Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1939 ATGAATCTTCTACTTCCTGCAACAACGTGCTGGTCCAAAAATGAAGAGCCTGTCGAGTCACAAGCTTTGGCGCCCTCACTCAAATGCATCTTGGAGATTGTCATCCCACCGCTTTTTGTGGAATCTGATTATGTTGAGGCGATCGTGTCCCTTTACGAGATTGATAGTGACCTCTCGGATATTAAATTTGTTGCTTGTAGTGTTCCGAAGCTAGCGGAAGATTTTGGGAACATACATTTTGCTTGTGATATTTTTAGAATGCTTCCAGAAATAAGACCAATTCCTATTATATGGTTCATTTGGAATTTTCAGCAATACAAATTTCAAGTTTGTGCCATCCGGCCAGTCTTTGTCCGCCATTATTGCTTGTATGATAGAGAGAACTTCACCAGCAACAGCACGTATGAGACCAACCTCAATCGTGTCCTCTACTCCATTGCCACTGCCAAAGATAGTGACTGTGGCGTTTACAATTTTTCCTATGGTCGAAACTCAGACTCGGCCAATGCTATTGGCCTCTGCCGAGGCGATATGAAGTCTGATGTATGTCGAAGCTGCCTCAATGACTCTATATATCTTCTCACACAGTTATGTCCTCAGCAGAAAGAAGCAATTGGGTGGTTTGATAACTGCATGCTGCGCTATTCAAGCTATTCCATATTTGGTGCAATGGAAACTGGACCCGATTTCGTTATGTGGGCAACAGTCAATATAACAGAGGAAACTCTGTTCAGCAAGAAGTTAAAAAACTGCACACCTGACCTGTCTCAGCTACAATGTGATGAGTGCTTAGAGTCAGCGTTACAAGCAATCCCACCATGTTGTAGTGAAGGAATGAAAGTTTTTTCACCCAGCTGTCAAGCCAGATATGAAAGTTACCTCTTCTTTGAGCCTTCTGCTGATTCGCCGCCACCGCAGCTACCACCACCGCCATTAGAATTTACTGCTTCAACTAGCACCACGCCTACAGAAGTTCAAGAATTTAGCATCCAGAGATGCCCTTTTCTTCAGGAAAGAAGTTCAGAATACGAACTGTCATTGTGTAGTTCTTCCATTTGTGGTACTTTTGGCATTATTGACCATTGGCATCTATATCTTTTTGAGATCCAGAAAGTTGAGGGAAAGACTCGAGATCAATACACTACTTGTGAAGCTAGGGATGATGATCTTAACTCTATGGACTTCTTGCAATACGACTTTAAGACGATCAAAGATGCAACAGATGACTTTTCTACTGCAAATAAACTTGGACAAGGTGGATTTGGTATCGTTTATAAGGGTAAACTTCTTAATGGACAAGAAGTGGCTGTAAAAAGGCTAGCTCCAGGTTCTCAACAAGGAGACCTCGAGTTTAAGAATGAAGTTTTATTGGTTGCTAAGCTGCAGCACCGGAATCTGGTTCGACTTCTTGGCTTTTGTTTTGAGAGAAATGAAAGACTCCTGATCTACGAGTTTTTACCTAATTCAAGCCTAGATCGTTTCATATTTGATCCAATGCAGCGCCAATATTTGGACTGGGCAAGACGTTACAAAATTATAGTAGGCATCAGTCGTGGCCTCATGTATCTACATGAAGATTCTCGATTCAAAGTCATCCATCATGATCTTAAAGCTAGTAATATATTACTAGATGCAGAACTAAATCCAAAAATTAATGATTTTGGAATGGCAAGATTGTGTTCGTTCAATCAATCCAATGGTGATACAAGTAAAATTAAAGGAACATATGGATACATGGCCCCAGAATATGCACTGTATGGGCATTTCTCAGTAAAATTAGACGTGTTTAGTTTCGGTGTGCTTCTTCTGGAGATCATAAGTGGCCAAAAGAACGGTAGCTTTCAAGATGGTGAAAATATAGAGCATCTTTTGAGTTATACATGGGAAAACTGGACGAAAGGAACGATTACAAATATCATAGACCCAATATTGAGTGGAACTTGCATTGATGAAATCATAAGATGCATTCATCTAGGGTTATTATGTGTTCAAGAAGATGCAGCTAGCAGACCAACCATGGCTTCAGTTGTTCTCATGCTGAATAGCAACTCCTTCGCTCTTCCTGTACCATCACCCCCTGGATTTTTGCTGCATAGTAAATCATCAAACATTGCACGGCATTTTAATTCCACGGAAGGGTCGCAATTTAGCCAATCTGCCAGCATTTGTATTGAAGAAGAATCATCATATCAGTTCAACTCATTTTCTAGAAACTTGGGATGA 2223 40.76 MNLLLPATTCWSKNEEPVESQALAPSLKCILEIVIPPLFVESDYVEAIVSLYEIDSDLSDIKFVACSVPKLAEDFGNIHFACDIFRMLPEIRPIPIIWFIWNFQQYKFQVCAIRPVFVRHYCLYDRENFTSNSTYETNLNRVLYSIATAKDSDCGVYNFSYGRNSDSANAIGLCRGDMKSDVCRSCLNDSIYLLTQLCPQQKEAIGWFDNCMLRYSSYSIFGAMETGPDFVMWATVNITEETLFSKKLKNCTPDLSQLQCDECLESALQAIPPCCSEGMKVFSPSCQARYESYLFFEPSADSPPPQLPPPPLEFTASTSTTPTEVQEFSIQRCPFLQERSSEYELSLCSSSICGTFGIIDHWHLYLFEIQKVEGKTRDQYTTCEARDDDLNSMDFLQYDFKTIKDATDDFSTANKLGQGGFGIVYKGKLLNGQEVAVKRLAPGSQQGDLEFKNEVLLVAKLQHRNLVRLLGFCFERNERLLIYEFLPNSSLDRFIFDPMQRQYLDWARRYKIIVGISRGLMYLHEDSRFKVIHHDLKASNILLDAELNPKINDFGMARLCSFNQSNGDTSKIKGTYGYMAPEYALYGHFSVKLDVFSFGVLLLEIISGQKNGSFQDGENIEHLLSYTWENWTKGTITNIIDPILSGTCIDEIIRCIHLGLLCVQEDAASRPTMASVVLMLNSNSFALPVPSPPGFLLHSKSSNIARHFNSTEGSQFSQSASICIEEESSYQFNSFSRNLG 