAATTCAAAAATGAAGTCCTTTTGGTGGTCAAACTTCAACATCGAAACTTGGTTAGGCTGTTGGGATTTTGCTTGCAAAGAACTGAAAGACTTCTCATATATGAGTTCGTACCAAATGCCAGCCTTGACCAATTCATATTTGATTTTGGAAAAAGGACACAATTAGATTGGGAAAGACGATTCAAAATCATAAACGGCATTGCACGAGGACTTCTTTACCTTCATGAAGATTCTCGCCTTCGAATCATACATCGTGATCTCAAAGCTAGTAATATTTTGTTGGATGAGGAAATGAATCCGAAGATTGCAGATTTTGGTATGGCAAGATTGTTTGAAGTAGATGAGACTCAAGGCAATACAAGTAGAATTGTGGGAACTTATGGCTATATGGCTCCAGAGTATTTAATGCATGGCCAATTTTCAGTTAAATCAGATGTCTTTAGCTTTGGTGTTTTAATTCTTGAAATTGTGAGTGGCAAGAAAAATAGTTGCTTTCGCAATGAAGAAAAGATAGAAGATCTCTCCAGCTTTGCATGGAAAAATTGGAAGGCTGGAACGACTAATAATGTCATAGATTCAACACTTAGCGTTGGTTCTAGTGTTGAAATGTTAAGATGCATTCACATCGGATTATTGTGTGTTCAAGAGAATGCAGCAGATCGTCCAACGATGGCTACGGTGGTTCTAATGCTTAGTAGCATCTCTCTTACTCTTCCAGTACCTTTGGAACCAGCATTCTTCATGCACACTAACATTGATGAATCCAACACACATTCAAAGAGAAATCAGTGGCTGGAAATGAATGAGACGGCTAGTCATTCTGAAAGCCTACCTCTTCAATCTTTATCCAACGAAGCTTCAATTAGTGAGCTCAACCCCCGCTAG 3015 41.36 MQRMMEAYKIGFGCASLKTDWMKELIGPKCQKNPNSNAGQQPDKVNAIALCLADLTLEKCRSCLQNSTRRILEDCPNQKGAIGWYTDCMIRYSNKSIFAVGNNQVIEPVFIAGRNASDIAGYTQSLRTLLQRLRNEAASGDSKLKFAVGVALGDSAEEINNVETIQFDFETIKIATDDFAGENKLGQGGFGAVYKGKLLNGQHIAVKRLANNSQQGDTEFKNEVMLVVKLQHRNLVRLLGFCLQNNERLLIYEFVPNASLDQFIFDSRLRIIHHDLKASNILLDAEMNPKIADFGMARLFEIDETQGNTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVIEIVSGWKNNCFRNGEKVEDLSSFAWKNWKAGTTSHVIDPTLNAGSQIEMMRCIHIGLLCVQENAANRPTMASVVLMLSGFSLTLPIPSEPAFFIHSKIDETRTLSNPSRWLEANDSGSTSLQPSSKETTSTVGSESVGDLKKAAEQSVEGTRPTECVPKSAGKEVEETVQLQLNRLRSQGVIPTVAKAGQQLDKVNAIALCLADLTVEKCRSCLQNSTRRILEDCPNQKEAIGWYTDCMIRYSNRSIFGVGSDQVLRPTFVSGRTASDVVGYTQSLSSLLQRLRNQAASGDSKHKFAVGVIGDTTDEISSVETIQFDFETIKIATSDFSSENKLGQGGFGAVYKGKLANGQCIAVKRLANNSQQGDFEFKNEVLLVVKLQHRNLVRLLGFCLQRTERLLIYEFVPNASLDQFIFDFGKRTQLDWERRFKIINGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFEVDETQGNTSRIVGTYGYMAPEYLMHGQFSVKSDVFSFGVLILEIVSGKKNSCFRNEEKIEDLSSFAWKNWKAGTTNNVIDSTLSVGSSVEMLRCIHIGLLCVQENAADRPTMATVVLMLSSISLTLPVPLEPAFFMHTNIDESNTHSKRNQWLEMNETASHSESLPLQSLSNEASISELNPR 1004
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 37671926 37689277 + CePI673135_04g019320.1 Cec04g1932 201414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1932 1004 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524(InterPro)
Cec04g1932 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1932 1004 Pfam Salt stress response/antifungal 527 588 IPR002902 -
Cec04g1932 1004 Pfam Salt stress response/antifungal 35 95 IPR002902 -
Cec04g1932 1004 Gene3D - 25 96 IPR038408 -
Cec04g1932 1004 Gene3D - 501 589 IPR038408 -
Cec04g1932 1004 SUPERFAMILY Protein kinase-like (PK-like) 167 450 IPR011009 -
Cec04g1932 1004 FunFam Cysteine-rich receptor-like protein kinase 10 634 746 - -
