Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g1985 ATGGGTTGTCCAAACTGGAATTTGTTGATGAAGATCTTAATTGGGCTGCTCTTGGTCTTCATCAACCCTTTTTGCTTTGGAGATACTGACCTCCGCGATGTTGCTGCAATCAATGCATTGTTTATTTCTCTTGGCTACCCTCCTTTGCGAGGATGGATTCTTGTGGGAGGTGATCCATGTGGGGAGAAGTGGCAAGGGGTTGGATGTGTATTCTCAAATATAACAGCGATACAACTCAGTGGCTTGAATTTGGGAGGAGAGCTAGGCACTAGCTTGGACCAATTTGAGTCAATAATATCAATGGATCTTAGCAACAATCATATTGGAGGGAATATTCCATCTACATTGCCCGCTACACTGAGAAGTTTTTCGTTATCAGCTAATCAATTCACTGGAAGCATTCCCCCTGCATTGGCCTCGCTAACACAACTAATGGACCTGTCACTAAATAATAACCTTCTTACCGGGGTAATACCTGATGTCTTCCAGCTGCTTAATGGCTTGAATAACTTGGACTTGTCAGGCAACAACTTGAGCGGTCAGCTGCCTCCCTCGATGGCTGATTTGTTCTCCCTTGCTACATTGCACTTGCAGAACAATAAACTTTCTGGGATGCTCGACGCTCTACAGGATCTTCCCTTGTCGGATTTGAATATAGAGAACAACCTATTTTCTGGACCTATACCTGCAAAGTTGTTGGGCATTCCAAATTTCAGAAAAGATGGGAACCCTTTTAATACTACGATAATTTCGTCTGCACCTGCTTTAGCCCCTTCACCATTTGCTGTTGCGCCAGTTACTGTGGGACAACCAACCAGACAGACAGGTGCAGGTCAGCCATTGTCGTCAGGGACTCCTGGATCGAATGGAGCAAGGACCTTTTTCTCTGTTAAGCGGATAATTTGGATTGTTATTATTGGCACAGTAATATTATTAGCATTGGGATTCTGTCTTCTCGTGTCGATATGTTTGAAAAGAAGCAAGCATCGAGAAGACACCGAGATTCTTCGTGACAGCGCTGATATGGCTTCTAAATATAAGCCTAAACCTACAAAGACCTCGGTTGAAGGTGATGACATGGAGAAAGGTCCAAGGGAGACCACTCTTAAGCCACTTGATAGAGACAGAATGAAGGATAGAATAATGGATTTTACCACCTCAAGGCTACATGATAGACAGGACACAAATGGGAAAAGAAAAGATGCCTCTAATATGAGTTTTCGTAAAGACCTTACGGAGAGTTCGAGCATAAGCATAGATGACTTCCCTGCACCACCTCCTCCCCCTCCTTTTCCACTCCTTTCAACTCAGGAGATTGCAAAACCAATAGTGGCAGCTGAAGTGCCCAGTAGAGTACCTAGAAAACTGAACACAAGTTCTTTAAAAGTTTTCACAATTGCGTCACTTCAGCAGTATACTAATAGTTTCTCTGAGGATAATCTTCTGGGGAGAGGCATGCTTGGCAGTGTCTATAGAGCTGAACTTCCAAGTGGGAGGCTTCTGGCTGTTAAGAAACTGGACGGATCCTCTTCAACTAATTGGAGCGATGATGAATTTCACAACCTTGTGTCTAATATATGCCAAATTCGGCACGATAACATTGTGGAGCTTGTGGGATATTGCGCTGAGCATGGACAATATCTACTCATTTATGAGTATTGTAAAAACGGCACGCTCTATGATGCGCTCCATGTCGACAAGGAGATGCATCAGAAGCTTTCATGGAATGTACGTGTGAGGATTGCACTTGGAGCTGCACGTGCCCTCGAGTATCTGCATGAAGCCTGTCAACCGCCTACCATGCACCAAAACTTTAAGTCTGCCAACATTCTCTTAGACAATGAGCTAAAACCACAAGTCTCTGACTCTGGCTTAGCTCGGCTGCTTTCTTCAGCTAGTCAGTCGGCTGCACGATTCCTCCCAGCTCATGGTTATAGTGCTCCTGAATTTGAGTTAGGAACTTACACTTACCAAAGTGATATTTTTAGCTTCGGAGTCGTAATGCTAGAGCTTCTCACCGGTCGGAAGTCCTGTGACCGATCACTGCCTCGAGGAGAACAATTTCTTGTTCGATGGGCTGTTTCAAGGCTGCATGATATTGATGCATTATCAAGAATGGTCGATCCATCTCTTAATGGCATGTATCCTGTTAAGTCGTTATCGCGCTTTGCTGATATTATTTCCTCCTGTATAATGAGAGAGCCCGAATTTCGGCCCCCAATCTCTGAGATTGTACAGGAACTCTTACAAATGCTGTAG 2259 44.27 