Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0103 ATGTGGTTTCAATTCAACAACCCAACAAAAGCTAAGCAGCACATAAGAAAGGCACTATCAGCGCAACAGTTTATCCCCACAATTTGTGTACTGATGTCCAAATTTAAGGGTTTCTGGAAACAGAAATCTGAAAGGCTTCAATATCTGTATCCACCTGGTTTCTTTGTCATTTATGGAGCTACTGCCCAAAAAAGGAAATGGCAACGAAAGAAATGGCCAATATTGGAGAGAATGGAGAGAAGGTTTTCTATTGTCTGGAAGAAAACTCTTGATCCACAGGCGCCATTCCTTCGGCAATGCAACAAAATATTTGTGGTGTCCTGTGTCATAGCAGTAGCTGCGGACCCTCTCTTCTTTTACATCCCGGTGTTTGATAGACAACATCAATGCCTAACCACGGACCGACCCCTTATGATCATTGCTTGCCTTGTCCGTTCCTTCGTTGACATATTTTATCTACTTCACATCATCTTTGAATTTCGAACAGGTTTTCTGCCTTCTTATGTACAAGCACCAGGAAGTGCTGAATTAATTCGAGATGTAGCAGATATAACAAAGAGATACCTCTCTTCAAATTTCACCATTGATACCTTATCCATTCTCCCACTGCCTCAGCTTTTGGTACTAGTTATCATACCTGCATTGAAAGGCTTGATTCCATTGAAGACAAAGAAGTTTGTAAAGATTGCAGTTCTTATGCAATTCATGCCAAGGCTTCTCCGAATTTATCCACTATACAAAGAAGTAGTTAGAACTTCTGGCATACTAACAGAAAGAGCATGGAGTGGAGCTGCCTTCAATCTCCTTATTTATATGCAAGCTAGTCATGTAGTTGGTGCCTTTTGGTATTTATTTTCCGTAGAACAACAAGCAAGATGCTGGCTCGAGGCATGTAAGATAAATAACTGTACCAGCAATTTTCTGTATTGTGGAGATCCCAACGGACAGGCTTACCCGTTTATAGATGCATATTGCTCTCATAAAGAGTCTGAAGGTGACAATGCCTTCGACTTTGGGACATATGTTGAAGCCTTTAAGTTCCATTTAACCGTCGGCGCAAATCCATTCATTCTTTCTGGTGGGCTCTGCGAAGTGTCAGGTTTCTCTAGTGGACAAAACCTCGAAGTAAGCGATTACATAGGGGAGGTTCTTTTTGCTATCTTTATCGCCATCCTCGGTTTGGCTTTATTTGCATTACTCGTTAGCAACATTCAGCGTATGCTCCAGAAGCAGTTGAGGCGGCGTATTGGACGATATGATCAGTACAAATGGCAGCTAAATAGGGGAGTTACGGAAGAGGAACTGATCAATGAGCTTCCAGTAGACCTTAGAAGAGACATCAAACGCCTTCTTCACTTTGATGCATGCTTGGTTAAACTTAACATTGATAACCGACTATTAGATGTAATGCATGGATATCTCAAGCCAGTGTTATTCACAGAGGATAGCATCATTTTGCAAGAGGGCGAACCAGTTGTTATGATGGTATTTATCATGAAAGGAAAGCTGGTTGCTACTAGTTGTGGGGATATCACACCTTACAAGGTCGTTCTTAAGGCTGGCGACTTTTACGGTGAAGAGATAATTCCATGGGCAATGGAAGACCACCTCATTCCTCTTCCAATTTCAACCAGAAAATTAAATGTCAAACTAAGGTTATACTCTCGAGAATGGAGAGTCTGGGCAGCCAATAAAATACAAGAAGCTTGGCGTGAATACTGTCAAAGAAAGCAGAAGACAGGTGGTAGATTTCGAGATACATTGGCTAAAACCGTTGGCACCTCGGCAAACTCTGGTGTCAATTTATATGCGTCCGTATTCATATCCCATCTACTGCAAGCCGTGCAGCAAGATCGATGCCATGGAACAACCCAACACTCACAGGTGATCGATAGAATTTTGAGTCATTCCTCTCTCCCAAGACCTCCCTTTTCACCCCTTCTAGTTCCCATTCAACAACCTATCCAAATTCATATAGTGCTATCAGAGGCTCAGTTTAGCCCCACATTTTGGATAGTGATGCCCAAGTTAATGGGTTCTCAGATACCAAAATCTGTAAGGTTTGGACATCCAACTGCTGGAGGTTACCAATACAGAAGCAGACTGTCTCCAGGGTCAATATTGGAAAGCATAGAGAGAAAATTTTCAAGTATTTCTAATAGCTTTAGAAGAATAATAACACACTTGGGCTTCAAGCATCCAGGTGATCAGTCAGTAAATAAACCAAAATTTTGGAAGAAAATTCTTGATCCACATAAGCCATTTCTTCAGCAATGGAACAAGATATTTGTGCTCTCATCTGTCATAGCAGTAGCTGTGGATCCTCTCTTCTTTTACGTCCCAGTGATCGATGCACAACGTCAATGCCTAACCATGGACCGACAACTTATGATCATTGCTTGTGTTCTTCGTTCATTCATCGATTTATTTTATCTACTTCACATGGTCTTTGAATTTCGAACCGGTTTTCTTCCCCCTTCTTTACCGGTTTTTGGAAGTGGTGAATTAATCAAAGATCCAGCAAAAATAGCAAAGAAATATCTCTTCTCAAACTTCTTGATCGATATCTTATCCATTCTCCCACTACCTCAGCTTTTGGTATTAGCAATCGTACCTGCAGCGAAAGGCTCGACTGCCTTGAAGACAAAGAACGTCGTGAAGACTGCAGTTCTTTTGCAATATGTTCCAAGACTTCTCCGAATTTATCCACTATACAGAGAAGTAACCAGAACTTCTGGCATACTGACAGAAACAGCCTGGAGTGGAGCTGCCTTCAATCTCCTCATTTATATGCAAGCTAGTCATGTAGTTGGTGCCATTTGGTATTTGTTATCAATAGAACGACAAGCCAAATGCTGGCTCCAAGCATGCAGCAAAGATGAATGTATTGACAATTTTCTGTACTGTGGAGATCGTAAAAAACAAATCTCCCAGTCTATAAATGAGTTTTGCTCTCCTAAAGAGTCTGAAGATGGAAAGAGCTTCGAGTTTGGGATGTATGTTGAAGCCCTCAAGTTTAACTTAACCGAGACGACGAGTTTTCGCCGCAAATTCTGCTATTCCTTCTGGTGGGCTCTGCGAAATGTCGGCTCTAGCGGACAAAACCTTGATGTAGGCAATTACATGGGGGAGGTTTTTTTTGCTGTCTTCATTGCCATCCTTGGTTTGGTTTTATTCGCGTTACTCATTAGCAATATTCAGAAATATCTGCAGTCAACAACTGTTAAAATAGAGCAGATGAGAATTAACCGAAGAGACGCTGAGCATTGGATGGCACATCGTATGCTCCCAGAAGGGTTGAGGCAGCGTATTCGACGATATGATCAGTACAAATGGCAGCTAAACAGGGGAGTTAAGGAAGAGGAACTCATCAGTAACCTTCCTAAAGACCTCAGAAGAGACATCAAACGCCACCTTTGCTTGGCCCATCTTAAGAAAGTGCCACTTTTTAACAGCATGGATAAACAACTGTTAGACGCAATGTGCGAATATCTCAAGCCTGTGTTATTCACAGAGAAGAGCTTCATTCTGCAAGAGGGCGACCCAATTGATATGATGCTATTTATTATGAAAGGAAAGCTGGCTACCATTATTACTTGTGATTGGAAAAACGACCCGTACTTGGCCACGCTTAATGCTGGTGACTTCTGTGGCGAAGAGCTAGTTCAATGGGCAATGGATCCCACCTCCACCACTTCTCTTCCTATTTCACAAAGAACAGTTAAAACTCTAACTGAGGTTGAAGCCTTTTCTCTAAAGGCTAATGAGCTGAAATCTGTAACTAGTCAGTTCCACTTTCAGCGCCTTAATAGCAAGCAATTCCAACTCTCAGTGAGGTTCTACTCTCATCAATGGAAAGTTTGGGCAGCCTACAAAATACAAGAAGCTTGGCATGATTACCGCGAAAGAAGGCGGAGAGGGGGTGGAGATGGCAGGTTTCAAGATGCATTAGCTAAAACAATTGGCGCCTCGGCGAGCTTTAGTGCCACTCTGTATGCATCCATATTCATATCCCATCTACTGCAAGCTGTGCAGCGAGAACAACACCAGCAAACTGCCCAAGTCACACGAGTGATGACACTACCGCCGCCTCCGAAGCCAGACGATGAGCAAGACAAGCCAAATTTCACCATCTTGGATCTTTAA 4146 42.23 MWFQFNNPTKAKQHIRKALSAQQFIPTICVLMSKFKGFWKQKSERLQYLYPPGFFVIYGATAQKRKWQRKKWPILERMERRFSIVWKKTLDPQAPFLRQCNKIFVVSCVIAVAADPLFFYIPVFDRQHQCLTTDRPLMIIACLVRSFVDIFYLLHIIFEFRTGFLPSYVQAPGSAELIRDVADITKRYLSSNFTIDTLSILPLPQLLVLVIIPALKGLIPLKTKKFVKIAVLMQFMPRLLRIYPLYKEVVRTSGILTERAWSGAAFNLLIYMQASHVVGAFWYLFSVEQQARCWLEACKINNCTSNFLYCGDPNGQAYPFIDAYCSHKESEGDNAFDFGTYVEAFKFHLTVGANPFILSGGLCEVSGFSSGQNLEVSDYIGEVLFAIFIAILGLALFALLVSNIQRMLQKQLRRRIGRYDQYKWQLNRGVTEEELINELPVDLRRDIKRLLHFDACLVKLNIDNRLLDVMHGYLKPVLFTEDSIILQEGEPVVMMVFIMKGKLVATSCGDITPYKVVLKAGDFYGEEIIPWAMEDHLIPLPISTRKLNVKLRLYSREWRVWAANKIQEAWREYCQRKQKTGGRFRDTLAKTVGTSANSGVNLYASVFISHLLQAVQQDRCHGTTQHSQVIDRILSHSSLPRPPFSPLLVPIQQPIQIHIVLSEAQFSPTFWIVMPKLMGSQIPKSVRFGHPTAGGYQYRSRLSPGSILESIERKFSSISNSFRRIITHLGFKHPGDQSVNKPKFWKKILDPHKPFLQQWNKIFVLSSVIAVAVDPLFFYVPVIDAQRQCLTMDRQLMIIACVLRSFIDLFYLLHMVFEFRTGFLPPSLPVFGSGELIKDPAKIAKKYLFSNFLIDILSILPLPQLLVLAIVPAAKGSTALKTKNVVKTAVLLQYVPRLLRIYPLYREVTRTSGILTETAWSGAAFNLLIYMQASHVVGAIWYLLSIERQAKCWLQACSKDECIDNFLYCGDRKKQISQSINEFCSPKESEDGKSFEFGMYVEALKFNLTETTSFRRKFCYSFWWALRNVGSSGQNLDVGNYMGEVFFAVFIAILGLVLFALLISNIQKYLQSTTVKIEQMRINRRDAEHWMAHRMLPEGLRQRIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKRHLCLAHLKKVPLFNSMDKQLLDAMCEYLKPVLFTEKSFILQEGDPIDMMLFIMKGKLATIITCDWKNDPYLATLNAGDFCGEELVQWAMDPTSTTSLPISQRTVKTLTEVEAFSLKANELKSVTSQFHFQRLNSKQFQLSVRFYSHQWKVWAAYKIQEAWHDYRERRRRGGGDGRFQDALAKTIGASASFSATLYASIFISHLLQAVQREQHQQTAQVTRVMTLPPPPKPDDEQDKPNFTILDL 1381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 919821 929708 - CePI673135_05g001030.1 Cec05g0103 201906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0103 1381 Gene3D Jelly Rolls 460 574 IPR014710 -
Cec05g0103 1381 Gene3D Jelly Rolls 1147 1265 IPR014710 -
Cec05g0103 1381 Pfam Ion transport protein 765 1074 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g0103 1381 Pfam Ion transport protein 105 413 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g0103 1381 ProSiteProfiles cAMP/cGMP binding motif profile. 458 526 IPR000595 -
Cec05g0103 1381 CDD CAP_ED 1149 1281 IPR000595 -
Cec05g0103 1381 SUPERFAMILY cAMP-binding domain-like 406 527 IPR018490 -
Cec05g0103 1381 MobiDBLite consensus disorder prediction 1359 1381 - -
Cec05g0103 1381 SUPERFAMILY Voltage-gated potassium channels 750 1071 - -
Cec05g0103 1381 FunFam Cyclic nucleotide-gated ion channel 1 1076 1140 - -
Cec05g0103 1381 SUPERFAMILY cAMP-binding domain-like 1079 1265 IPR018490 -
Cec05g0103 1381 MobiDBLite consensus disorder prediction 1366 1381 - -
Cec05g0103 1381 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 740 1343 - -
Cec05g0103 1381 Gene3D - 762 1073 - -
Cec05g0103 1381 ProSiteProfiles cAMP/cGMP binding motif profile. 1149 1232 IPR000595 -
Cec05g0103 1381 SMART cnmp_10 1149 1279 IPR000595 -
Cec05g0103 1381 Gene3D Helix hairpin bin 402 451 - -
Cec05g0103 1381 Gene3D Helix hairpin bin 1076 1140 - -
Cec05g0103 1381 SUPERFAMILY Voltage-gated potassium channels 92 411 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0103 Cec-Chr5:919821 Cec10g1481 Cec-Chr10:29194528 9.30E-162 dispersed
Cec05g0103 Cec-Chr5:919821 Cec05g0105 Cec-Chr5:931543 1.40E-109 proximal
Cec05g0103 Cec-Chr5:919821 Cec05g0106 Cec-Chr5:933282 1.90E-98 proximal
Cec05g0103 Cec-Chr5:919821 Cec05g0104 Cec-Chr5:931116 1.90E-37 tandem
Cec01g0049 Cec-Chr1:410925 Cec05g0103 Cec-Chr5:919821 2.20E-191 wgd
Cec05g0103 Cec-Chr5:919821 Cec05g1049 Cec-Chr5:9204755 1.70E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0103 K05391 - csv:101206492 1148.65