Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2260 ATGGATATTATTTACTGTGCACGTCTACTATGTGTTGTTGTCTGTTTTGGGATGTTTCTATGCGCATCTTGTCTTGACGAATTCAGTGATTCAACAGCTGTTTACATTGTAACTCTCAAGGAACCTCCTTCCACTACTCATTACTATGGTCAGCTTAGACAAAATACCACTTCCTTTAGGCTTAATACTTCTGGTGGATTAAGCATCCACAAACCAAGAAACATATCGAGAAAGCATCGAAGATATAGATCTTACATAGCCCGAGTTCATGATTCATTGTTGAAGAAGGTCTTGAAGGGGGAAAAATATCTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAGTAAACTTTCAAAGAGGATAGAGGTGGCGAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCACACTCCACAGTTCTTGGGCCTACCGCAGGGAGCTTGGTCTCAAGATGGTGGCTTTGAGTCTGCTGGAGCTGGGATTGTGATAGGGTTCATTGACACTGGCATTGATCCTTCGCACCCCAGCTTTGCTGATGATTTGACTGATAATCCGTTTCCCATTCCGGCTCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGATCTTGCAATCGGAAGCTTGTGGGAGCACGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCATCGCCATTTGATGGTGATGGACATGGCACGCACACAGCTTCAATTGCTGCTGGAAACCATGGCATTCCAGTCATAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGTTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCAGGATGGAGTGGATATAATAAGTTTATCAATCACACCGAATCGGCGTCCCCCTGGTATTGCAACATTTTTTAATCCCATAGATATGGCACTGCTCTCTGCTGTAAAGGCTGGTATATTCGTTGTGCAAGCAGCTGGCAATACTGGACCAGCACCAAAGAGCATGTCTTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCTTCTCACGATAGAAGCTACGCTAACTCTATACACCTTGGCAATAATGTCACCATCCCGGGGGTCGGTCTTGCACCTGGAACCTATAATGACACAAAGTACAAACTAGTTGCTGCAATACATGCACTGAACAATGACACAAACGTGTCAGAGGACATGTATGTGGGCGAATGCCAAGACTCCAGTAACTTTGATCAGGATCTGGTCCAAGGGAACCTTCTAATATGCAGCTACTCAATCAGATTTGTGCTAGGGCTTTCGACGGTTAAACAGGCTTTACAGACGGCGAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTAGGCTCAACCCAATTCCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATACTACAATTCTTCTTTGGAAGTAGATGCATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCCAGCATATGTGGAGGATTGAAGGCAAATTATAGCTCTTCTGCCCCACAAATTATGTACTACTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCTAACTTGGTAGCTCCTGGAAATTCCATATGGGCTGCTTGGAGCTCTGTTGCCACTGACTCTATTGAATTTCTTGGTGAAAACTTTGCAATGATGTCGGGAACGAGCATGGCTGCTCCTCATATTGCAGGCCTAGCCTCACTCATAAAGCAGAAGTATCCTAGTCTTAGTCCTTCAGCCATTGCATCTGCACTATCGACAACAGCTTCTCTTTACAACAAGACTGGTGGACCGATCATGGCGCAGCGTGCTTATGCTAACCCTGAACAGAACCAGTCTCCAGCTACGCCTTTCGATATGGGAAGTGGTTTTGTGAATGCAACAGCAGCTCTCAACCCAGGGTTAATATTTGATTCTAGTTACGATGATTATATGTCTTTTCTTTGTGGTATCAACGGATCATCTCCTGTGGTCTTCAACTACACAGGCCAGAACTGTGGGCTATACAATTCTAGCATTACTGGAGCTGATTTGAACTTGCCCTCTGTGACGATAGCAAAACTTAACCAGTCGAGAGTAGTGCAACGAACCGTGACCAACATTGCTGGACCTGAGTTTTATAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCAACTCGATTTACAATCGGCAGTGGCGAGAAACAAGAGCTAACCATATTCTTCAACTCCACAATGAACAGCTCGGTTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAGTGCAGGCCATATAATCAACATTCCTCTTTCGAAAGTAGGATATGGGCTGGAAGAACAAGAGAATGCTTTTCATTATGAGAATTACAGGAGTATCATTACTAAAGAAGAGGCTTTCCCCTTTATGGTTCTCTACTCAAAGCTCGTTCAAGTGATTGTGAAGCCCTTTTCTTACACCTATTTATTTCACATGTCGGTTGACTCAAAAGAGTCCCATCCCACTGAAGAAAGAGTTAACTGTATTATCATAGTTCAGTTCGACGTCACTCTAATCTAA 