Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2033 ATGGAGTCCCAGTTGCTCTCACGCGCCACTTCCTTCGCCGGCGGCATTCCCACTCTCCGCAAGTTGCACAGAGACACCACCACTAACAACAACCATGTCGCCTTCGTCCACACCAGGCCCATCGCCGAGGGAGCCAACTTGATCTGGGGAAGACAACTCCGCCTCTCTTTACTGCTCGATACGCCGCATCTACTCTCCGCTAAACGGGAGACGATTCACCCTACCTTTGCGGCGGCCTCCTCTTCTTCCGCCGGAGGTAGCGATTCCGCCGGGGAGGCGAAGGTTACTCCGGTGGGGTTCTTAGAGAAGTATCCGGCGTTGGTCACCGGATTCTTCTTCTTTATGTGGTACTTCCTGAACGTGATTTTCAATATCCTCAACAAGAAGATATATAATTACTTCCCCTATCCATATTTTGTGTCGGTGATCCATTTATTGGTTGGGGTGGTGTACTGTTTGATAAGCTGGGCTGTGGGTCTTCCTAAGCGAGCACCTATTGATTCAACCCTCCTGAAGTTGCTGATCCCTGTAGCTTTCTGTCATGCACTTGGCCATGTCACTAGCAATGTCTCATTCGCGGCTGTTGCTGTCTCATTCACTCATACAATCAAAGCTCTGGAACCGTTCTTTAACGCTGCCGCTTCTCAATTCATTTTGGGGCAACCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCATTGGTGTGTCAATGGCATCCTTGACTGAGCTTTCATTTAACTGGACTGGTTTCATTAGTGCTATGATTTCCAATATCTCCTTTACCTACAGAAGTATTTATTCAAAGAAAGCCATGACTGACATGGACAGCACCAACGTTTATGCCTACATTTCCATTATTGCTCTCCTTTTCTGCATTCCACCTGCTGTAATTGTGGAAGGGCCTCAACTGCTGAAGTTTGGTTTCAATGATGCCATAGCCAAAGTTGGTCTAACCAAATTCGTTTCAGATCTCTTCTGGGTAGGGATGTTTTATCATCTTTACAATCAGTTAGCGACCAACACCTTAGAGAGGGTGGCACCACTTACCCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTATCTTTGGTAACAAAATCTCTACACAGACTGGTATTGGAACCGGCATTGCAATTGCAGGAGTAGCACTTTACTCTTACATCAAGGCTAAGATGGAAGAAGAGAAACGATTTTATTGTTTGGACAGCGAACAAAGGTGGCTTGAAGAAGCATGGGATGGAGGTGACGGGAAGCATGGAATTGAGAGGAGGATTCGGATCGTCCATGAGGTCACAAAAGAAGGAATGAGGCCGACTCATAAATCCAATACAAACATGAAGGTGTCCCAATGGGTCAAGCCACGAGATTTCCTTGGGATTATTACTTAG 1416 46.96 MESQLLSRATSFAGGIPTLRKLHRDTTTNNNHVAFVHTRPIAEGANLIWGRQLRLSLLLDTPHLLSAKRETIHPTFAAASSSSAGGSDSAGEAKVTPVGFLEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLISWAVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQPIPITLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKFGFNDAIAKVGLTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSYIKAKMEEEKRFYCLDSEQRWLEEAWDGGDGKHGIERRIRIVHEVTKEGMRPTHKSNTNMKVSQWVKPRDFLGIIT 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 38445239 38450217 - CePI673135_04g020330.1 Cec04g2033 201515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2033 471 Pfam Triose-phosphate Transporter family 108 395 IPR004853 -
Cec04g2033 471 PANTHER SOLUTE CARRIER FAMILY 35 100 399 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cec04g2033 471 SUPERFAMILY Multidrug resistance efflux transporter EmrE 324 396 - -
Cec04g2033 471 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 405 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2033 Cec-Chr4:38445239 Cec05g2595 Cec-Chr5:36826736 2.40E-149 dispersed
Cec04g2033 Cec-Chr4:38445239 Cec04g1920 Cec-Chr4:37587002 4.40E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2033 K15283 - csv:101220728 736.102