Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2020 ATGGCTCTGAATCTCAGACTCCATACACTCACATTCCTTCTCCTTCTCTTCTCCTTCTGTACTCCATCATTTTCAGATTCAATTCCATCTCCCAATTCCCAATGCGAAGCTCAGCTGCAACAAGGCTGCCATGACAGAGCCGAGGCCCTCAAACTCAAGCTCATCGCCATCGCTTCCATTTTAGTCGCGAGCATGATCGGCGTTTGTCTTCCCCTCTTCTCTCGCGCCGTGCCGGTGCTTCAACCAGATAGAAAGCCCTTCGCAATCGTTAAGGCATTTGCCTCCGGTGTGATTCTAGCCACTGGATATATGCACGTTCTCCCCGATTCCTTCGATTGCTTGACATCCCCCTGTTTGCCAGAGAATCCATGGCGGAAATTCCCTTTCTCAACATTCATAGCAATGCTTTCCGCTGTTATGACTCTAATGTTGGACTCGTTTTCAATGAGTCGCTACAATAAAAAGTTGATGCAGGATCAAGAAGCCGCAGACGAGGAGGAGAAGAACGAGGATCGCAAGGAAATCAGTGACAATTTTGGGAAAGAAGAAGGAATAATCGAGAAAAAACTTGGTTCGCAATTGCTACGGTACCGTGTTGTTGCTCAGTTATTAGAAGCGGGGATCGTTGTGCATTCGGTGGTGATAGGGCTTTCAATGGGGGCTTCAGATAATCCGTGTACCATAAGACCGCTCATCGCTGCTCTGTGCTTTCATCAGCTGTTTGAAGGGATGGGGCTTGGAGGGTGCATTTTGCAGGCGGAATATAGGTTGAAGATGAAGGCGATAATGGTGTTTTTCTTCTCGGTTACAACGCCGTTTGGAATAGCATTGGGGATTGGGTTGTCGAATGTGTACAGTGAGAACAGTCCCACGGCTCTTATAGTTGTGGGAATTTTGAATGCTTTATCTGCTGGGTTGTTGAATTATATGGCATTGGTTGATTTGTTGGCGCATGATTTCATGGGGCCTAAATTGCAAGCCAATATCAAGCTGCAAATATGGGCTTATGTTGCTGTTTTGTTGGGCGTTGGTGGCATGTCATTGATGGCAAAATGGGCTTAG 1062 46.89 MALNLRLHTLTFLLLLFSFCTPSFSDSIPSPNSQCEAQLQQGCHDRAEALKLKLIAIASILVASMIGVCLPLFSRAVPVLQPDRKPFAIVKAFASGVILATGYMHVLPDSFDCLTSPCLPENPWRKFPFSTFIAMLSAVMTLMLDSFSMSRYNKKLMQDQEAADEEEKNEDRKEISDNFGKEEGIIEKKLGSQLLRYRVVAQLLEAGIVVHSVVIGLSMGASDNPCTIRPLIAALCFHQLFEGMGLGGCILQAEYRLKMKAIMVFFFSVTTPFGIALGIGLSNVYSENSPTALIVVGILNALSAGLLNYMALVDLLAHDFMGPKLQANIKLQIWAYVAVLLGVGGMSLMAKWA 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 38348121 38349182 - CePI673135_04g020200.1 Cec04g2020 201502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2020 353 NCBIfam ZIP zinc/iron transport family 35 353 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cec04g2020 353 Pfam ZIP Zinc transporter 50 350 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cec04g2020 353 Coils Coil 149 169 - -
Cec04g2020 353 PANTHER ZINC/IRON TRANSPORTER 49 352 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0930 Cec-Chr1:11396277 Cec04g2020 Cec-Chr4:38348121 2.00E-108 dispersed
Cec04g2020 Cec-Chr4:38348121 Cec11g1736 Cec-Chr11:31629521 7.30E-79 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2020 K14709 - csv:101204028 553.518