2739 43.34 MDIIYCARLLCVVVCFGMFLCASCLDEFSDSTAVYIVTLKEPPSTTHYYGQLRQNTTSFRLNTSGGLSIHKPRNISRKHRRYRSYIARVHDSLLKKVLKGEKYLKLYSYHFLINGFAVLVTEEQASKLSKRIEVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGFESAGAGIVIGFIDTGIDPSHPSFADDLTDNPFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSIHLGNNVTIPGVGLAPGTYNDTKYKLVAAIHALNNDTNVSEDMYVGECQDSSNFDQDLVQGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDALTKKISKFGAVASICGGLKANYSSSAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNSIWAAWSSVATDSIEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLSPSAIASALSTTASLYNKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSITGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEFYSVGWSAPYGISLKVSPTRFTIGSGEKQELTIFFNSTMNSSVASFGRIGLFGSAGHIINIPLSKVGYGLEEQENAFHYENYRSIITKEEAFPFMVLYSKLVQVIVKPFSYTYLFHMSVDSKESHPTEERVNCIIIVQFDVTLI 912
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 40225083 40231860 + CePI673135_04g022600.1 Cec04g2260 201742

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2260 912 CDD Peptidases_S8_3 146 653 IPR034197 -
Cec04g2260 912 CDD PA_subtilisin_like 392 527 - -
Cec04g2260 912 Pfam Fibronectin type-III domain 740 831 IPR041469 -
Cec04g2260 912 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
Cec04g2260 912 Gene3D Peptidase S8/S53 domain 173 707 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cec04g2260 912 Gene3D - 711 834 - -
Cec04g2260 912 SUPERFAMILY Subtilisin-like 146 698 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cec04g2260 912 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 144 IPR037045 -
Cec04g2260 912 Gene3D - 386 554 - -
Cec04g2260 912 FunFam Subtilisin-like protease SBT1.5 173 397 - -
Cec04g2260 912 PRINTS Subtilisin serine protease family (S8) signature 616 632 IPR015500 -
Cec04g2260 912 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Cec04g2260 912 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Cec04g2260 912 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 176 187 IPR023827 -
Cec04g2260 912 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 94 799 IPR045051 -
Cec04g2260 912 Pfam Subtilase family 171 666 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cec04g2260 912 ProSiteProfiles Serine proteases, subtilase domain profile. 151 694 - -
Cec04g2260 912 Pfam Peptidase inhibitor I9 34 145 IPR010259 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2260 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2260 Cec-Chr4:40225083 Cec11g1222 Cec-Chr11:25615386 5.30E-190 dispersed
