Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2032 ATGGAAGCTGCTGCCTCCGACGGCGAAAATCACAACCAGAATAATGATAATATTAACAAAATTAGTAACTCAAGTGAGGGTCTTAGCAAGCCCAAGCGCCAGATGAAGACTCCGTTTCAGCTTGAAACCCTCGAGAAAGCCTATGCTTTGGAGACTTACCCATCTGAGTCGACAAGGGCTGAACTATCGGAGAAATTGGGGCTCACCGATCGGCAATTGCAGATGTGGTTTTGTCATAGGAGGTTGAAGGACAAGAAGGAACCGGCAAAGAAACCCCGGAAGGTGGCACCCGCACCCCCCTTGCCGTTGCCTGATTCTCCCATTGACGAATTGAGAGTAGTGGCCGAGCCGGGTAGTGATTACGCTTCAGGGTCGGGCTCGGGTTCGAGTCCATTTGGTGATGTCGGGTTGCGTAATGTGGTACCTAGAAGTGTTGGAGATGATATGCCGATGATGAGAAGGTATTATGAACCTTCACGGTCTGTTATGGAACTTAGAGCTATTGCTTGTGTGGAGTCGCAGTTAGGAGAACCATTGAGGGAGGACGGACCTATTCTAGGGATTGAATTTGATCCACTACCACCTGATGCTTTCGGAGCACCTATAGTGGCAGAACAGCAGAAGCGATCTGGACATTCGTATGGGGACAAATATGAACAACGGGATACAAAATCAAATAAAGTGACTGCAAGGGGATTCCCCGAATATCCATTTATGCCAGACCAGTCTAATATTAGAGCTGATGTGTATGGTCCAGTTTCCCAACCACATTATCCAGATTCATTAGGCGAGGTTTCAGCAGCCAGGACACCATCATTTTTGCTTGGTCATGAACAGTTGAACAGGAGCCATAATTACCATAATCAGGTCTCAAGGGTTCGTCTTCTGTCTCAACAGGAGAAGCAGGGAGTTGCAATTCCTTCTCCTGCTGAAGACAATGCATTTGTCCCTCCAAGGGATTCTTTTGCAAGTATCAGAATCAATTCTCAGTTTACTGAACACCCAATTGTTGGACAAGAAAGTTCATATGTGTTGCCTGATGGGCATGTTTTTCCAAACGATGTCATGATTAGGATGGAAAGAAAACGCAAGAGTGAAGAAGCTCGTCTGAGTAAAGAAGCTGAAGCCCACGAAATAAGAATGCGGAAAGAGCTTGAGAAACAAGATATTTTGAGGAGAAAGAATGAAGAACGAATGAGGAAAGAAATGGAAAAGCAAGATCGCGAAAGAAGGAGGGAAGAGGAGAGGTTACTGCGAGAAAAGCAGCGGGAAGCCGAGAGATTAAAGCGTGAGGAAAGACGTGAACATGAACGGAGGGAAAAGTTTCTGCAGAGGGAGTATGTGAGGGCTGAAAAGAGGAAACAAAAAGAAGCTATTCGCAAAGAGAAGGAAGCTGTGAGACGCAAAGCTGCTATTGAGAAGGCTACTGCTCGTAGAATTGCCCGTGAGTCTATGGAGCTTATTGAGGACGAACAGCTTGAACTGATGGAACTGGCTGCTGCAAACAAAGGATTACCCTCCATATTAAGTCTTGATCATGACACTTTGCAGAATCTTGAATCTTTCCAAGATTATCTAGGTGCATTTCCACCCAAGTCCGTGCAATTGAAAAAACCTTTCGGCATTCAACCTTGGATCAATTCAGAGGAGAACATCGGTAACCTTCTCATGGTCTGGAGATTTTTTATTACATTTTCTGATGTTCTAGAGCTGTGGCCCTTTACTCTTGATGAGTTTGTTCAAGCTCTTCATGACTATGATTCAAGATTACTGGGTGAGATTCACATTTGCCTTTTGAGACTGATTGTAAAAGATATTGAAGATGTTGCAAGAACACCTTCTGCTGGAATGGGAATGAACCAGAATGGTGTTGCCAACTCTGGAGGTGGACACCCACAGATTGTTGAAGGGGCATATGCGTGGGGGTTTGACATTTGCAACTGGCAGAAGCATCTAAACCCGTTAACATGGCCTGAAATATTTCGACAATTAGCACTATCAGCTGGATTTGGACCTCAGTTGAGAAAGAGGAGTTTGGCAATGTCTGAAATGCGTAGCAATGATGAGGCTAAATGTGGTGAGGACGTAGTCTCTATTCTACGCAATGGTTCAGCAGCTGAAAATGCATTTGCTATCATGCAAGAGAAAGGTTTGTTAGCCCCTCGGAGATCTAGGCATCGGCTAACTCCTGGAACTGTGAAATTTGCTGCTTTTCATGTCCTTTCCCTAGAAGGCAGTGAGGGGTTAACAGTACTAGAACTTGCAGAGAAGATACAGAGATCTGGACTTAGAGATCTGTCTACAAGCAAGACACCAGAGGCTTCCATTTCTGTTGCTTTGACAAGGGATACTAAGCTTTTTGAAAGAATAGCTCCTTCCACATATCGTGTACGAGCTCCCTATAGGAAGGATCCAGATGATGCCGAGGAAATACTTTCAGTAGCCAGAAAGAAAATTCAGGTATTCCAGAATGGGTTTTTGGCTGGAGAAGATGCTGATGATGTTGAAAGAGATGAAGAATCTGAATGTGATGATGTTGATGAAGATCCTGAGGTTGATGATATAGCGACAACTTCCTTGGTGAATGAAGATATTAGCAAAGGAGATGCTAACTTAGGAGTTGAGAATGAGAACTTATGTCATGATATTGCTGGAAATCCTCAAAATGAAATTGCCAAAGATATATCGCCGTTCCCCCTAAGTGGCTCTAAGGACACAAAATATTTAAATATACCTACAGAGCAGTATGCTGCTGTTGATGAGACTACTATTAGCGATCTTGATCAAGAAAATATGGAGATTGATGAAAGCAAGGAAGGCGAATCATGGATTCAAGGACTTACAGAAGGTGAATATCATGATCTTAGTGTTGAGGAGCGCTTGAATGCCCTTATTGTCTTGACCAGCATTGCAAATGAAGGAAACTCTATTCGCCTTGTTCTTGAGGATCGCTTGGAAGCTGCAAATGCTGTTAAGAAGCAAATGTTGACAGAGGCTCAGATTGATAAATCTCGCCTAAAAGAAGAGATCATTACTAAATCTGATTTTCCAATTCATATAGTGAGCAAGGTGGAAACTGAACTCAATGGTTCCACTATGGACGGTGGGCAAAGCCCTTTTCCTGTTACCGATAATAAGAACAATGAAACAACCCCAAGCACTGCAGAAAACTTTGGTAGTGTGCCTAATGAGAGGGGTACTTTAGTGCCAGATCTTTTCCCAGGCCCAGATAATTTCTTGGCTCAGCAATGTGGACATGCTTCAAAGAGGTCACGTTCACAGTTAAAATCTTATATTGCCCATAGAGCTGAAGAAATGTACACATACAGGTCTTTGCCTTTAGGTCGAGATCGTAGGCGTAATCGGTACTGGCAATTTGTTGCATCTTCCTCAAGCAATGATCCTGGTTCTGGGAGAATCTTTGTTGAAATGTATGATGGAAAGTGGAGGCTTATTGATTCTGAAGAGGGTTTTGATGCTCTTTCGTTGGCTTTGGACACACGCGGGATTAGAGAATCACACCTACGCATAATGTTGCAAATGATAGAGACATCATTTAAGGAAAATATTCGGAGGAATCTGCAGTGTGCCAATGATATGGTTCGAAGTGGAATTATTCCTAAAAATGAAAATGATGATTCGAGTTCTAGTCCTGATTGCAACACTGGTTTTAACAGTCCTAGCAGTACTGTTTGCGGATTAAATTTGGATACAATGGCAACATCATCTTCGTTCAGAATTGAGCTTGGGAGAAATGAAAACGAAAAGAAGGCTGCATTTAGAAGGTATCAAGACATGCAGAGGTGGATGTTAAGAGAGTGCTTTAGCACATCAACACTGTGTGCCATGAAATTTGGAGAAAAACGGTGCACTTCAGTGTTGGACATTTGTGATTCTTGTCTGTGCTTGTTTGATTCTCAACATTCTCACTGTCCTTCGTGCCATCAAACTTTTGGCATTAGTGGGAATGATATTAATTTTCTAGAACACATACGTCACTGTGAGAGGGAAAGGAAGTCTAACCCTTTGGATACACACGTTTTAGATGCATGTCTTCCCCTCAAAAGTAGGTTGCTCAAGGCTCTCCTAGCTTTCATTGAGGTACATGTTCCGTCGGAAGCTTTTCAATCGTTTTGGACAGAACATAGGAAAGATTGGGGTGTCAGGATGAAATTATCATCATCCATTGAGGAGCTGCTACAGATATTGACCTTGTTTGAAAGTGTAATTAAGCGGGACTTTCTAAAATCAGACTTTACTACAACTGACGAGCATCTGAGCTCATGTTCCATCTCTGGGAATGTTATACATGACCCAGCAGATATTGGGTCTGTTCTTACATTACCGTGGATTCCACGGACTAGTGCAGCTGTTGCTTTAAGGCTTTATGAGGTAGATGCATCAATTTATTATATTGGATGTGAGAAACCAGAGCCCGACCAGGATAAGGAAGTTGGAGAACATATAAACTTTTCCAGTAGATATGTCCAGGTTAAGAATGATGAACGGACTAAACTAAACGAGTTGGATTATGATGATCTGATGAAGAATGAAAACTCAGCCGATCCAAAAAGTTTAAGGAACAGCTACAAACGTGGTCGAGGTAGTCGAGATTATGGACGTCGTAGAAAGTGGCAGAAAAAAGTTAATGGATCCAGATCTGGCCGGGTCCGGCCAAATGTCAAGAGTAATGAGACGATGAATCAAGAACAGAGGGAACTGGGACAAGGAACACAGGTTATGGGTGTACGAGGCCGCCGTACGGTAAGGAAGAGAAGGGCTGAGAAGAGCACTCCAGATGAAAGACTGTTGGGGCTGGTGCCTGGTAGTAGTACTCAGAACATAGATGAATCCCCAAAAGATTATCTAGGGGAATGGGAGGACGAAAAAATGGATAGGTTCGTCGATATGGAGGATGAAGAGAACGTGATGGAAGATGAAGAAAATGTGATGGAAGATGAGGAGAATGAAGAGAATGTAAACAACGTAGAAGCGATGGACTCCGATGATGATGGCCAGGGAGTTGGGTATGAGCAAGGGGGCTGGGAGTTTGGCTTTGAAGGCACTTCCAACAGATGGAATGGTGATTTAGGGTTGGGTAGCGATGAGGATGTGGATTTATCTGAGGACTACAATGGCACTGAAGAAGGGGGAAATGATGATATAGAGGAGTTAGATGTTGATAGCAGCGAAGAGTCGGATTGTTCACCAAATAGGATAGGCAACAATGGTGGAGGAGAATCCGCTGTTTCAGACGACTATAGCGATTAA 5271 43.31 MEAAASDGENHNQNNDNINKISNSSEGLSKPKRQMKTPFQLETLEKAYALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKKEPAKKPRKVAPAPPLPLPDSPIDELRVVAEPGSDYASGSGSGSSPFGDVGLRNVVPRSVGDDMPMMRRYYEPSRSVMELRAIACVESQLGEPLREDGPILGIEFDPLPPDAFGAPIVAEQQKRSGHSYGDKYEQRDTKSNKVTARGFPEYPFMPDQSNIRADVYGPVSQPHYPDSLGEVSAARTPSFLLGHEQLNRSHNYHNQVSRVRLLSQQEKQGVAIPSPAEDNAFVPPRDSFASIRINSQFTEHPIVGQESSYVLPDGHVFPNDVMIRMERKRKSEEARLSKEAEAHEIRMRKELEKQDILRRKNEERMRKEMEKQDRERRREEERLLREKQREAERLKREERREHERREKFLQREYVRAEKRKQKEAIRKEKEAVRRKAAIEKATARRIARESMELIEDEQLELMELAAANKGLPSILSLDHDTLQNLESFQDYLGAFPPKSVQLKKPFGIQPWINSEENIGNLLMVWRFFITFSDVLELWPFTLDEFVQALHDYDSRLLGEIHICLLRLIVKDIEDVARTPSAGMGMNQNGVANSGGGHPQIVEGAYAWGFDICNWQKHLNPLTWPEIFRQLALSAGFGPQLRKRSLAMSEMRSNDEAKCGEDVVSILRNGSAAENAFAIMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSEGLTVLELAEKIQRSGLRDLSTSKTPEASISVALTRDTKLFERIAPSTYRVRAPYRKDPDDAEEILSVARKKIQVFQNGFLAGEDADDVERDEESECDDVDEDPEVDDIATTSLVNEDISKGDANLGVENENLCHDIAGNPQNEIAKDISPFPLSGSKDTKYLNIPTEQYAAVDETTISDLDQENMEIDESKEGESWIQGLTEGEYHDLSVEERLNALIVLTSIANEGNSIRLVLEDRLEAANAVKKQMLTEAQIDKSRLKEEIITKSDFPIHIVSKVETELNGSTMDGGQSPFPVTDNKNNETTPSTAENFGSVPNERGTLVPDLFPGPDNFLAQQCGHASKRSRSQLKSYIAHRAEEMYTYRSLPLGRDRRRNRYWQFVASSSSNDPGSGRIFVEMYDGKWRLIDSEEGFDALSLALDTRGIRESHLRIMLQMIETSFKENIRRNLQCANDMVRSGIIPKNENDDSSSSPDCNTGFNSPSSTVCGLNLDTMATSSSFRIELGRNENEKKAAFRRYQDMQRWMLRECFSTSTLCAMKFGEKRCTSVLDICDSCLCLFDSQHSHCPSCHQTFGISGNDINFLEHIRHCERERKSNPLDTHVLDACLPLKSRLLKALLAFIEVHVPSEAFQSFWTEHRKDWGVRMKLSSSIEELLQILTLFESVIKRDFLKSDFTTTDEHLSSCSISGNVIHDPADIGSVLTLPWIPRTSAAVALRLYEVDASIYYIGCEKPEPDQDKEVGEHINFSSRYVQVKNDERTKLNELDYDDLMKNENSADPKSLRNSYKRGRGSRDYGRRRKWQKKVNGSRSGRVRPNVKSNETMNQEQRELGQGTQVMGVRGRRTVRKRRAEKSTPDERLLGLVPGSSTQNIDESPKDYLGEWEDEKMDRFVDMEDEENVMEDEENVMEDEENEENVNNVEAMDSDDDGQGVGYEQGGWEFGFEGTSNRWNGDLGLGSDEDVDLSEDYNGTEEGGNDDIEELDVDSSEESDCSPNRIGNNGGGESAVSDDYSD 1756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 38431422 38443611 - CePI673135_04g020320.1 Cec04g2032 201514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2032 1756 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677(InterPro)
