Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2138 ATGACCCCCACGGAGCTCAAAGACCGCTTGATCTTTGGTCCTTCGTCGTCCCCACAAGACGCTTCTCCTATATTCGATGCTTTAACGCTAACTCTTTCCTCTTCCAGACCCTCTGCTTCATCTTCTCTTCAGGACCCGTCTACGCCTTTGGACCCAAAATCACAATCGCAGTCTCAACAGGCGTGGCTCGTGGATTCCAATTACACATGGCCCAAAAGCAACCTCCACCGCTCCAAAACCGCGCCTGCCATGGCGGTCATCAACGATGTCAATCATTCGCAGGAGCCCAAGCCACAATTTGGTAAACAATCTATCATCCGCCAAGCTGTTGTTCTTCTAATTATATACTTATCATTGGGCGTGGTTATCTATTGGATTAATCGTGATAAGTTTACGGCTCACGAGACTCATCCTGTGGTCGATGCATTGTACTTTTGCATTGTAACGATGTGTACTATTGGGTATGGAGATATTACCCCCAATAGTGCGGCGACGAAGCTGTTCTCAGTGTTGTTTGTGTTGGTGGGATTTGGGTTTATTGATATATTGCTCTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTAAAGAATGTAAAGAGGGGGGTGCAGCGTCAATCTGGGAAATCTTATATAATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAAGTGGCATTGGCCCTTGGTGTTGTGATACTTTGTATAGGAGTTGGCATGGGTGTTATGCATTTTGTTGAGAATCTGGGGTGGTTGGATTCATTTTATCTTTCAGTTATGTCTGTCACGACAGTTGGATATGGTGATCAGGCATTCAAGTCAATGACTGGTCGTATTTTTGCTTCTATCTGGTTGCTTGTATCAACCCTTGCTGTAGCTCGGGCGTTTCTTTATTTAGCAGAGGCAAGAGTAGATAAGCGGCACAGGATGATGGCAAAATGGATACTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCTGATATTGACAACAATGGTTTTGTGAGTAGGTCAGAATATGTGATATACAAGCTGAAGGAGATGGGTAAGGTATCAGAGAAAGATGTAATGCAGATATCTAATAACTTTGATAGGCTAGACACTGGCAAATGTGGGAAGATTACACTGGCTGATCTCTTGGAAAGTCATCACTGA 1173 43.73 MTPTELKDRLIFGPSSSPQDASPIFDALTLTLSSSRPSASSSLQDPSTPLDPKSQSQSQQAWLVDSNYTWPKSNLHRSKTAPAMAVINDVNHSQEPKPQFGKQSIIRQAVVLLIIYLSLGVVIYWINRDKFTAHETHPVVDALYFCIVTMCTIGYGDITPNSAATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLKNVKRGVQRQSGKSYIIDVKKGRMRIRMKVALALGVVILCIGVGMGVMHFVENLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADIDNNGFVSRSEYVIYKLKEMGKVSEKDVMQISNNFDRLDTGKCGKITLADLLESHH 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 39226659 39231273 + CePI673135_04g021380.1 Cec04g2138 201620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2138 390 MobiDBLite consensus disorder prediction 35 56 - -
Cec04g2138 390 FunFam Two-pore potassium channel 3 213 327 - -
Cec04g2138 390 Gene3D - 102 204 - -
Cec04g2138 390 SUPERFAMILY Voltage-gated potassium channels 220 326 - -
Cec04g2138 390 Gene3D - 299 390 - -
Cec04g2138 390 Gene3D - 235 298 - -
Cec04g2138 390 ProSitePatterns EF-hand calcium-binding domain. 334 346 IPR018247 -
Cec04g2138 390 MobiDBLite consensus disorder prediction 1 22 - -
Cec04g2138 390 FunFam Two-pore potassium channel 5 94 204 - -
Cec04g2138 390 Pfam Ion channel 112 191 IPR013099 -
Cec04g2138 390 Pfam Ion channel 237 306 IPR013099 -
Cec04g2138 390 SUPERFAMILY EF-hand 328 387 IPR011992 -
Cec04g2138 390 PRINTS Two pore domain K+ channel signature 148 176 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cec04g2138 390 PRINTS Two pore domain K+ channel signature 268 277 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cec04g2138 390 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 110 337 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(PANTHER)|GO:0071805(InterPro)
Cec04g2138 390 SUPERFAMILY Voltage-gated potassium channels 105 191 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2138 Cec-Chr4:39226659 Cec09g2220 Cec-Chr9:39112448 1.60E-50 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2138 K05389 - csv:101220017 725.317