Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2056 ATGACGGCCGACAAGATTTTCGTAATGTACAGATGTCGCAAAGGAGTGCCGTCTTTTCCTCCGCCGCGAGAGATGAAAGCCGACCCATTTCTCGATCAAAGAGTTCGTTCCCATGTCGCTGATATAAGCACTTCGTTTGCGAAGATGGGTTCTGGTCGTTGGTTTAAGGCAGTAATTCGCTTAAAGAAAGTGAAAACCTGCAGTTCAAAACAAACTAAGGAGAAATTGGATGATTTGCAAAAAGATTCCCCAAGGTTTAAAAATGGTGGCACCAATGGGAATAGTAAGTCTCTTGGGATGCCAATTGAAGATGTAGCGGCAGTTCGGATTCAGACAGCATACCGAGCATATCGTGCCAGGAAAAATTTACGTCGCTTGAAAGGGGCCTTCAGACTGCAGAATCTGACTCAAGGCAATTCCGTTAGAAAGCATGCTACATCTACATTAGGCTATCTTCATTCATGGAGCAATATACAGGCTCAAATTAGGGCTCGTCGACTTTGTATGGTGACAGAAGGACGACTAAGACAAAAAAGATTAGAAAATCAACGAAAACTTGAGGCTAAGCTTCATCATATAGAGGTGGAGTGGTGTGGGGGTGCAGACTCCATGGATGGGATTCTTTCGAGGATACATGAGAGAGAAGAAGGGGCGGTTAAGCGCGAGCGTGCTATGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCCAATGAGATGTATGGGTTGGGTAAAGATGAACTTGGTAAAGCTGATTGGGGTTGGAGCTGGAAAGAACGATGGATAGCTGCTCGTCCGTGGGAAAGCCGTGTACCATCTCAGTTCGATAGTCCAAAGAAATCTACAATTAGGCAATCAAGCAAAGTCAGTAAGAGAAACTCGCCATCCCCTAAAGCACGAGTTTCAATTAAACCTCCTTCCCCAAATGTGAAATCAACTTCAAAGGCTCGAAGGTTGTCTTATCCAGCAACCGAGAAAACCGAAGAACTGGCTACAGAAGAAAAAGGCGTCAAAGAAAGCGTTAAAAACAAAGGGAACACTAAGAAAGAAGAAACAGCATCCTAA 1065 44.41 MTADKIFVMYRCRKGVPSFPPPREMKADPFLDQRVRSHVADISTSFAKMGSGRWFKAVIRLKKVKTCSSKQTKEKLDDLQKDSPRFKNGGTNGNSKSLGMPIEDVAAVRIQTAYRAYRARKNLRRLKGAFRLQNLTQGNSVRKHATSTLGYLHSWSNIQAQIRARRLCMVTEGRLRQKRLENQRKLEAKLHHIEVEWCGGADSMDGILSRIHEREEGAVKRERAMAYAFSHQWRANSNEMYGLGKDELGKADWGWSWKERWIAARPWESRVPSQFDSPKKSTIRQSSKVSKRNSPSPKARVSIKPPSPNVKSTSKARRLSYPATEKTEELATEEKGVKESVKNKGNTKKEETAS 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 38622094 38627891 + CePI673135_04g020560.1 Cec04g2056 201538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2056 354 MobiDBLite consensus disorder prediction 270 354 - -
Cec04g2056 354 MobiDBLite consensus disorder prediction 70 97 - -
Cec04g2056 354 MobiDBLite consensus disorder prediction 306 320 - -
Cec04g2056 354 MobiDBLite consensus disorder prediction 274 297 - -
Cec04g2056 354 MobiDBLite consensus disorder prediction 321 354 - -
Cec04g2056 354 PANTHER IQ-DOMAIN 5-RELATED 97 315 - -
Cec04g2056 354 ProSiteProfiles IQ motif profile. 103 131 - -
Cec04g2056 354 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2056 Cec-Chr4:38622094 Cec07g1090 Cec-Chr7:26079835 8.70E-56 dispersed
Cec04g2056 Cec-Chr4:38622094 Cec05g2305 Cec-Chr5:34332935 7.00E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2056 - - - 0.0