Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2035 ATGCCTTTATGGCCCTTCCTCTTCCTCTTCTGTTTCCCTCTGTTTTCCTTCTCCCTCAACCAAGAGGGTTATGTTCTCTACACCTTTAAGCGCTCCGTTGAGGATCGTAAAAATGTCTTCTCCACTTGGCACGAAGCCGACCCCGATCCCTGTTCATGGGATGGCATCACCTGCGACGCCCATCATCACGTTATTTCTGTTGATCTCTCTAGCTCTCGTATTTCTGCTTCTTTCCCTCTTCAACTCTGTAAGCTTCCGCATCTCCTCTACCTTTCTCTTTACAACAATACCTTCCATTCCCTTCTTCCCGCTGGGATTTCCAATTGTAGCAGCCTCGAGTTTCTTGACCTTAGTCAAAATCTCCTCACCGGTCCTCTGCCTCCCTCCATTGCTGATTTGCCCAATATCCGATACTTGGATTTGTCTGGCAACAATTTCTCCGGCGAAATACCACCCTCCTTCGGTCGGTTTCGGAAACTTGAGGCGTTTTCAATTGTTTTGAATCTTATGAGTGGTACAATTCCTCCGTTTCTTGGTAACATTACTACTCTTAGGATGTTGAATATGTCTTACAACTCGTTTTCGCCCGGAAGAATCCCGCCGGAGCTGGGTAGTCTGGTGAATCTTGAGGTTCTTTGGTTGACGGCTTGTAACTTAGTGGGGGAGATTCCTGAGTCGCTGATAGGTCTGGAGCAACTTGTTCTTCTAGATTTGAGCATTAACAATCTTACTGGGCCGTTCCCGCGGGCGCTGACCGAGTTAACCCACGTGACCCAGATTGAGTTATTTGGCAATAAGTTAACCGGCGTGTTACCGAATGAGTTTTCGAAACTCAAGTCGCTGCGGTTGTTCGACATCTCGATGAATAATCTCGCTGGGCCAATTCCGGGTAGCTTGTTTGAGTTGCCGCTTGAAAGTCTTAATGCGTTTGAGAATAATTTCGAGGGGAGCTTGCCGGAAAGCATAGGGGCGTCGAGGACTTTGAGAGAGATAAAGCTATTTGCGAACAGATTCACAGGGTCTTTACCAACACATTTGGGGAAATATTCACCTCTAGAATCGTTGGACATTTCGGACAACTTCTTTTCCGGCAGGCTCCCCGAGAACTTGTGTGAGAAGGGGGCATTGATAGAGATAATGTTGATCAACAACCTGTTTTCAGGCGAACTCCCGTCGAGTCTTGGTAATTGTCAGAGTCTGACCAGGATGCGATTAGGGAACAACAATTTTACGGGTTCTGTACCAGAAAATGTATGGGGACTTTCAGATGTTGCTCTTATGGAACTTGCAAACAACTCCTTCTCTGGCCCAATCTCAAAGAAAATAGCCAACGCCAAGATGCTGAATTTGCTTCTTATTTCTAATAACAATTTCTCAGGAACAATTCCAGAGGAGATTGGTTCTTTGGAGAACATGGTAGAGTTTTCCGCCGACCATAACAAGTTCATAGGAAATATCCCTGAAAACCTTACAAAAATGGATCGACTTGCTAAGTTAGATCTTCAAAACAACAGACTTTCGGGGTTGCTCAACTACAGGCTTGATGCCTGGGAGAGACTGAATGAGCTCAATCTGGCCAATAATAACTTCTCTGGGCCAATTCCCCGGGAAATTGCTAGCTTGCCAGTGCTTAATTACCTCGATCTTTCAGGCAATCAATTTTCTGGGGAAATCCCAAATGGGTTACAGAATTTGAACCTCAATGTTCTGAATCTGTCATACAACCAATTAACTGGGACACTTCCTTCCTATTTCGAGAGATCAATGTACAAAAATAGCTTTCTAGGCAATCCTGATTTATGTAGGGAGGAAAACGATGCGTGTCATACAGTTCAGTCTACAAGAAATGAAGGAGGAGGAGGAGGTTGTGATGAGGGAGGAGGTTGCATTTGGCTGCTGCGATCCGTCTTTGTATTTGCAGGTTTAATTTTCTTTGTGGGAGTGGTTCTATTCCACATCAAGTACAGGACATTCGTCAAGGCAAGAAGTCTCAACATCAAATCAAAATGGACAATGATATCGTTCCAAAAGCTCTCTTTTGGTGAGGACGAGATTGTGGGTTCCCTAGATGAACACAATGTGATAGGCAGTGGAGGCTCTGGCCTAGTTTACAAGGTTGCTCTCGCCAATGGCGAAACCATTGCAGTTAAGAAACTTTGGCCCGAGCTGCCCAATGACTGCCTGAGCATCGATCTGGAGAAAAATTGGACTGAAATTAATGCTTTTGATGCAGAAGTGAAGACTTTGGGTGAAATCAGGCACAAAAACATAGTGAAACTTTTGTGTTGTTGTACCAATGGAGACTGCAAGCTTTTGGTCTTTGAATACATGCCTAATGGGAGCTTAGGTGATATGCTTCATGGTAGTAGAAGTGAGTTATTGGATTGGCCAACACGATACAAGATAGCCTTGGATGCTGCTGAGGGGCTTTCTTATCTTCATCATGATTGTGTTCCTCCAATTGTACACAGAGATGTCAAGTCCAATAACATTTTGTTGGATGCTGAATTCGGAGCTAAGATAGCAGATTTTGGAGTAGCTATGGCTGTCGATATATCCCAGGGTAAATCCATGTCAGTGATTGCTGGTTCTTGTGGCTATATTGCCCCAGAGTATGCTTATACATTGAAAGTGAACGAGAAGAGCGACATCTTTAGCTACGGGATGGTTATCCTTGAATTGATAACGGGGAAGCGGCCGATCGACTCCGAGTTCAAAGAAAATGATCTGGTGAAATGGGTATGCACCACTTTAGAAGAAGAAGGCGTCAACCATATTCTAGACCCCAAATTGGATTCGTGTCACCAGGAGGAAATGTTGAAGGTCCTCAACATTGGCCTCCTATGCAGCAGTCCTCTACCTATCAACCGCCCATCCATGAGACGAGTGGTTACAATGTTGTTAGAAGTTCGCACGGATAGCAATTCGAAGATTGGAAGGAGAAAGGGAAGATTGACACCATATTATTTCGACGATGTTTCGGATAGTGGAAATGTGGTATAG 3003 44.62 MPLWPFLFLFCFPLFSFSLNQEGYVLYTFKRSVEDRKNVFSTWHEADPDPCSWDGITCDAHHHVISVDLSSSRISASFPLQLCKLPHLLYLSLYNNTFHSLLPAGISNCSSLEFLDLSQNLLTGPLPPSIADLPNIRYLDLSGNNFSGEIPPSFGRFRKLEAFSIVLNLMSGTIPPFLGNITTLRMLNMSYNSFSPGRIPPELGSLVNLEVLWLTACNLVGEIPESLIGLEQLVLLDLSINNLTGPFPRALTELTHVTQIELFGNKLTGVLPNEFSKLKSLRLFDISMNNLAGPIPGSLFELPLESLNAFENNFEGSLPESIGASRTLREIKLFANRFTGSLPTHLGKYSPLESLDISDNFFSGRLPENLCEKGALIEIMLINNLFSGELPSSLGNCQSLTRMRLGNNNFTGSVPENVWGLSDVALMELANNSFSGPISKKIANAKMLNLLLISNNNFSGTIPEEIGSLENMVEFSADHNKFIGNIPENLTKMDRLAKLDLQNNRLSGLLNYRLDAWERLNELNLANNNFSGPIPREIASLPVLNYLDLSGNQFSGEIPNGLQNLNLNVLNLSYNQLTGTLPSYFERSMYKNSFLGNPDLCREENDACHTVQSTRNEGGGGGCDEGGGCIWLLRSVFVFAGLIFFVGVVLFHIKYRTFVKARSLNIKSKWTMISFQKLSFGEDEIVGSLDEHNVIGSGGSGLVYKVALANGETIAVKKLWPELPNDCLSIDLEKNWTEINAFDAEVKTLGEIRHKNIVKLLCCCTNGDCKLLVFEYMPNGSLGDMLHGSRSELLDWPTRYKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDAEFGAKIADFGVAMAVDISQGKSMSVIAGSCGYIAPEYAYTLKVNEKSDIFSYGMVILELITGKRPIDSEFKENDLVKWVCTTLEEEGVNHILDPKLDSCHQEEMLKVLNIGLLCSSPLPINRPSMRRVVTMLLEVRTDSNSKIGRRKGRLTPYYFDDVSDSGNVV 1000
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 38457804 38460991 + CePI673135_04g020350.1 Cec04g2035 201517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2035 1000 SUPERFAMILY L domain-like 42 302 - -
Cec04g2035 1000 SMART serkin_6 689 989 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2035 1000 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 970 IPR050647 -
Cec04g2035 1000 Gene3D Ribonuclease Inhibitor 18 168 IPR032675 -
Cec04g2035 1000 Gene3D Ribonuclease Inhibitor 169 267 IPR032675 -
Cec04g2035 1000 SUPERFAMILY L domain-like 336 588 - -
Cec04g2035 1000 ProSitePatterns Protein kinases ATP-binding region signature. 695 718 IPR017441 GO:0005524(InterPro)
