Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1934 ATGATTTATCCCACCATTTCCCAGCTAGACTTCGCCAAATCTTCATGTCTAAACGCCGGCAACTACACCACCCCCAACAGCACTTACTGGAAAAATCTAGAAACCCTACTTTCCTCCGTGTCGTCCCATCCCCAGTTGATAAGTAACGGCTTTTACAATCTCTCCGCCGGAGAGGAGCCGGACAGAGTGAACGTGGTGGCCCTGTGCATTGGAGATGTTTCGATGGATATATGCAGGGCTTGCGTGGAGGAATCGAGTCGGAATATTTTAGAGGTTTGCCCCAACCAGAAGGCTGCAATCGTGTGGTACGATCAGTGCTTGCTTCGGTACTCGGGGAGTGGAAATTACGATTGGTGGATGGAGTCTATTTTCAACGGCAATAAGGCGTCGTCGGACCCGAATATGTTCGTTGAGGCAGTGAAGAGCTTGATGGGGAGACTAAAGGAAGAGGCTGCTTCAGGGAATTCGACTCAGAAACTGGGGAGCGGGGAGATTTCGGCCGGCAACGAAGCTGTGTACGGACTTGTGCAGTGCATTCCCGACATGTCGTCGAGAGAATGCGACAGGTGCATTGGTGAGGGTTTGGTGCTGATCTTTGAGGCTAGGATCGGAGCAAGAATATTTAGTGGTGGTTGTGTTTTGCGATACGAGAACTATATTTTCTTCAATTGGAGGCCCAATGCCTCTTCCTTCTCATCTCCTCTGCCAACTGCAGGAAGCAAAAAAGGCAGAGGCAAAACTACCGCTATCATAGTCATTGTAATGTCAATTATTTCTACCGTCGTTCTTTTTATTGGCATTTACTTCGTTTTGCGGATGAAAAGACGAAAATGCAAAATACCATCGGAAGAAGTTCAAATCAAAGGCATTGCCTGCAAAGAAGCAACAGATGAAATTAGCAATGTGGAGACGATTCAATTTGATTTTGAGACGATCAAAGTAGCAACAAATGAGTTCTCAGATGAAAATAAACTTGGACAAGGTGGATTTGGATCTGTTTACAAGGGAAAGTTGTCTGATGGACAAAACATAGCAGTGAAGAGGCTCTCAAGAGATTCAAATCAAGGAGACTTGGAATTCAAAAATGAAGTCCTTGTAGTGGCCAAGCTTCAACACAGGAACTTAGTTAGGCTGCTAGGGTTCTGCTTTGATGGAAATGAAAGGCTTCTCATCTATGAGTATCTACCAAATGCCAGCCTTGATCAGTTTATCTTCGATCTTATCAAAAGAACAGTTTTGGATTGGAAAACACGATACAAAATTATAAGTGGCATTGCTCGAGGATTGCTATACCTCCACGAAGATTCCCGTGTTCGAATCATTCATCGAGATCTCAAAGCTAGCAATATTTTGTTGGACGGAAAAATGAATCCTAAAATTGCCGACTTTGGTATGGCAAGATTATTTGAATTAGATGAGACTCAAGGTCAAACCAGGAGAATTGTGGGAACTTATGGTTACATGGCTCCAGAATATGCATACCATGGACAATTCTCACCAAAATCAGATGTGTTTAGTTTTGGAGTTCTAATTCTTGAGATTATAAGTGGCCAGAAAAATGTTTGCTTTTGCGATGAAGAGGAAGACAAAGATCTTTTAAGCTCTGCATGGAAAAATTGGAGAACAGGAAAACCTGAAAATATAATAGATAAGATACTAATATCAAGTTCGAGCGCTGAAATAATAAGATGTATTCATATTGGACTGTTATGTGTTCAAGAAAATGTGGTAGATCGACCAACAATGGCTTCTGTAGTTTTGATGCTCAACAGCTTCTGTCTCCCACTCTCTCTACCCTCTGAACCTGCCTTTTTGTACAGCAATAATTACTACTCAAATGCACGTAATTCTCAAACTGCTCCTCTTCCAGCTTCAGGAAATGGAGTTTCCGTTTCTGATGTTTATCCTCGTTAG 1914 42.63 MIYPTISQLDFAKSSCLNAGNYTTPNSTYWKNLETLLSSVSSHPQLISNGFYNLSAGEEPDRVNVVALCIGDVSMDICRACVEESSRNILEVCPNQKAAIVWYDQCLLRYSGSGNYDWWMESIFNGNKASSDPNMFVEAVKSLMGRLKEEAASGNSTQKLGSGEISAGNEAVYGLVQCIPDMSSRECDRCIGEGLVLIFEARIGARIFSGGCVLRYENYIFFNWRPNASSFSSPLPTAGSKKGRGKTTAIIVIVMSIISTVVLFIGIYFVLRMKRRKCKIPSEEVQIKGIACKEATDEISNVETIQFDFETIKVATNEFSDENKLGQGGFGSVYKGKLSDGQNIAVKRLSRDSNQGDLEFKNEVLVVAKLQHRNLVRLLGFCFDGNERLLIYEYLPNASLDQFIFDLIKRTVLDWKTRYKIISGIARGLLYLHEDSRVRIIHRDLKASNILLDGKMNPKIADFGMARLFELDETQGQTRRIVGTYGYMAPEYAYHGQFSPKSDVFSFGVLILEIISGQKNVCFCDEEEDKDLLSSAWKNWRTGKPENIIDKILISSSSAEIIRCIHIGLLCVQENVVDRPTMASVVLMLNSFCLPLSLPSEPAFLYSNNYYSNARNSQTAPLPASGNGVSVSDVYPR 