Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2011 ATGGACGAAGAGGCTAATTCTTGGCTTAGGAGAACGAAGTTTTCTCACACAGTTTATCATCGATGGGACTCATTAAGATTAAACCCAGTTCCTTTCATCGTCGAACCACCTCGTAATTCTGGCTTGAAATCGAGGCCTACATCAGCTTCCTCCACTCAGAAACCAAATCCTGATATTTCGAAGATTCAGCGAAGCTTCATATCCAATAAACAGAGGTCTCTGTCTCCTCTTCCCGAGAGCAATCTCTCTGAAGTTTTCAAGGAAGCGAAATCCGACAGTAAGAGATTCTCAACTCCAACTCCTCGACTTAGAGAACGAACTAAGGAATTCAAGAACAAGCTATTCAATAAGGACCCTCAAGATTCAAAATCGGCCGATTCCAAGTCATCGTCGAATACCAGTCCCCTGAAACTCCTATCTTCGGGGAAAGGGGGTGATAAGTCAAAGTTCCGGAAAGATTCTTCCTGGACCAAATATTTCGATTCCGGTGGAGGAAAAGTCACCGCGGTCGAAACAGCCGAAGACTGGACTGTTGATCTCTCCAAGTTGTTTGTTGGGTTAAGGTTTGCTCATGGAGCTCACAGTCGTCTTTATCATGGAAAATACAATGATGAACCTGTTGCTGTTAAAATTATTAGGGTGCCCGAGGATGACGAAAATGGAACGCTTGCTTCTCGATTGGAGAAACAATTTACCAGAGAAGTTACCCTTTTATCTCGTCTCCATCATCCGAATGTTATAAAGTTTGTAGCTGCGAGTAGGAACCCACCTGTATACTGTGTCATTACTGAATATTTGTCCCAAGGATCATTACGGGCATACTTACACAAACTTGAGCACCAATCCCTCCCTTTGCAAAAACTAATTGAATTTGCTTTAGATGTCGCTCGTGGCATGGAATACCTTCACTCACAAGGCGTAATTCATCGGGATCTTAAGCCTGAGAATGTTCTTATTGATGAAGACTTCCACTTGAAAATTGCAGATTTTGGTATAGCTTGTCCTGAGGCCTTTTTCGACCCATTAGCTGATGATCCCGGAACTTATCGGTGGATGGCACCGGAGATGATCAAACATAAACCTTGTAGTCGAAAGGTTGATGTGTACAGCTTTGGGCTTATGTTGTGGGAAATGGTGTCTGGTGCAATTCCATACGAGGATATGACTCCCATTCAAGCAGCCTTTGCTGTTGTGAATAAGAATCTTAGGCCTGTGATTTCAAGTGATTGTCCATTGGCAATGCGGGCTTTAATCGAGCAATGTTGGTCCCTACAACCGGACAAGAGACCCGATTTCTGGCAGATTGTGAAGGTACTAGAGCAATTCGAATCTTCGCTTGCCCGTGATGGGACACTGAATTTATTAGGTAACCCTCTGTCTAGTTTCCAAGACCATAAGAAAGGGCTTCTCCATTGGATTCAAAAGCTTGGCCCCCTGCATCCTGAAACCTCGCCCTCTCCCGTGCCGAAACCGAAATTCTCGCCTGTTACAGGGGGGGTGGTTGAGTCCAGTCAAGGGAAAAGAGAAGTGTTGAAGCAATGGGGGGTTATGAGCTTAGGAGCTGATTTGTCAAAGATGGAATCTTTGAATGTGGAAAATGCACCGCCATTGGAGACCTTCCACACAATCCTCATCTCATCTCTTCCTTTATAA 1653 44.46 MDEEANSWLRRTKFSHTVYHRWDSLRLNPVPFIVEPPRNSGLKSRPTSASSTQKPNPDISKIQRSFISNKQRSLSPLPESNLSEVFKEAKSDSKRFSTPTPRLRERTKEFKNKLFNKDPQDSKSADSKSSSNTSPLKLLSSGKGGDKSKFRKDSSWTKYFDSGGGKVTAVETAEDWTVDLSKLFVGLRFAHGAHSRLYHGKYNDEPVAVKIIRVPEDDENGTLASRLEKQFTREVTLLSRLHHPNVIKFVAASRNPPVYCVITEYLSQGSLRAYLHKLEHQSLPLQKLIEFALDVARGMEYLHSQGVIHRDLKPENVLIDEDFHLKIADFGIACPEAFFDPLADDPGTYRWMAPEMIKHKPCSRKVDVYSFGLMLWEMVSGAIPYEDMTPIQAAFAVVNKNLRPVISSDCPLAMRALIEQCWSLQPDKRPDFWQIVKVLEQFESSLARDGTLNLLGNPLSSFQDHKKGLLHWIQKLGPLHPETSPSPVPKPKFSPVTGGVVESSQGKREVLKQWGVMSLGADLSKMESLNVENAPPLETFHTILISSLPL 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 38272286 38275815 - CePI673135_04g020110.1 Cec04g2011 201493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2011 550 MobiDBLite consensus disorder prediction 125 139 - -
Cec04g2011 550 SUPERFAMILY Protein kinase-like (PK-like) 168 439 IPR011009 -
Cec04g2011 550 MobiDBLite consensus disorder prediction 41 80 - -
Cec04g2011 550 FunFam serine/threonine-protein kinase HT1 268 457 - -
Cec04g2011 550 FunFam Kinase suppressor of Ras 1 172 266 - -
Cec04g2011 550 MobiDBLite consensus disorder prediction 481 500 - -
Cec04g2011 550 MobiDBLite consensus disorder prediction 85 124 - -
Cec04g2011 550 MobiDBLite consensus disorder prediction 36 151 - -
Cec04g2011 550 CDD STKc_MAP3K-like 190 439 - -
Cec04g2011 550 SMART serkin_6 183 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2011 550 Gene3D Phosphorylase Kinase; domain 1 171 267 - -
Cec04g2011 550 ProSiteProfiles Protein kinase domain profile. 183 443 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2011 550 PANTHER SERINE-THREONINE PROTEIN KINASE 88 441 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec04g2011 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g2011 550 PRINTS Tyrosine kinase catalytic domain signature 410 432 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g2011 550 PRINTS Tyrosine kinase catalytic domain signature 263 276 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g2011 550 PRINTS Tyrosine kinase catalytic domain signature 347 357 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g2011 550 PRINTS Tyrosine kinase catalytic domain signature 301 319 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g2011 550 PRINTS Tyrosine kinase catalytic domain signature 366 388 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g2011 550 Pfam Protein tyrosine and serine/threonine kinase 190 439 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g2011 550 Gene3D Transferase(Phosphotransferase) domain 1 268 458 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1470 Cec-Chr1:29367565 Cec04g2011 Cec-Chr4:38272286 2.40E-93 dispersed
Cec04g1863 Cec-Chr4:37211515 Cec04g2011 Cec-Chr4:38272286 9.70E-90 dispersed
Cec04g2011 Cec-Chr4:38272286 Cec11g1164 Cec-Chr11:23849824 8.70E-79 dispersed
Cec08g0717 Cec-Chr8:18878751 Cec04g2011 Cec-Chr4:38272286 1.50E-60 transposed
Cec03g0596 Cec-Chr3:6357934 Cec04g2011 Cec-Chr4:38272286 1.50E-167 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71953 PF07714 PK_Tyr_Ser-Thr 4.00E-60 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2011 - - - 0.0