Cec04g2035 1000 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 271 - -
Cec04g2035 1000 FunFam Receptor-like protein kinase HSL1 303 610 - -
Cec04g2035 1000 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 777 983 - -
Cec04g2035 1000 Pfam Leucine rich repeat 495 554 IPR001611 GO:0005515(InterPro)
Cec04g2035 1000 Pfam Leucine rich repeat 86 146 IPR001611 GO:0005515(InterPro)
Cec04g2035 1000 Pfam Leucine rich repeat N-terminal domain 19 59 IPR013210 -
Cec04g2035 1000 SMART LRR_typ_2 254 277 IPR003591 -
Cec04g2035 1000 SMART LRR_typ_2 133 157 IPR003591 -
Cec04g2035 1000 SMART LRR_typ_2 206 230 IPR003591 -
Cec04g2035 1000 SMART LRR_typ_2 493 516 IPR003591 -
Cec04g2035 1000 SMART LRR_typ_2 85 109 IPR003591 -
Cec04g2035 1000 SMART LRR_typ_2 541 564 IPR003591 -
Cec04g2035 1000 SMART LRR_typ_2 278 302 IPR003591 -
Cec04g2035 1000 Pfam Protein kinase domain 691 916 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2035 1000 Gene3D Ribonuclease Inhibitor 268 612 IPR032675 -
Cec04g2035 1000 Gene3D Transferase(Phosphotransferase) domain 1 777 987 - -
Cec04g2035 1000 SUPERFAMILY Protein kinase-like (PK-like) 685 967 IPR011009 -
Cec04g2035 1000 Pfam Leucine Rich Repeat 208 229 IPR001611 GO:0005515(InterPro)
Cec04g2035 1000 Pfam Leucine Rich Repeat 352 371 IPR001611 GO:0005515(InterPro)
Cec04g2035 1000 Pfam Leucine Rich Repeat 566 586 IPR001611 GO:0005515(InterPro)
Cec04g2035 1000 Pfam Leucine Rich Repeat 448 469 IPR001611 GO:0005515(InterPro)
Cec04g2035 1000 Gene3D Phosphorylase Kinase; domain 1 668 776 - -
Cec04g2035 1000 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 19 178 - -
Cec04g2035 1000 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g2035 1000 ProSiteProfiles Protein kinase domain profile. 689 968 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2035 Cec-Chr4:38457804 Cec10g0784 Cec-Chr10:12784637 6.60E-93 dispersed
Cec11g1547 Cec-Chr11:29759261 Cec04g2035 Cec-Chr4:38457804 5.20E-82 dispersed
Cec03g1670 Cec-Chr3:34896277 Cec04g2035 Cec-Chr4:38457804 1.10E-74 transposed
Cec02g0250 Cec-Chr2:2357656 Cec04g2035 Cec-Chr4:38457804 1.50E-134 wgd
Cec03g0616 Cec-Chr3:6581015 Cec04g2035 Cec-Chr4:38457804 4.20E-156 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71954 PF00069 Pkinase 3.60E-41 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2035 - - - 0.0