Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g0021 | ATGGGCAAGAAGGGAGGATCCTCGTGGTTGACGGCCGTCAAAAGGGCTTTTAGATCTCCTTCCAAAGATGAAGACCACAAGAAAACAGAGAAGCGGAGATGGGTTTTCAGGCGATCCACCAATCCACACCACCCGCCCTCCAACCCATCCTCCCAGGCGGTGGTCACTGCCGAAGCTGCAAAGGCCACCGCCCAAGCGGCTGTAGAGGTTGCTCGCCTCACCACCAAGCCTTCCAATCACGCCAGAGACCACTACGCTGCAATTCTCATTCAGACTATTTTTAGAGGTTACCTGGCAAGGAGGGCTCTGCGTGCGCTCAAGGGGCTGGTGAAGTTGCAGGCTTTGGTGAGGGGTCACAACGTCAGGAAACAGGCTAAAATGACACTTCGATGCATGCAAGCTCTGGTTCGAGTGCAGGCCCGTGTGCTCGATGAGCGGATGCGGCTCTCTCATGAAGGCACTAGAAATTCCACACTCAGCGATCCCAGTACCGCCCTTGGATCGCGTTACCTTCAATACTTGTCTGACAGAAAAGAGTTTGCTATGAAGCGTGATAGAAATCTCTCCCAGCAGATATGGCGGAGAGGTCGAAGTCCGTCCATGGGCAGCGGAGATGATCTGGAAGAAAGACCCAAGTGGTTGGATCAATGGAATTCACGGAAGCCATGGGAAAGCAGGGGAAGAGCATCAACCGATCAAAGAGATCCGATCAAAACAGTGGAAATCGACACCTTCCAACCCTACACTCGCACATCCTCTAACTTCCGAAGAATGGCTCAAAGTCAACAAAGAACAAACCCGCATTCGGGCAGTTCGCCACTCCACCGGACGCAACAAAACGTACCCTCTTTCTACCACTCACCGGCCACACCCTCCCCGTCTAAAACCAGGCCTATACTGCAAGTCCGGTCTGCAAGCCCGCGTTTCGTGAGAGAGGACAAAAGCGAGAATACATCCCAAACACCCAGCTTAAGGTCAAACTACTACTACGGTGGAAATTTGGTCCAACAACAAGAAGGCAGGAGTGGAGCGAGTGGCAGTTACGGCGGTGAAGGCAATTGTTTGCCCAATTACATGGCAGCGACGGAGTCTGCCAAGGCCCGACTACGGTCGCAGAGCGCGCCGAGGCAAAGGGCGTCGACGCCGGAGAGGGAGAGGGAGAAGGGAGTTGGGTGTGCAAAGAAACGGCTGTCATTCCCAGTTGCTGATCCAATTGGGCATGGAGTTTTGAGGAGCCCAAGCTTCAAGAGCGTGAGCGGGACGTACTTGGGACTGGAGCAGCAGTCTAACTATTCTTCCTGCTGTACTGAGAGCCTGGGAGGTGAGATTTCCCCCTCTTCAACCACTGATCTAAGAAGGTGGCTAAGTCCTCCGGAGGATCCCATCAAATGCGAATCCGTATCCCCAAATAAGCACGCCAATTGCACCATCACAAATTCCTACGCCACGTTTCCGGACCGAACCATCTGCCGTGCGGCGGAGGTGGTATACCCAACCACAGAGGCGGAGGTTATGTTGGCGGTGGCAGCGGCGACCAGAGGTATGAGGAAAATGAAGGTGGGGACTCGGTTCTCTCACAGCATCCCCAAGCTGGCGTGTCCGGAGGGGGAAGATGGGGTGGTGATAAGCACCAAGTACCTGAACCGGACTGTGAAGGTGGACGTGGAGGGGATGAGCATAAGCGTGGAGGGGGGAGCCACTCTGAGGCAGATCATAGACGACGCTGCCGCGGCTGGTCTTGCTCTGCCCCATACGCCTTACTGGTGGGGCCTCACCATTGGCGGCCTCCTAAGCACCGGGGCTCATGGCAGCTCCTTATGGGGCAAAGGCAGCGCAGTCCACGATTACGTTTCGGCCATTCAAATCGTCACTCCCGGTGGGCCCCAAGATGGCTACGCCAAACTCCGCACCCTTCTTCATCCGCCTCACCAACACCATCTCAACGCTGCCAAAGTTTCTTTGGGAGTTCTTGGAATTATTACACAGGTAACTCTAAAATTGGAACCAATGTTCAAGCGATCTATCACTTATTTGAAAATGGATGATATGGATTTGGGGGAAGAAGTGGTGAGGTTTGGGAGAAGTTATGAATTTGGAGACATGACTTGGTATCCAAGCCAACGTAAAGTTGTGTATCGTAAGGATGCCCGCGTTTCCTCCAATACCTCCGGCAATGGCCTCTATGACTTTATCCCATTCCGCCCCACGCCTTCATTAGACTTGGCACTTGTTCGAGCCTCAGAGGAGCACCAAGAATCAAGGCGTGACGCAGCTGCCAAGTGTTCTAGTGCAAACCTAATTACGTCCACTCTTTCACTCTTGGCTTACGGATTAACCAACAATGGCATCTCGTTTCTTAAATACCCTGTGATCGGGTATAACAATCGACTTCAGTCCTCCGGGAGTTGCCTAGACAGCCACAAGGAGTTTAGAATAACCACATGCCCTTGGGACCCCTTGATCAAAGGAGAGTTCTTCCACCAAACCGCCATTAGCATTGACTTGAAAGTGGTGAAAAGTTTCATCCAAGACATCCAGAAACTTGCCGAGTTGGAGCCCATGGCATTCTGTGGTCTCGAGCTCTACAATGGCATCCTCATGCGCTACGTCACAGCCTCCACCGCTTACTTGGGGAAGCAGGAAGATGGGGTTGACTTTGACTTCACATATTACAGAAGCAGAGACCCAATGAGTCCTAGGCTTTTCGAGGATGTTGTAGAAGAGGTAGAGCAAATGGCAGTGTTCAAATATGGAGGCCTTCCGCATTGGGGAAAGAATCGGAACGTAGCATTTAATCAAGCATTTCGCAAATACAGAAATAGAGAAAGCTTTCTGAAGGTTATGAGGGAATATGATCCCCATGGGCTTTTCTCAAATGAGTGGACAGATCAAATTCTTGGACTGAAAGGAAGAGTGAACATATACAAAGATGGGTGCGCCTTGGAAGGACTTTGCATATGCTCTCAACACAGTCATTGTGCCCCAAGCAAGGGCTACTTTTGTAGGGGTGGCACAATTTACAAGGAAGCTAGGGTGGGGGAGATGAGGAGTGAGGAGAGGGTTAATAAAGAATATGGAGCAGCTTCTAAAATGGCAATGAAAGCGGCTGCTGTATTGGTTGTTTTGGTAGCGGTGCGGGCGGTTTATGGAGCAGATATCATCGTTGGCGGCAACTCTGGGTGGAACCAGGGGGTGAACTACGACACCTGGGCTGCAGGACAGACTTTTAGGGTTGGCGACACATTAGTGGACGAGGTGAATGAAGAAAGCTACAAGGCATGCTCCTCCACCTCGGTGATCAAGTCCCACACAGGCGGAACAACACCCATTCCACTGTCAACGGCAGGGCCTAGGTACTTCATCTGTCCCACTCCCGGCCACTGTGCCTCCGGCATGAAGCTTCAAGTCAATGTTCTGGCGGCCAACTCCACCCCAAACCCAACCCCAACCCCAACCCCACCGGCCACAGCCAATCCACCGCCTCCATCTCCAAGCGCAGCAGCCCCCTCTGCTTTGTTCACTCTCAACCATTTCATCTTCGGGGCTTCCGTTGCCACCCTGTTTGCCAGAGGCTACGGTAGAGGAACAAGGTCGAAGGCGGTTACCATGTCGGCGGAGGATTTGGAGAACGGAGAGTTTTACTTGAGATATTATGTGGGGCACAAAGGGAAATTTGGACACGAATTCTTGGAGTTTGAATTCCGACCCGATGGCAAGCTTCGCTATGCTAACAACTCCAACTACAAGAACGACACCATGATTCGCAAGGAAGTCTACCTCACCCCTGCTGTCCTTCGGGAATGCCGTCGAATCATCTCCGATAGCGAGTTTTACACTGTCCCAACTCGTGATCGTGCTCAAGCTGGGATAAAGGCTACCTTCACAATTTCAAGTAACCCTCATAATGGTTCGAGGGACAGAGGGTATTTCCTTCATTATTTCCAAAAACTGGGGCAAATAACATCAATCCTCCCAAATCAGATTATGAAGGAAGACGACAATAATTGGCCAGAACCTGATCGGGTTGGACGACAGGAGCTTGAGATTGTGATGGGGAATGAGCATATCTCCTTCACTACGTCTAAGATTGGATCTCTTGTTGATGTGCAGAGCAGCAAGGATCCTGAAGGATTGCGGATATTCTATTATCTTGTTCAGGATCTGAAATGCTTTGTATTTTCTCTCATTTCACTCCACTTCAAGATCAAGCCAATTTAA | 4218 | 51.38 | MGKKGGSSWLTAVKRAFRSPSKDEDHKKTEKRRWVFRRSTNPHHPPSNPSSQAVVTAEAAKATAQAAVEVARLTTKPSNHARDHYAAILIQTIFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDERMRLSHEGTRNSTLSDPSTALGSRYLQYLSDRKEFAMKRDRNLSQQIWRRGRSPSMGSGDDLEERPKWLDQWNSRKPWESRGRASTDQRDPIKTVEIDTFQPYTRTSSNFRRMAQSQQRTNPHSGSSPLHRTQQNVPSFYHSPATPSPSKTRPILQVRSASPRFVREDKSENTSQTPSLRSNYYYGGNLVQQQEGRSGASGSYGGEGNCLPNYMAATESAKARLRSQSAPRQRASTPEREREKGVGCAKKRLSFPVADPIGHGVLRSPSFKSVSGTYLGLEQQSNYSSCCTESLGGEISPSSTTDLRRWLSPPEDPIKCESVSPNKHANCTITNSYATFPDRTICRAAEVVYPTTEAEVMLAVAAATRGMRKMKVGTRFSHSIPKLACPEGEDGVVISTKYLNRTVKVDVEGMSISVEGGATLRQIIDDAAAAGLALPHTPYWWGLTIGGLLSTGAHGSSLWGKGSAVHDYVSAIQIVTPGGPQDGYAKLRTLLHPPHQHHLNAAKVSLGVLGIITQVTLKLEPMFKRSITYLKMDDMDLGEEVVRFGRSYEFGDMTWYPSQRKVVYRKDARVSSNTSGNGLYDFIPFRPTPSLDLALVRASEEHQESRRDAAAKCSSANLITSTLSLLAYGLTNNGISFLKYPVIGYNNRLQSSGSCLDSHKEFRITTCPWDPLIKGEFFHQTAISIDLKVVKSFIQDIQKLAELEPMAFCGLELYNGILMRYVTASTAYLGKQEDGVDFDFTYYRSRDPMSPRLFEDVVEEVEQMAVFKYGGLPHWGKNRNVAFNQAFRKYRNRESFLKVMREYDPHGLFSNEWTDQILGLKGRVNIYKDGCALEGLCICSQHSHCAPSKGYFCRGGTIYKEARVGEMRSEERVNKEYGAASKMAMKAAAVLVVLVAVRAVYGADIIVGGNSGWNQGVNYDTWAAGQTFRVGDTLVDEVNEESYKACSSTSVIKSHTGGTTPIPLSTAGPRYFICPTPGHCASGMKLQVNVLAANSTPNPTPTPTPPATANPPPPSPSAAAPSALFTLNHFIFGASVATLFARGYGRGTRSKAVTMSAEDLENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYLTPAVLRECRRIISDSEFYTVPTRDRAQAGIKATFTISSNPHNGSRDRGYFLHYFQKLGQITSILPNQIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI | 1405 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 246665 | 263245 | - | CePI673135_05g000210.1 | Cec05g0021 | 201824 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g0021 | 1405 | Pfam | IQ calmodulin-binding motif | 86 | 104 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0021 | 1405 | Pfam | IQ calmodulin-binding motif | 110 | 126 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0021 | 1405 | SUPERFAMILY | FAD-binding/transporter-associated domain-like | 479 | 669 | IPR036318 | GO:0050660(InterPro) | |
| Cec05g0021 | 1405 | NCBIfam | FAD-dependent oxidoreductase | 457 | 1012 | IPR010030 | - | |
| Cec05g0021 | 1405 | ProSiteProfiles | IQ motif profile. | 83 | 111 | - | - | |
| Cec05g0021 | 1405 | Pfam | Plastocyanin-like domain | 1061 | 1132 | IPR003245 | GO:0009055(InterPro) | |
| Cec05g0021 | 1405 | ProSitePatterns | Type-1 copper (blue) proteins signature. | 1116 | 1132 | IPR028871 | - | |
| Cec05g0021 | 1405 | Pfam | D-arabinono-1,4-lactone oxidase | 826 | 964 | IPR007173 | GO:0003885(InterPro)|GO:0016020(InterPro) | |
| Cec05g0021 | 1405 | SUPERFAMILY | Mago nashi protein | 1211 | 1278 | IPR036605 | GO:0005634(InterPro) | |
| Cec05g0021 | 1405 | Pfam | Protein of unknown function (DUF4005) | 306 | 412 | IPR025064 | - | |
| Cec05g0021 | 1405 | FunFam | IQ-domain 11 | 82 | 133 | - | - | |
| Cec05g0021 | 1405 | ProSiteProfiles | PCMH-type FAD-binding domain profile. | 488 | 670 | IPR016166 | GO:0071949(InterPro) | |
| Cec05g0021 | 1405 | CDD | Phytocyanin | 1051 | 1138 | - | - | |
| Cec05g0021 | 1405 | Gene3D | Mago nashi | 1208 | 1405 | IPR036605 | GO:0005634(InterPro) | |
| Cec05g0021 | 1405 | MobiDBLite | consensus disorder prediction | 17 | 31 | - | - | |
