Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2253 ATGGAACGCGGTTTCAAAACGGGAAAGGAAAAGAAGCCTTTGATTGTATCGTCTACGCTATTCAACTCCGACGAGCCGGTGGCAGTTTCCGAAAAAGATCAACTACTGCCAACCAATACACCGACGAAAACTACTTCCCGAACAGACACCCGGCTTCGGTTTCCGATCGTGAACACTGCTCTATTTGTTCGTCTTCTTCACCCAGGAGGAGGTGATATAGGGACGCTTCGGAATTCTCAATCTATTTCATGTGAAATGAAACATTTGTATTCTTTTGTATTGCTCAGTTTCGTCATTGGCAGAATTTCATCTCATTTTGCAAGGAGTTGGTTTCAGAAGTTCCAAAATAGGGTAAAGAAGGAAACTGTAAGTGACAATGAGGTTCAAGATGTACCCTCAAGTGCGACGAAGCAGAAAGTTGAGGTTGCTAAGCAATATATCGAAAACCATTACAAATCTCAAATGAAGTCATTGCAAGATAGGAAGGAGAGACGTTGGGTGTTGGAGAGGAGGCTTGCTGATGCTGATGTTTCTGAGGAAGACCAAATAAACGTTCTTAAATATTTAGAACAGAAGGAGACAGAATACATGCGCCTTCGTAGACATAAAATGGGCGTTGATGACTTTGAACTTTTGACAATTATTGGAAGGGGTGCATTTGGGGAGGTTAGACTTTGTAGAGAAAAAGCCACAGGTCACGTGTATGCAATGAAGAAGCTTAAGAAATCTGAGATGCTTCGCAGGGGGCAGGTGGAACATGTTAAAGCTGAAAGAAATCTTTTAGCAGAGGTTGACAGTGCCTACATTGTGAAGTTATACTGCTCCTTTCAGGATGATGATTTTTTGTATCTTATAATGCAATATCTTCCTGGAGGTGATATGATGACCCTGTTAATGCGCAAGGATATTTTGACGGAGGATGAGGCCAGATTTTATGTTGGGGAAACAGTCCTTGCTATAGAGTCCATCCACAAGCATAATTACATTCACAGAGACATCAAGCCTGATAATTTACTGCTTGATCGTTATGGCCACATTAAACTCTCAGATTTTGGGTTGTGTAAACCCTTGGAGTCTAGTAGTTTCCCTAATCTCACTGAGGAAGAAAAAGTAGTGGGGAAGAATGTCAGATCTTCCACCGAAAATGATAGTCAAATTAGTGCATCGAAACGGACACAACAGGAACAATTGTTACATTGGCAAAAGAACAGACGAACATTGGCTTATTCAGCTGTTGGAACGCCGGACTATATTGCCCCAGAAGTTTTATTGAGGAAAGGATATGGAATGGAGTGCGACTGGTGGTCCCTTGGTGCAATTATGTACGAAATGCTTGTGGGATTCCCACCTTTCTATTCTGATGATCCAATGTCTACATGTAGAAAGATTATTAACTGGAGAACTCATTTGAGATTCCCAACGGAAGCAAAACTGTCCATCGAGGCCAAAGATCTTATTTGCAAACTTCTATGCAATGTTGAGCAAAGGATTGGAACCAAAGGAGCTAAAGAAATTAAGGCGCATCCATGGTTTAAAGGTACACAATGGGATAAATTATATCAAATGGAAGCTGTTATCATTCCAGAGATTCAGGATGAGTTAGACACTCGAAATTTTGAGAAGTATGAAGAGCTGGGTGTGCCAGGTCAAACTCCATCAAAGTCGGGCCCTTTGAGAAAGAAGCTTTCACCCAAGGATGTGAACTTTGTTGGTTATACGTACAAGAATTTCGAAATTGTCAACGAACACCACTTGTCAGGCATTACTGAGATGAGGAAAAAGCCTATCAAGAGCAAGAGACCATCTGTTACGACTCTATTTGGTACATTCACCGTTCTAAAATTTCTGACTAATGCAAGTTGCTGGTTTCCATTACATATTCTTACCTTCTGGCCTCTCTGTTTGGCTCTCTCTTTCCTTTCCTTAGCCACAGCAGATTCTTCGGAGCAGACTGTTCAAAGAAGTTATCCTAATCATTTGCCAACCCATCCCGAAGTCTCAGAAAGCCCCGATCCATCACCTCGTTCAACTGGATCACTGCAACAGCCGAAACGATTCTGCAATCTTTATTCACAATCACAGATTCTCACCTGGCTAGTTAGCCTTCTTGTGGTGGAAGAAGGTTTCCAAATGCTGTTAGATGGCCATGAGTCTAAAGCTTCTCACAGCCAGGATCCAGCACAACTTTAA 2190 41.87 MERGFKTGKEKKPLIVSSTLFNSDEPVAVSEKDQLLPTNTPTKTTSRTDTRLRFPIVNTALFVRLLHPGGGDIGTLRNSQSISCEMKHLYSFVLLSFVIGRISSHFARSWFQKFQNRVKKETVSDNEVQDVPSSATKQKVEVAKQYIENHYKSQMKSLQDRKERRWVLERRLADADVSEEDQINVLKYLEQKETEYMRLRRHKMGVDDFELLTIIGRGAFGEVRLCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSAYIVKLYCSFQDDDFLYLIMQYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHIKLSDFGLCKPLESSSFPNLTEEEKVVGKNVRSSTENDSQISASKRTQQEQLLHWQKNRRTLAYSAVGTPDYIAPEVLLRKGYGMECDWWSLGAIMYEMLVGFPPFYSDDPMSTCRKIINWRTHLRFPTEAKLSIEAKDLICKLLCNVEQRIGTKGAKEIKAHPWFKGTQWDKLYQMEAVIIPEIQDELDTRNFEKYEELGVPGQTPSKSGPLRKKLSPKDVNFVGYTYKNFEIVNEHHLSGITEMRKKPIKSKRPSVTTLFGTFTVLKFLTNASCWFPLHILTFWPLCLALSFLSLATADSSEQTVQRSYPNHLPTHPEVSESPDPSPRSTGSLQQPKRFCNLYSQSQILTWLVSLLVVEEGFQMLLDGHESKASHSQDPAQL 