Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g2314 ATGGTTGCAGCAGCTTCAGCTTGGCACATGAAGTTCTTCACACTTACACTTGTGCTGCTCCTCCTTCCTTGTGTATGTGTGCACTCCCACTCACTGTCCCTCAAGGCACAAGCTTCTGTTCTGCTTTCCATCAAACACAGTTTCGATGAAGCCACTCCAATTTCGACTCTCCTGGACTGGAATGCTTCAAATTACTCAGACCTCTGCAGTTGGACTGGAATTCAATGCGATGCCATTGGCATGAAGAGATCAGTAGTGTCGCTCGACATTTCCAATTCCAACATCTCCGGGACCTTCCCCCCTCTAATTCACAAGCTAACCAAGCTTCGCTTTCTCAACATTTCCAACAATCAGTTCAGGGGGCAACTCCAGTGGGAGTATTCTCAGTTGAAACTGCTGCAGGTATTTGATGCTTATAACAACAATTTCAATGGCTCCCTCCCCACAGGCGTCCTTCAACTTCTCAGTCTAAAGCACTTAAATCTTGGCGGGAATTACTTCACCGGTCGAATCCCTCCAAGCTATGGTGATATGGGGGAGCTCACTTATCTGTCCCTTGCCGGCAATGACTTGGGCGGTCCCATTCCCCCTGAGCTCGGTAATCTTACCAATCTCCACCGCCTTTATTTGGGATACTTCAACCAGTTTGAGGGTGGGATACCGTCTCAACTCGAACAACTAGTGAATTTGAATCATCTCGACCTTGCGAGTTGTGGTTTACAAGGTCCAATCCCACCCGGGTTGGGGAATCTCAACAAGTTGGACACTCTGTTCTTGCAGACAAATCAGCTGAGCGGTTCAATTCCAACCCAGTTGGGCAACTTGAGCGCCTTGATTTCCCTTGACCTCTCCAACAACCAGTTAACGGGAGAGATCCCCCTTGAATTTGCAAACCTCCGCCAGCTTTCGCTGCTCAATTTATTCATGAACAAGTTGCATGGGGAGATTCCTAATGTTGTAGCCCATCTTCCGGGGTTGGAGGTTTTGAAGCTGTGGCAAAACAACTTCACAGGAGGCATTCCGTCAAAGCTGGGTGAGAATGGGAGGCTGAGGGAGGTGGACTTGTCCAGCAACAAGCTCACTGGGATGGTCCCGGAGCGTTTGTGCTTAGGAGGAAGGCTGAAGATCTTGATTTTACTCAATAATTTTTTGTTTGGGGGTGTGCCAGGTGATCTAGGGCGATGCCAGACGCTTGTAAGAGTTCGGATGGGTCAGAATTATTTGACGGGAACAATCCCAGATGGGCTGCTTTACTTGCCACAACTCTCCCTCATGGAATTGCAGAACAACTACCTGAGCGGACCCCTTCCACAACCACAACACATCCGCCAACTCCCCTCCAAACTAGGCCGCCTAAACCTTTCCAACAATCGCTTTTCTGGATCCCTCCCCATCTCCATCAGCAACTTCACAAGCCTCCAGATTCTGCTTTTGAGTGGAAACCGTTTCTCTGGCCACATTCCTCCCCAAATTGGCAAACTGCGAAATCTTCTCAAGCTAGACATGAGCAGAAACAACTTTTCCGGTTCAATCCCTCCTGAGTTCAGCAATTGTGTCTCCCTCACTTACCTGGATTTGAGCCTCAATCACCTAACTTCTTCAATCCCAGTTCAAATCTCACAAATTCGCATCTTAAATTATCTTAACTTGTCTTGGAACCATCTCACCCACACCCTTCCCATCGAAATTGGCTCCATAAAAAGCTTGACCTCTGCCGACTTCTCCCACAACAACTTTTCCGGTCCCATACCCCAAACTGGCCAGTTTCTACTCTTCAATTCCACATCCTTTGTGGGCAACCCTCAATTGTGTGGATTCTCCTTGAATCCCTGCAAGTCTCAAACCCCAACCACCGCCAATTCGAACAAAGGTGTTGGGAAATATAAGCTGGTGTTCGCGTTGGGGCTATTGATGTGTTCAGTAATATTTGCAGCTCTGGCAATTGTTCAGACAAGGAAAGCGAAAAAGAAATCAAGTTCGTGGAAGCTAGCAGCATTCCAGAAGCTGGAATTTGGAAGTAAGGATATCACAGAGTGCATAAAAGAGAACAACATAATTGGAAAAGGAGGAGCTGGTATTGTGTACAAAGGAATCATGCCAAACGGGGAACAAGTAGCCATAAAAAAGCTGTTGGCCATAACCAAGGGCTCCTCCCACGACAACGGCCTGTCCGCCGAGATACGAACGCTGGGCAAAATCCGGCATAGGAACATCGTGAGATTGCTTGCATTTTGCTCCAATAAGCAGACGAATCTGCTGGTATACGAGTACATGCCCAATGGAAGTTTAGGAGAAGTTCTCCACGGGAAGAGGGGGGGTTCTCTAAAATGGGGAACCAGGCTGAAGATAGCCATAGAAGCCGCCAAAGGGCTTTGCTATTTGCACCATGACTGCTCCCCGCTCATAATTCATAGGGACGTTAAGTCCAACAACATTTTGCTCAACTCAGACTTCGAGGCTCATGTAGCGGACTTCGGTTTGGCCAAGTTCTTGCAAGACAATGGAACATCGGAGTGCATGTCTGCAATAGCCGGCTCTTATGGGTACATTGCTCCAGAATATGCATACACATTAAAAGTGGATGAAAAAACTGATGTTTACAGTTTTGGAGTGGTGCTGCTGGAGTTGATAACGGGGCGAAAGCCAGTTGGAAATTTTGGAGAAGATGGTTTGGACATTGTCCAGTGGGCTAGGATTCAAACCAACTCCACCAAAGAAGGCGTTGTTAAGAACACAGCGTGGAGCGGCCAACAATGA 2757 47.77 MVAAASAWHMKFFTLTLVLLLLPCVCVHSHSLSLKAQASVLLSIKHSFDEATPISTLLDWNASNYSDLCSWTGIQCDAIGMKRSVVSLDISNSNISGTFPPLIHKLTKLRFLNISNNQFRGQLQWEYSQLKLLQVFDAYNNNFNGSLPTGVLQLLSLKHLNLGGNYFTGRIPPSYGDMGELTYLSLAGNDLGGPIPPELGNLTNLHRLYLGYFNQFEGGIPSQLEQLVNLNHLDLASCGLQGPIPPGLGNLNKLDTLFLQTNQLSGSIPTQLGNLSALISLDLSNNQLTGEIPLEFANLRQLSLLNLFMNKLHGEIPNVVAHLPGLEVLKLWQNNFTGGIPSKLGENGRLREVDLSSNKLTGMVPERLCLGGRLKILILLNNFLFGGVPGDLGRCQTLVRVRMGQNYLTGTIPDGLLYLPQLSLMELQNNYLSGPLPQPQHIRQLPSKLGRLNLSNNRFSGSLPISISNFTSLQILLLSGNRFSGHIPPQIGKLRNLLKLDMSRNNFSGSIPPEFSNCVSLTYLDLSLNHLTSSIPVQISQIRILNYLNLSWNHLTHTLPIEIGSIKSLTSADFSHNNFSGPIPQTGQFLLFNSTSFVGNPQLCGFSLNPCKSQTPTTANSNKGVGKYKLVFALGLLMCSVIFAALAIVQTRKAKKKSSSWKLAAFQKLEFGSKDITECIKENNIIGKGGAGIVYKGIMPNGEQVAIKKLLAITKGSSHDNGLSAEIRTLGKIRHRNIVRLLAFCSNKQTNLLVYEYMPNGSLGEVLHGKRGGSLKWGTRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFLQDNGTSECMSAIAGSYGYIAPEYAYTLKVDEKTDVYSFGVVLLELITGRKPVGNFGEDGLDIVQWARIQTNSTKEGVVKNTAWSGQQ 918
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 40710818 40714502 - CePI673135_04g023140.1 Cec04g2314 201796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g2314 918 SUPERFAMILY L domain-like 69 365 - -
Cec04g2314 918 Gene3D Phosphorylase Kinase; domain 1 644 757 - -
Cec04g2314 918 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 327 615 - -
Cec04g2314 918 Gene3D Ribonuclease Inhibitor 489 613 IPR032675 -
Cec04g2314 918 SUPERFAMILY L domain-like 292 624 - -
Cec04g2314 918 ProSiteProfiles Protein kinase domain profile. 680 918 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2314 918 Gene3D Ribonuclease Inhibitor 34 198 IPR032675 -
Cec04g2314 918 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 345 901 IPR051564 GO:0016020(PANTHER)
Cec04g2314 918 Pfam Protein kinase domain 682 886 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2314 918 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 758 913 - -
Cec04g2314 918 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 215 320 - -
Cec04g2314 918 SUPERFAMILY Protein kinase-like (PK-like) 674 888 IPR011009 -