Cec04g2260 Cec-Chr4:40225083 Cec09g0105 Cec-Chr9:884509 4.60E-85 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi10g640 . Blo11g00158 . . . . Bma14g00912 . . Cmo18g00546 Cma03g01472 Cma07g00037 Car03g01332 Car07g00037 . . Cpe10g00033 Bhi03g00208 . . . Hepe04g2078 . . Cla01g02485 Cam01g2607 Cec04g2260 Cco04g2337 Clacu01g2628 Cmu01g2491 Cre04g2154 . . . . . Csa06g03883 . Cme08g00050 . . . . . . . . . Cmo03g01474 Cmo07g00039 . Cma18g00570 . Car18g00527 Cpe19g01191 . . . . . . . . . . . . . . . . . Chy02g00053 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec07g0702 . 5 786 Subtilisin-like Serine Gene Family AT1G01900 53.5 1.5e-230 796.2
Cec07g0700 . 39 788 Subtilisin-like Serine Gene Family AT1G01900 55.9 1.0e-229 793.5
Cec07g0173 . 12 769 Subtilisin-like Serine Gene Family AT1G04110 67.4 1.4e-313 1072.0
Cec05g1726 . 3 764 Subtilisin-like Serine Gene Family AT1G20150 53.2 1.7e-224 776.2
Cec05g1726 . 6 505 Subtilisin-like Serine Gene Family AT1G20160 60.9 3.1e-169 592.0
Cec04g2260 . 9 832 Subtilisin-like Serine Gene Family AT1G30600 65.2 8.0e-310 1059.7
Cec07g0890 . 56 775 Subtilisin-like Serine Gene Family AT1G32940 54.5 1.6e-226 782.7
Cec07g0890 . 56 775 Subtilisin-like Serine Gene Family AT1G32950 54.1 1.2e-221 766.5
Cec07g0890 . 4 775 Subtilisin-like Serine Gene Family AT1G32960 53.2 7.7e-230 793.9
Cec01g0987 . 14 764 Subtilisin-like Serine Gene Family AT1G62340 58.9 4.2e-250 861.3
Cec02g0320 . 28 768 Subtilisin-like Serine Gene Family AT2G04160 63.5 2.5e-281 964.9
Cec10g0404 . 60 789 Subtilisin-like Serine Gene Family AT2G04160 58.5 1.9e-257 885.6
Cec10g0400 . 26 764 Subtilisin-like Serine Gene Family AT2G04160 58.1 1.5e-249 859.4
Cec10g0402 . 26 765 Subtilisin-like Serine Gene Family AT2G04160 56.2 6.6e-242 833.9
Cec10g0403 . 23 770 Subtilisin-like Serine Gene Family AT2G04160 53.8 4.6e-235 811.2
Cec01g1204 . 5 769 Subtilisin-like Serine Gene Family AT2G04160 53.4 2.4e-231 798.9
Cec10g0409 . 3 698 Subtilisin-like Serine Gene Family AT2G04160 56.4 2.9e-229 792.0
Cec10g0401 . 26 766 Subtilisin-like Serine Gene Family AT2G04160 53.6 3.2e-228 788.5
Cec03g1564 . 26 765 Subtilisin-like Serine Gene Family AT2G05920 73.7 0.0e+00 1100.9
Cec04g1428 . 22 761 Subtilisin-like Serine Gene Family AT2G05920 55.5 3.0e-231 798.5
Cec08g1697 . 36 773 Subtilisin-like Serine Gene Family AT2G05920 55.6 9.7e-222 766.9
Cec09g0105 . 27 760 Subtilisin-like Serine Gene Family AT2G05920 53.6 1.8e-215 746.1
Cec05g0912 . 27 772 Subtilisin-like Serine Gene Family AT2G05920 51.8 1.2e-214 743.4
Cec02g1245 . 31 764 Subtilisin-like Serine Gene Family AT2G05920 51.6 8.0e-208 720.7
Cec09g0133 . 28 781 Subtilisin-like Serine Gene Family AT2G05920 51.4 1.7e-202 703.0
Cec11g1222 . 34 835 Subtilisin-like Serine Gene Family AT2G19170 81.7 0.0e+00 1337.0
Cec09g0105 . 8 767 Subtilisin-like Serine Gene Family AT3G14067 63.9 1.7e-282 968.8