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 37698060 37702384 + CePI673135_04g019340.1 Cec04g1934 201416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1934 637 MobiDBLite consensus disorder prediction 618 637 - -
Cec04g1934 637 ProSiteProfiles Protein kinase domain profile. 319 593 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1934 637 ProSiteProfiles Gnk2-homologous domain profile. 10 115 IPR002902 -
Cec04g1934 637 Pfam Protein kinase domain 320 531 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1934 637 FunFam Cysteine-rich receptor-like protein kinase 10 282 394 - -
Cec04g1934 637 Gene3D Transferase(Phosphotransferase) domain 1 395 594 - -
Cec04g1934 637 ProSiteProfiles Gnk2-homologous domain profile. 117 221 IPR002902 -
Cec04g1934 637 Gene3D Phosphorylase Kinase; domain 1 283 394 - -
Cec04g1934 637 SMART serkin_6 319 594 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1934 637 CDD STKc_IRAK 325 590 - -
Cec04g1934 637 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 136 604 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec04g1934 637 SUPERFAMILY Protein kinase-like (PK-like) 307 617 IPR011009 -
Cec04g1934 637 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 9 114 - -
Cec04g1934 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1934 637 FunFam Cysteine-rich receptor-like protein kinase 28 395 596 - -
Cec04g1934 637 Gene3D - 119 221 IPR038408 -
Cec04g1934 637 Gene3D - 9 113 IPR038408 -
Cec04g1934 637 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524(InterPro)
Cec04g1934 637 Pfam Salt stress response/antifungal 16 111 IPR002902 -
Cec04g1934 637 Pfam Salt stress response/antifungal 131 219 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0484 Cec-Chr3:5132788 Cec04g1934 Cec-Chr4:37698060 1.00E-142 dispersed
Cec04g1934 Cec-Chr4:37698060 Cec04g1939 Cec-Chr4:37731780 1.10E-141 dispersed
Cec04g1933 Cec-Chr4:37690353 Cec04g1934 Cec-Chr4:37698060 1.20E-36 tandem
Cec04g1934 Cec-Chr4:37698060 Cec04g1935 Cec-Chr4:37706647 2.40E-160 tandem
Cec03g0486 Cec-Chr3:5157377 Cec04g1934 Cec-Chr4:37698060 3.40E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71945 PF00069 Pkinase 3.00E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1934 - - - 0.0