Cec04g2032 1756 MobiDBLite consensus disorder prediction 1 38 - -
Cec04g2032 1756 Coils Coil 391 469 - -
Cec04g2032 1756 MobiDBLite consensus disorder prediction 1536 1551 - -
Cec04g2032 1756 CDD homeodomain 32 87 IPR001356 GO:0003677(InterPro)
Cec04g2032 1756 MobiDBLite consensus disorder prediction 1734 1756 - -
Cec04g2032 1756 MobiDBLite consensus disorder prediction 206 237 - -
Cec04g2032 1756 Pfam DDT domain 550 605 IPR018501 -
Cec04g2032 1756 MobiDBLite consensus disorder prediction 84 107 - -
Cec04g2032 1756 Pfam Homeodomain 30 86 IPR001356 GO:0003677(InterPro)
Cec04g2032 1756 MobiDBLite consensus disorder prediction 1515 1535 - -
Cec04g2032 1756 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 938 981 IPR028942 -
Cec04g2032 1756 MobiDBLite consensus disorder prediction 210 228 - -
Cec04g2032 1756 MobiDBLite consensus disorder prediction 1515 1619 - -
Cec04g2032 1756 MobiDBLite consensus disorder prediction 1645 1756 - -
Cec04g2032 1756 MobiDBLite consensus disorder prediction 396 416 - -
Cec04g2032 1756 Gene3D - 21 97 - -
Cec04g2032 1756 ProSiteProfiles DDT domain profile. 549 608 IPR018501 -
Cec04g2032 1756 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1109 1181 IPR028941 -
Cec04g2032 1756 SMART HOX_1 29 91 IPR001356 GO:0003677(InterPro)
Cec04g2032 1756 MobiDBLite consensus disorder prediction 1702 1731 - -
Cec04g2032 1756 MobiDBLite consensus disorder prediction 7 31 - -
Cec04g2032 1756 MobiDBLite consensus disorder prediction 1556 1576 - -
Cec04g2032 1756 Coils Coil 1637 1657 - -
Cec04g2032 1756 ProSiteProfiles HARE-type HTH domain profile. 731 800 IPR007759 GO:0006355(InterPro)
Cec04g2032 1756 SMART testlast3 549 608 IPR018501 -
Cec04g2032 1756 MobiDBLite consensus disorder prediction 1645 1665 - -
Cec04g2032 1756 SUPERFAMILY Homeodomain-like 21 87 IPR009057 -
Cec04g2032 1756 Pfam HB1, ASXL, restriction endonuclease HTH domain 731 798 IPR007759 GO:0006355(InterPro)
Cec04g2032 1756 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1756 IPR044977 GO:0006357(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0012 Cec-Chr2:147720 Cec04g2032 Cec-Chr4:38431422 1.40E-07 transposed
Cec02g2406 Cec-Chr2:41281181 Cec04g2032 Cec-Chr4:38431422 5.30E-16 transposed
Cec09g1043 Cec-Chr9:10100379 Cec04g2032 Cec-Chr4:38431422 3.70E-51 transposed
Cec02g0251 Cec-Chr2:2372539 Cec04g2032 Cec-Chr4:38431422 1.00E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29427 PF15613 WSD 3.50E-13 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2032 - - - 0.0