Cec04g1428 . 9 761 Subtilisin-like Serine Gene Family AT3G14067 53.8 1.4e-223 773.1
Cec03g1564 . 25 763 Subtilisin-like Serine Gene Family AT3G14067 54.3 1.4e-220 763.1
Cec08g1697 . 32 773 Subtilisin-like Serine Gene Family AT3G14067 51.5 2.6e-209 725.7
Cec09g0133 . 9 787 Subtilisin-like Serine Gene Family AT3G14067 50.3 3.2e-204 708.8
Cec09g0133 . 31 789 Subtilisin-like Serine Gene Family AT3G14240 76.9 0.0e+00 1206.4
Cec02g1245 . 32 772 Subtilisin-like Serine Gene Family AT3G14240 58.6 4.9e-245 844.3
Cec04g1428 . 27 757 Subtilisin-like Serine Gene Family AT3G14240 52.5 2.8e-216 748.8
Cec09g0105 . 29 758 Subtilisin-like Serine Gene Family AT3G14240 51.7 1.9e-212 736.1
Cec05g0912 . 28 768 Subtilisin-like Serine Gene Family AT3G14240 50.1 3.9e-210 728.4
Cec03g1564 . 29 759 Subtilisin-like Serine Gene Family AT3G14240 51.0 1.1e-209 726.9
Cec08g1697 . 40 772 Subtilisin-like Serine Gene Family AT3G14240 50.5 8.8e-202 700.7
Cec07g0407 . 8 706 Subtilisin-like Serine Gene Family AT3G46840 50.1 2.2e-178 622.9
Cec07g0407 . 8 706 Subtilisin-like Serine Gene Family AT3G46850 50.1 2.0e-179 626.3
Cec07g0711 . 12 570 Subtilisin-like Serine Gene Family AT4G00230 60.8 4.2e-196 681.4
Cec07g0699 . 9 568 Subtilisin-like Serine Gene Family AT4G00230 58.2 2.8e-187 652.1
Cec04g1140 . 1 540 Subtilisin-like Serine Gene Family AT4G00230 51.1 3.4e-145 512.3
Cec05g2401 . 5 497 Subtilisin-like Serine Gene Family AT4G00230 50.2 1.5e-132 470.3
Cec07g0890 . 56 773 Subtilisin-like Serine Gene Family AT4G10510 53.1 4.6e-221 764.6
Cec07g0890 . 33 773 Subtilisin-like Serine Gene Family AT4G10520 54.9 2.4e-228 788.9
Cec07g0890 . 33 773 Subtilisin-like Serine Gene Family AT4G10530 52.6 6.1e-216 747.7
Cec07g0890 . 32 775 Subtilisin-like Serine Gene Family AT4G10540 54.5 6.7e-234 807.4
Cec07g0890 . 56 775 Subtilisin-like Serine Gene Family AT4G10550 53.4 6.0e-221 764.2
Cec04g2260 . 12 832 Subtilisin-like Serine Gene Family AT4G20430 68.1 0.0e+00 1128.6
Cec03g0500 . 1 273 Subtilisin-like Serine Gene Family AT4G21320 78.8 1.5e-127 452.6
Cec07g0890 . 28 772 Subtilisin-like Serine Gene Family AT4G21650 50.2 4.2e-204 708.4
Cec01g1328 . 62 791 Subtilisin-like Serine Gene Family AT4G26330 55.7 6.3e-234 807.4
Cec11g1222 . 29 835 Subtilisin-like Serine Gene Family AT4G30020 81.3 0.0e+00 1332.8
Cec02g1245 . 25 772 Subtilisin-like Serine Gene Family AT4G34980 75.1 0.0e+00 1150.2
Cec09g0133 . 16 789 Subtilisin-like Serine Gene Family AT4G34980 53.2 4.4e-230 794.7
Cec04g1428 . 1 757 Subtilisin-like Serine Gene Family AT4G34980 51.4 7.8e-211 730.7
Cec05g0912 . 9 771 Subtilisin-like Serine Gene Family AT4G34980 50.4 1.6e-208 723.0
Cec03g1564 . 25 759 Subtilisin-like Serine Gene Family AT4G34980 50.5 2.0e-206 716.1
