Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2260 ATGGATATTATTTACTGTGCACGTCTACTATGTGTTGTTGTCTGTTTTGGGATGTTTCTATGCGCATCTTGTCTTGACGAATTCAGTGATTCAACAGCTGTTTACATTGTAACTCTCAAGGAACCTCCTTCCACTACTCATTACTATGGTCAGCTTAGACAAAATACCACTTCCTTTAGGCTTAATACTTCTGGTGGATTAAGCATCCACAAACCAAGAAACATATCGAGAAAGCATCGAAGATATAGATCTTACATAGCCCGAGTTCATGATTCATTGTTGAAGAAGGTCTTGAAGGGGGAAAAATATCTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAGTAAACTTTCAAAGAGGATAGAGGTGGCGAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCACACTCCACAGTTCTTGGGCCTACCGCAGGGAGCTTGGTCTCAAGATGGTGGCTTTGAGTCTGCTGGAGCTGGGATTGTGATAGGGTTCATTGACACTGGCATTGATCCTTCGCACCCCAGCTTTGCTGATGATTTGACTGATAATCCGTTTCCCATTCCGGCTCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGATCTTGCAATCGGAAGCTTGTGGGAGCACGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCATCGCCATTTGATGGTGATGGACATGGCACGCACACAGCTTCAATTGCTGCTGGAAACCATGGCATTCCAGTCATAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGTTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCAGGATGGAGTGGATATAATAAGTTTATCAATCACACCGAATCGGCGTCCCCCTGGTATTGCAACATTTTTTAATCCCATAGATATGGCACTGCTCTCTGCTGTAAAGGCTGGTATATTCGTTGTGCAAGCAGCTGGCAATACTGGACCAGCACCAAAGAGCATGTCTTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCTTCTCACGATAGAAGCTACGCTAACTCTATACACCTTGGCAATAATGTCACCATCCCGGGGGTCGGTCTTGCACCTGGAACCTATAATGACACAAAGTACAAACTAGTTGCTGCAATACATGCACTGAACAATGACACAAACGTGTCAGAGGACATGTATGTGGGCGAATGCCAAGACTCCAGTAACTTTGATCAGGATCTGGTCCAAGGGAACCTTCTAATATGCAGCTACTCAATCAGATTTGTGCTAGGGCTTTCGACGGTTAAACAGGCTTTACAGACGGCGAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTAGGCTCAACCCAATTCCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATACTACAATTCTTCTTTGGAAGTAGATGCATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCCAGCATATGTGGAGGATTGAAGGCAAATTATAGCTCTTCTGCCCCACAAATTATGTACTACTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCTAACTTGGTAGCTCCTGGAAATTCCATATGGGCTGCTTGGAGCTCTGTTGCCACTGACTCTATTGAATTTCTTGGTGAAAACTTTGCAATGATGTCGGGAACGAGCATGGCTGCTCCTCATATTGCAGGCCTAGCCTCACTCATAAAGCAGAAGTATCCTAGTCTTAGTCCTTCAGCCATTGCATCTGCACTATCGACAACAGCTTCTCTTTACAACAAGACTGGTGGACCGATCATGGCGCAGCGTGCTTATGCTAACCCTGAACAGAACCAGTCTCCAGCTACGCCTTTCGATATGGGAAGTGGTTTTGTGAATGCAACAGCAGCTCTCAACCCAGGGTTAATATTTGATTCTAGTTACGATGATTATATGTCTTTTCTTTGTGGTATCAACGGATCATCTCCTGTGGTCTTCAACTACACAGGCCAGAACTGTGGGCTATACAATTCTAGCATTACTGGAGCTGATTTGAACTTGCCCTCTGTGACGATAGCAAAACTTAACCAGTCGAGAGTAGTGCAACGAACCGTGACCAACATTGCTGGACCTGAGTTTTATAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCAACTCGATTTACAATCGGCAGTGGCGAGAAACAAGAGCTAACCATATTCTTCAACTCCACAATGAACAGCTCGGTTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAGTGCAGGCCATATAATCAACATTCCTCTTTCGAAAGTAGGATATGGGCTGGAAGAACAAGAGAATGCTTTTCATTATGAGAATTACAGGAGTATCATTACTAAAGAAGAGGCTTTCCCCTTTATGGTTCTCTACTCAAAGCTCGTTCAAGTGATTGTGAAGCCCTTTTCTTACACCTATTTATTTCACATGTCGGTTGACTCAAAAGAGTCCCATCCCACTGAAGAAAGAGTTAACTGTATTATCATAGTTCAGTTCGACGTCACTCTAATCTAA 2739 43.34 MDIIYCARLLCVVVCFGMFLCASCLDEFSDSTAVYIVTLKEPPSTTHYYGQLRQNTTSFRLNTSGGLSIHKPRNISRKHRRYRSYIARVHDSLLKKVLKGEKYLKLYSYHFLINGFAVLVTEEQASKLSKRIEVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGFESAGAGIVIGFIDTGIDPSHPSFADDLTDNPFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSIHLGNNVTIPGVGLAPGTYNDTKYKLVAAIHALNNDTNVSEDMYVGECQDSSNFDQDLVQGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDALTKKISKFGAVASICGGLKANYSSSAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNSIWAAWSSVATDSIEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLSPSAIASALSTTASLYNKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSITGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEFYSVGWSAPYGISLKVSPTRFTIGSGEKQELTIFFNSTMNSSVASFGRIGLFGSAGHIINIPLSKVGYGLEEQENAFHYENYRSIITKEEAFPFMVLYSKLVQVIVKPFSYTYLFHMSVDSKESHPTEERVNCIIIVQFDVTLI 912
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 40225083 40231860 + CePI673135_04g022600.1 Cec04g2260 201742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2260 912 CDD Peptidases_S8_3 146 653 IPR034197 -
Cec04g2260 912 CDD PA_subtilisin_like 392 527 - -
Cec04g2260 912 Pfam Fibronectin type-III domain 740 831 IPR041469 -
Cec04g2260 912 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
Cec04g2260 912 Gene3D Peptidase S8/S53 domain 173 707 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cec04g2260 912 Gene3D - 711 834 - -
Cec04g2260 912 SUPERFAMILY Subtilisin-like 146 698 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cec04g2260 912 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 144 IPR037045 -
Cec04g2260 912 Gene3D - 386 554 - -
Cec04g2260 912 FunFam Subtilisin-like protease SBT1.5 173 397 - -
Cec04g2260 912 PRINTS Subtilisin serine protease family (S8) signature 616 632 IPR015500 -
Cec04g2260 912 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Cec04g2260 912 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Cec04g2260 912 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 176 187 IPR023827 -
Cec04g2260 912 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 94 799 IPR045051 -
Cec04g2260 912 Pfam Subtilase family 171 666 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cec04g2260 912 ProSiteProfiles Serine proteases, subtilase domain profile. 151 694 - -
Cec04g2260 912 Pfam Peptidase inhibitor I9 34 145 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2260 Cec-Chr4:40225083 Cec11g1222 Cec-Chr11:25615386 5.30E-190 dispersed
Cec04g2260 Cec-Chr4:40225083 Cec09g0105 Cec-Chr9:884509 4.60E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2260 - - - 0.0