Cec04g2314 918 Gene3D Ribonuclease Inhibitor 443 488 IPR032675 -
Cec04g2314 918 Gene3D Ribonuclease Inhibitor 370 442 IPR032675 -
Cec04g2314 918 SMART serkin_6 680 915 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g2314 918 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 649 757 - -
Cec04g2314 918 Pfam Leucine rich repeat N-terminal domain 36 77 IPR013210 -
Cec04g2314 918 Pfam Leucine Rich Repeat 545 565 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 Pfam Leucine Rich Repeat 181 202 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 Pfam Leucine Rich Repeat 520 540 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 Pfam Leucine Rich Repeat 449 470 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 Pfam Leucine Rich Repeat 229 251 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 Pfam Leucine Rich Repeat 156 176 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 Pfam Leucine Rich Repeat 85 106 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 Pfam Leucine Rich Repeat 278 299 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 Pfam Leucine Rich Repeat 496 518 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 Pfam Leucine Rich Repeat 349 369 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 Pfam Leucine Rich Repeat 472 494 IPR001611 GO:0005515(InterPro)
Cec04g2314 918 SMART LRR_typ_2 518 542 IPR003591 -
Cec04g2314 918 SMART LRR_typ_2 275 298 IPR003591 -
Cec04g2314 918 SMART LRR_typ_2 470 493 IPR003591 -
Cec04g2314 918 SMART LRR_typ_2 178 202 IPR003591 -
Cec04g2314 918 SMART LRR_typ_2 130 154 IPR003591 -
Cec04g2314 918 SMART LRR_typ_2 323 347 IPR003591 -
Cec04g2314 918 SMART LRR_typ_2 227 251 IPR003591 -
Cec04g2314 918 SMART LRR_typ_2 494 517 IPR003591 -
Cec04g2314 918 Gene3D Transferase(Phosphotransferase) domain 1 758 914 - -
Cec04g2314 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g2314 918 FunFam Leucine-rich repeat receptor-like protein kinase 34 197 - -
Cec04g2314 918 Gene3D Ribonuclease Inhibitor 212 369 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2314 Cec-Chr4:40710818 Cec10g0788 Cec-Chr10:12939079 2.30E-132 dispersed
Cec11g1548 Cec-Chr11:29777168 Cec04g2314 Cec-Chr4:40710818 3.70E-61 dispersed
Cec04g2314 Cec-Chr4:40710818 Cec04g1496 Cec-Chr4:34477962 3.20E-134 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71963 PF00069 Pkinase 2.30E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g2314 - - - 0.0