Cec04g1140 . 14 527 Subtilisin-like Serine Gene Family AT5G03620 60.6 7.8e-179 624.0
Cec07g0699 . 5 566 Subtilisin-like Serine Gene Family AT5G03620 51.6 1.3e-146 516.9
Cec07g0711 . 8 568 Subtilisin-like Serine Gene Family AT5G03620 50.3 3.9e-146 515.4
Cec07g0407 . 10 538 Subtilisin-like Serine Gene Family AT5G03620 51.7 4.8e-144 508.4
Cec05g2401 . 1 496 Subtilisin-like Serine Gene Family AT5G03620 50.7 5.5e-132 468.4
Cec01g0100 . 2 470 Subtilisin-like Serine Gene Family AT5G03620 51.1 5.7e-129 458.4
Cec06g0929 . 291 1050 Subtilisin-like Serine Gene Family AT5G19660 79.5 0.0e+00 1266.1
Cec04g2260 . 34 612 Subtilisin-like Serine Gene Family AT5G44530 70.8 3.3e-244 841.3
Cec04g2116 . 77 781 Subtilisin-like Serine Gene Family AT5G45640 52.3 8.9e-199 690.6
Cec04g2116 . 23 781 Subtilisin-like Serine Gene Family AT5G45650 57.6 3.2e-247 851.7
Cec05g0912 . 27 770 Subtilisin-like Serine Gene Family AT5G51750 73.6 0.0e+00 1152.9
Cec04g1428 . 13 761 Subtilisin-like Serine Gene Family AT5G51750 52.0 1.3e-229 793.1
Cec08g1697 . 16 773 Subtilisin-like Serine Gene Family AT5G51750 52.5 3.0e-226 781.9
Cec03g1564 . 24 763 Subtilisin-like Serine Gene Family AT5G51750 51.3 2.1e-219 759.2
Cec05g2401 . 3 497 Subtilisin-like Serine Gene Family AT5G58840 50.3 2.8e-130 462.6
Cec05g2401 . 1 668 Subtilisin-like Serine Gene Family AT5G59190 50.7 5.3e-182 634.8
Cec01g1204 . 13 770 Subtilisin-like Serine Gene Family AT5G59810 59.8 4.0e-263 904.4
Cec10g0404 . 791 1533 Subtilisin-like Serine Gene Family AT5G59810 61.8 7.6e-262 900.2
Cec02g0320 . 11 768 Subtilisin-like Serine Gene Family AT5G59810 58.6 3.5e-259 891.3
Cec10g0400 . 1 764 Subtilisin-like Serine Gene Family AT5G59810 55.4 2.3e-234 808.9
Cec10g0402 . 1 765 Subtilisin-like Serine Gene Family AT5G59810 54.4 1.7e-232 802.7
Cec10g0401 . 1 766 Subtilisin-like Serine Gene Family AT5G59810 54.8 4.1e-231 798.1
Cec10g0403 . 1 772 Subtilisin-like Serine Gene Family AT5G59810 53.7 6.7e-226 780.8
Cec10g0409 . 3 698 Subtilisin-like Serine Gene Family AT5G59810 55.5 4.1e-223 771.5
Cec04g1428 . 8 762 Subtilisin-like Serine Gene Family AT5G67360 72.0 0.0e+00 1100.1
Cec08g1697 . 14 774 Subtilisin-like Serine Gene Family AT5G67360 64.9 2.9e-290 994.6
Cec03g1564 . 29 764 Subtilisin-like Serine Gene Family AT5G67360 56.5 3.6e-232 801.6
Cec09g0105 . 8 759 Subtilisin-like Serine Gene Family AT5G67360 56.1 9.7e-230 793.5
Cec05g0912 . 11 769 Subtilisin-like Serine Gene Family AT5G67360 53.2 2.2e-226 782.3
Cec09g0133 . 9 784 Subtilisin-like Serine Gene Family AT5G67360 51.6 1.0e-210 730.3
Cec02g1245 . 12 767 Subtilisin-like Serine Gene Family AT5G67360 51.4 5.0e-210 728.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008306 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 1 1 1 1 34