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 37731780 37736272 + CePI673135_04g019390.1 Cec04g1939 201421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1939 740 ProSiteProfiles Protein kinase domain profile. 410 686 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1939 740 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 152 695 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec04g1939 740 ProSitePatterns Protein kinases ATP-binding region signature. 416 438 IPR017441 GO:0005524(InterPro)
Cec04g1939 740 ProSiteProfiles Gnk2-homologous domain profile. 117 220 IPR002902 -
Cec04g1939 740 Gene3D - 116 220 IPR038408 -
Cec04g1939 740 Gene3D - 233 295 IPR038408 -
Cec04g1939 740 SMART serkin_6 410 686 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1939 740 FunFam Cysteine-rich receptor-like protein kinase 10 373 485 - -
Cec04g1939 740 Pfam Salt stress response/antifungal 122 218 IPR002902 -
Cec04g1939 740 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 115 220 - -
Cec04g1939 740 Pfam Protein tyrosine and serine/threonine kinase 412 677 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1939 740 Gene3D Transferase(Phosphotransferase) domain 1 486 686 - -
Cec04g1939 740 Gene3D Phosphorylase Kinase; domain 1 384 485 - -
Cec04g1939 740 CDD STKc_IRAK 416 681 - -
Cec04g1939 740 FunFam Cysteine-rich receptor-like protein kinase 28 486 688 - -
Cec04g1939 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1939 740 SUPERFAMILY Protein kinase-like (PK-like) 395 710 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0039 Cec-Chr1:315958 Cec04g1939 Cec-Chr4:37731780 7.30E-14 dispersed
Cec02g2232 Cec-Chr2:39730566 Cec04g1939 Cec-Chr4:37731780 5.40E-14 dispersed
Cec04g1934 Cec-Chr4:37698060 Cec04g1939 Cec-Chr4:37731780 1.10E-141 dispersed
Cec04g1935 Cec-Chr4:37706647 Cec04g1939 Cec-Chr4:37731780 1.10E-142 dispersed
Cec04g1937 Cec-Chr4:37720596 Cec04g1939 Cec-Chr4:37731780 7.50E-115 dispersed
Cec04g1939 Cec-Chr4:37731780 Cec10g0596 Cec-Chr10:7888022 4.60E-99 dispersed
Cec04g1938 Cec-Chr4:37726853 Cec04g1939 Cec-Chr4:37731780 2.10E-116 tandem
Cec04g1939 Cec-Chr4:37731780 Cec04g1940 Cec-Chr4:37743364 1.50E-45 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71950 PF07714 PK_Tyr_Ser-Thr 1.20E-42 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1939 - - - 0.0