Cec04g1932 1004 FunFam Cysteine-rich receptor-like protein kinase 10 145 254 - -
Cec04g1932 1004 ProSitePatterns Protein kinases ATP-binding region signature. 185 207 IPR017441 GO:0005524(InterPro)
Cec04g1932 1004 Pfam Protein tyrosine and serine/threonine kinase 674 938 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1932 1004 Pfam Protein tyrosine and serine/threonine kinase 182 265 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1932 1004 Gene3D Transferase(Phosphotransferase) domain 1 260 426 - -
Cec04g1932 1004 Gene3D Transferase(Phosphotransferase) domain 1 747 948 - -
Cec04g1932 1004 SUPERFAMILY Protein kinase-like (PK-like) 659 978 IPR011009 -
Cec04g1932 1004 SMART serkin_6 671 945 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1932 1004 SMART serkin_6 179 424 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1932 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1932 1004 Gene3D Phosphorylase Kinase; domain 1 646 746 - -
Cec04g1932 1004 Gene3D Phosphorylase Kinase; domain 1 154 254 - -
Cec04g1932 1004 ProSiteProfiles Protein kinase domain profile. 179 435 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1932 1004 CDD STKc_IRAK 677 944 - -
Cec04g1932 1004 MobiDBLite consensus disorder prediction 979 1004 - -
Cec04g1932 1004 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 491 957 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec04g1932 1004 ProSiteProfiles Gnk2-homologous domain profile. 486 590 IPR002902 -
Cec04g1932 1004 Pfam Protein kinase domain 270 362 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1932 1004 MobiDBLite consensus disorder prediction 449 479 - -
Cec04g1932 1004 MobiDBLite consensus disorder prediction 449 504 - -
Cec04g1932 1004 FunFam Cysteine-rich receptor-like protein kinase 28 747 949 - -
Cec04g1932 1004 ProSiteProfiles Gnk2-homologous domain profile. 1 97 IPR002902 -
Cec04g1932 1004 FunFam cysteine-rich receptor-like protein kinase 10 243 427 - -
Cec04g1932 1004 ProSiteProfiles Protein kinase domain profile. 671 956 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1932 Cec-Chr4:37671926 Cec04g1935 Cec-Chr4:37706647 1.20E-153 dispersed
Cec04g1932 Cec-Chr4:37671926 Cec04g1933 Cec-Chr4:37690353 3.60E-46 tandem
Cec04g1737 Cec-Chr4:36411106 Cec04g1932 Cec-Chr4:37671926 1.50E-13 transposed
Cec06g0811 Cec-Chr6:9985877 Cec04g1932 Cec-Chr4:37671926 2.30E-65 transposed
Cec03g0484 Cec-Chr3:5132788 Cec04g1932 Cec-Chr4:37671926 3.30E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71944 PF07714 PK_Tyr_Ser-Thr 2.40E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1932 - - - 0.0