Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec04g2113 | ATGAAGAGTCCAGTGAGGTTTAAGTTGGGGAAACAGTCGTCCCTGGCGCCGGATGGGCATCTCGAAGATTTGGAGGAGCTAGTCAAGCAGGACCAAACTGAGGAGGGGATAGATTCGAGGGTGAGGTTGATGTACTTGGCCAATGAAGGTGATTTGGAAGGGATTAATGAACTGTTGGATTCGGGAGTCGATGTCAATTTCCATGATATCGACAACCGGACGGCTCTGCATATTGCTGCTTGCCAGGGATTCGCCGACGTTGTCGCTTTGTTGCTCGAACGTGGCGCTGAAGTTGACTCCAAAGATCGCTGGGGGAGCACGCCTCTTAGGGATGCTGTACATTACAAAAACCACGATGTGATCAAACTTCTGGAGAAGCATGGTGCAAAGCCTCCGGTGGCCCCCATGCTCGTCAAGAATGCCCGTGAAGTTCCAGATTATGAAATTGATCCTAAGGAACTTGATTTTACTAACAGTGTGAACATTACCAAGGGAATATTCCGCAAAGCATCTTGGCGTGGAACTGAGGTTGCTGTGAAAGAGCTTGGAGAAGATCTATTCACGGATGAGGATAAAGTGAGGGCTTTCAGAGATGAGCTTGCATTGCTTCAGAAAATACGACACCCCAATGTTGTCCAGTTTCTTGGTGCTGTTACTCAAAGTTGGCCGATGATGATCGTTACAGAATATTTACCAAAGGGAGATCTAGGAGCATTATTGAGTAGAAAAAGAGAAATAAAAACAATGACGGTTGTGAGACTTGCCCTTGATATTGCAAGGGGGATGAATTATTTGCATGAGAACAAGCCAACACCAATTATTCATCGTAATCTTGAGCCTTCAAATATTCTGAGGGATGATTCTGGCCACCTGAAAGTAGCAAATTTTGGAGTTAGCAAGTTATTGAAAGTTAAAGAAGATACACCTTCGACTCATTCAGAGACTTCACGAAGATATGAAGCTCCGGAGGTTTTCAAAAATGAAGAATATGACACAAAGGTGGATGTGTTTTCTTTTGCTTTGATTTTACAAGAGATGATTGAAGGCTGTCCTCCATTTCCTGACAAGGCAGATAGTGAAGTTCCTAAATTGTATGCAGCAGGAGAACGTCCCCCATTTAGAGCATCACTTAAACGTTATGCAAATGGACTAAAAGAGCTAATTGAAGAATGTTGGAATGAGAAGCCAAATAGTAGACCAACTTTTAGGCAGACAATAACCCAGCTGGAATTCATTTACAACAGATTCGGTCATAAGAGGCGCTGGAAGGTCAGGCCATTGAAATGCTTCCAGAATATTGAGGCAATGTTGAAGAGAGATCGTTCCCGTCGAAGCAGTTTCAATCTTTCGTCACATTCTTCTGCCAGCATAGCTACCAACTTTTGCCAATGTGATCCATCAAATTGGAAAAGTTTGACAAACAGGCTCAGCAGCCGAGCCACCACCACGCCCACTGACAAATGCGCCCTCTCACCAACTCCATCCAACTCACCCACGGATCACTCGCCCGCTCCCGGCCACCACCATGACGTCTGCCCATTGCCAGCTCCGATCTACCCTCCGAAGCCTCGGTTGAACAGGCCATTGAAATGCTTCCAGAATATTGAGGCAATGGTGAAGAGAGATAGTTCCATCGAAGATCTCTCATTCGAATATTGTCATGGTTCATTCATGTACCCTTCCTTCCTTTACTCAACTTCAAATACAATGTATCATTGGCTAATTTCCTTTGAAGCCTTTAGCAAGAAGGTGTGCAGTGGTTTTGTGGCTTGCAAGGCCACCATTATGAGAGGTATAGAGCTGAGCATGGTGGAAAGGAAAAGCTTTGCAGAAAAAAGTATGTCAGTAAAGCAGAGTTGCCTTCTGCCCAATACTGCTACTGAAGAGCTTTAG | 1893 | 44.85 | MKSPVRFKLGKQSSLAPDGHLEDLEELVKQDQTEEGIDSRVRLMYLANEGDLEGINELLDSGVDVNFHDIDNRTALHIAACQGFADVVALLLERGAEVDSKDRWGSTPLRDAVHYKNHDVIKLLEKHGAKPPVAPMLVKNAREVPDYEIDPKELDFTNSVNITKGIFRKASWRGTEVAVKELGEDLFTDEDKVRAFRDELALLQKIRHPNVVQFLGAVTQSWPMMIVTEYLPKGDLGALLSRKREIKTMTVVRLALDIARGMNYLHENKPTPIIHRNLEPSNILRDDSGHLKVANFGVSKLLKVKEDTPSTHSETSRRYEAPEVFKNEEYDTKVDVFSFALILQEMIEGCPPFPDKADSEVPKLYAAGERPPFRASLKRYANGLKELIEECWNEKPNSRPTFRQTITQLEFIYNRFGHKRRWKVRPLKCFQNIEAMLKRDRSRRSSFNLSSHSSASIATNFCQCDPSNWKSLTNRLSSRATTTPTDKCALSPTPSNSPTDHSPAPGHHHDVCPLPAPIYPPKPRLNRPLKCFQNIEAMVKRDSSIEDLSFEYCHGSFMYPSFLYSTSNTMYHWLISFEAFSKKVCSGFVACKATIMRGIELSMVERKSFAEKSMSVKQSCLLPNTATEEL | 630 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 39034756 | 39043893 | + | CePI673135_04g021130.1 | Cec04g2113 | 201595 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec04g2113 | 630 | SMART | ANK_2a | 38 | 67 | IPR002110 | GO:0005515(InterPro) | |