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 40163024 40171790 - CePI673135_04g022530.1 Cec04g2253 201735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2253 729 Pfam Protein kinase C terminal domain 530 574 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2253 729 ProSiteProfiles Protein kinase domain profile. 209 511 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2253 729 Gene3D Phosphorylase Kinase; domain 1 530 540 - -
Cec04g2253 729 Gene3D Phosphorylase Kinase; domain 1 207 292 - -
Cec04g2253 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g2253 729 FunFam Non-specific serine/threonine protein kinase 410 529 - -
Cec04g2253 729 PANTHER SERINE/THREONINE-PROTEIN KINASE 118 579 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cec04g2253 729 Pfam Protein kinase domain 408 511 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2253 729 Pfam Protein kinase domain 210 362 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2253 729 CDD STKc_NDR_like 207 575 - -
Cec04g2253 729 FunFam Non-specific serine/threonine protein kinase 293 360 - -
Cec04g2253 729 FunFam Non-specific serine/threonine protein kinase 180 292 - -
Cec04g2253 729 MobiDBLite consensus disorder prediction 652 680 - -
Cec04g2253 729 SUPERFAMILY Protein kinase-like (PK-like) 190 558 IPR011009 -
Cec04g2253 729 CDD MobB_NDR_LATS-like 143 204 - -
Cec04g2253 729 Gene3D Transferase(Phosphotransferase) domain 1 293 361 - -
Cec04g2253 729 Gene3D Transferase(Phosphotransferase) domain 1 406 529 - -
Cec04g2253 729 SMART serkin_6 209 511 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2253 729 SMART pkinase_C_6 512 576 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2253 729 ProSiteProfiles AGC-kinase C-terminal domain profile. 512 584 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2253 729 ProSitePatterns Protein kinases ATP-binding region signature. 215 238 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1826 Cec-Chr1:32714375 Cec04g2253 Cec-Chr4:40163024 2.40E-45 dispersed
Cec03g1597 Cec-Chr3:34064320 Cec04g2253 Cec-Chr4:40163024 1.30E-178 dispersed
Cec04g2253 Cec-Chr4:40163024 Cec06g0728 Cec-Chr6:8430571 1.20E-221 dispersed
Cec04g2253 Cec-Chr4:40163024 Cec05g1987 Cec-Chr5:31886686 4.30E-182 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71962 PF00069 Pkinase 4.70E-64 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2253 K08790 - csv:101208438 1043.88