| Cec05g0021 | 1405 | Pfam | L-gulonolactone oxidase 2-like, C-terminal domain | 976 | 1012 | - | - | |
| Cec05g0021 | 1405 | MobiDBLite | consensus disorder prediction | 1141 | 1166 | - | - | |
| Cec05g0021 | 1405 | Pfam | FAD binding domain | 494 | 627 | IPR006094 | GO:0050660(InterPro) | |
| Cec05g0021 | 1405 | Pfam | Mago nashi protein | 1213 | 1278 | IPR004023 | GO:0008380(InterPro)|GO:0035145(InterPro) | |
| Cec05g0021 | 1405 | Pfam | Mago nashi protein | 1324 | 1405 | IPR004023 | GO:0008380(InterPro)|GO:0035145(InterPro) | |
| Cec05g0021 | 1405 | Gene3D | - | 548 | 669 | IPR016169 | - | |
| Cec05g0021 | 1405 | MobiDBLite | consensus disorder prediction | 191 | 328 | - | - | |
| Cec05g0021 | 1405 | SUPERFAMILY | Mago nashi protein | 1323 | 1405 | IPR036605 | GO:0005634(InterPro) | |
| Cec05g0021 | 1405 | ProSiteProfiles | IQ motif profile. | 107 | 134 | - | - | |
| Cec05g0021 | 1405 | ProSiteProfiles | Phytocyanin domain profile. | 1051 | 1140 | IPR003245 | GO:0009055(InterPro) | |
| Cec05g0021 | 1405 | SUPERFAMILY | Cupredoxins | 1050 | 1139 | IPR008972 | - | |
| Cec05g0021 | 1405 | MobiDBLite | consensus disorder prediction | 1146 | 1166 | - | - | |
| Cec05g0021 | 1405 | FunFam | L-gulonolactone oxidase 5 | 549 | 669 | - | - | |
| Cec05g0021 | 1405 | Gene3D | - | 82 | 136 | - | - | |
| Cec05g0021 | 1405 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
| Cec05g0021 | 1405 | MobiDBLite | consensus disorder prediction | 364 | 391 | - | - | |
| Cec05g0021 | 1405 | MobiDBLite | consensus disorder prediction | 244 | 301 | - | - | |
| Cec05g0021 | 1405 | MobiDBLite | consensus disorder prediction | 201 | 239 | - | - | |
| Cec05g0021 | 1405 | PANTHER | GULONOLACTONE OXIDASE | 468 | 1011 | IPR050432 | GO:0016491(PANTHER) | |
| Cec05g0021 | 1405 | SMART | iq_5 | 105 | 126 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0021 | 1405 | SMART | iq_5 | 82 | 104 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0021 | 1405 | Gene3D | - | 1050 | 1144 | IPR008972 | - | |
| Cec05g0021 | 1405 | CDD | Mago_nashi | 1212 | 1405 | IPR004023 | GO:0008380(InterPro)|GO:0035145(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g1727 | Cec-Chr2:35039068 | Cec05g0021 | Cec-Chr5:246665 | 5.80E-12 | dispersed | |
| Cec05g0021 | Cec-Chr5:246665 | Cec06g0277 | Cec-Chr6:3116200 | 1.90E-117 | dispersed | |
| Cec05g0021 | Cec-Chr5:246665 | Cec04g1024 | Cec-Chr4:29828467 | 3.20E-24 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g0021 | K00103 | - | csv:101221035 | 988.023 |