Cec04g2113 | 630 | SMART | ANK_2a | 71 | 100 | IPR002110 | GO:0005515(InterPro) | |
Cec04g2113 | 630 | SMART | ANK_2a | 104 | 133 | IPR002110 | GO:0005515(InterPro) | |
Cec04g2113 | 630 | ProSiteProfiles | Ankyrin repeat region circular profile. | 71 | 103 | - | - | |
Cec04g2113 | 630 | MobiDBLite | consensus disorder prediction | 482 | 507 | - | - | |
Cec04g2113 | 630 | SUPERFAMILY | Protein kinase-like (PK-like) | 166 | 412 | IPR011009 | - | |
Cec04g2113 | 630 | MobiDBLite | consensus disorder prediction | 482 | 502 | - | - | |
Cec04g2113 | 630 | Gene3D | Phosphorylase Kinase; domain 1 | 148 | 231 | - | - | |
Cec04g2113 | 630 | FunFam | Integrin-linked protein kinase family | 20 | 147 | - | - | |
Cec04g2113 | 630 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 60 | 410 | IPR051681 | GO:0004674(PANTHER) | |
Cec04g2113 | 630 | Pfam | Protein tyrosine and serine/threonine kinase | 161 | 409 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec04g2113 | 630 | CDD | STKc_MAP3K-like | 169 | 409 | - | - | |
Cec04g2113 | 630 | Pfam | Ankyrin repeats (3 copies) | 43 | 131 | IPR002110 | GO:0005515(InterPro) | |
Cec04g2113 | 630 | FunFam | Integrin-linked protein kinase family | 232 | 425 | - | - | |
Cec04g2113 | 630 | ProSiteProfiles | Ankyrin repeat profile. | 71 | 103 | IPR002110 | GO:0005515(InterPro) | |
Cec04g2113 | 630 | Gene3D | - | 14 | 143 | IPR036770 | - | |
Cec04g2113 | 630 | ProSiteProfiles | Protein kinase domain profile. | 121 | 412 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec04g2113 | 630 | FunFam | serine/threonine-protein kinase STY46-like | 149 | 232 | - | - | |
Cec04g2113 | 630 | Gene3D | Transferase(Phosphotransferase) domain 1 | 232 | 460 | - | - | |
Cec04g2113 | 630 | SUPERFAMILY | Ankyrin repeat | 19 | 132 | IPR036770 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g2113 | Cec-Chr4:39034756 | Cec09g1458 | Cec-Chr9:22219160 | 1.10E-80 | dispersed | |
Cec02g1918 | Cec-Chr2:37007107 | Cec04g2113 | Cec-Chr4:39034756 | 1.60E-129 | wgd | |
Cec03g0681 | Cec-Chr3:7320698 | Cec04g2113 | Cec-Chr4:39034756 | 1.00E-144 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71958 | PF07714 | PK_Tyr_Ser-Thr | 2.60E-52 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec04g2113 | - | - | - | 0.0 |