MGCPNWNLLMKILIGLLLVFINPFCFGDTDLRDVAAINALFISLGYPPLRGWILVGGDPCGEKWQGVGCVFSNITAIQLSGLNLGGELGTSLDQFESIISMDLSNNHIGGNIPSTLPATLRSFSLSANQFTGSIPPALASLTQLMDLSLNNNLLTGVIPDVFQLLNGLNNLDLSGNNLSGQLPPSMADLFSLATLHLQNNKLSGMLDALQDLPLSDLNIENNLFSGPIPAKLLGIPNFRKDGNPFNTTIISSAPALAPSPFAVAPVTVGQPTRQTGAGQPLSSGTPGSNGARTFFSVKRIIWIVIIGTVILLALGFCLLVSICLKRSKHREDTEILRDSADMASKYKPKPTKTSVEGDDMEKGPRETTLKPLDRDRMKDRIMDFTTSRLHDRQDTNGKRKDASNMSFRKDLTESSSISIDDFPAPPPPPPFPLLSTQEIAKPIVAAEVPSRVPRKLNTSSLKVFTIASLQQYTNSFSEDNLLGRGMLGSVYRAELPSGRLLAVKKLDGSSSTNWSDDEFHNLVSNICQIRHDNIVELVGYCAEHGQYLLIYEYCKNGTLYDALHVDKEMHQKLSWNVRVRIALGAARALEYLHEACQPPTMHQNFKSANILLDNELKPQVSDSGLARLLSSASQSAARFLPAHGYSAPEFELGTYTYQSDIFSFGVVMLELLTGRKSCDRSLPRGEQFLVRWAVSRLHDIDALSRMVDPSLNGMYPVKSLSRFADIISSCIMREPEFRPPISEIVQELLQML 752
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 38050326 38054465 - CePI673135_04g019850.1 Cec04g1985 201467
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec04g1985 752 PANTHER LEUCINE RICH REPEAT KINASE 2 71 750 IPR051420 -
Cec04g1985 752 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 554 752 - -
Cec04g1985 752 ProSiteProfiles Protein kinase domain profile. 476 752 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g1985 752 Pfam Protein tyrosine and serine/threonine kinase 480 748 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g1985 752 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 256 - -
Cec04g1985 752 Gene3D Phosphorylase Kinase; domain 1 443 553 - -
Cec04g1985 752 MobiDBLite consensus disorder prediction 341 369 - -
Cec04g1985 752 Gene3D Ribonuclease Inhibitor 39 253 IPR032675 -
Cec04g1985 752 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 445 553 - -
Cec04g1985 752 Gene3D Transferase(Phosphotransferase) domain 1 554 752 - -
Cec04g1985 752 MobiDBLite consensus disorder prediction 387 407 - -
Cec04g1985 752 SUPERFAMILY L domain-like 35 237 - -
Cec04g1985 752 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515(InterPro)
Cec04g1985 752 SUPERFAMILY Protein kinase-like (PK-like) 453 748 IPR011009 -
Cec04g1985 752 Pfam Leucine Rich Repeat 98 116 IPR001611 GO:0005515(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1985 Cec-Chr4:38050326 Cec07g1541 Cec-Chr7:30982735 1.20E-118 dispersed
Cec02g0135 Cec-Chr2:1385850 Cec04g1985 Cec-Chr4:38050326 2.80E-154 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71952 PF07714 PK_Tyr_Ser-Thr 2.60E-37 CL0016 Cec PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g1985 - - - 0.0