Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0128 ATGGGAACTAGTGAAGAGGCGAAGTCTGTGAAGACTGAAAAACCATCCTCACCAACACCGGATCAGAATAGTGTGCCGAATTCAGCCAGTATTCATGTTTTTCCTGATTGGGCCGCCATGCAGGCATATTATGGTCCTAGAGTTGCAGTTCCACCATACTACAACTCTGCTGTGGCTTCAGGTCATGCTCCTCACCCTTATATGTGGGCTCCACCACAGATGATTCCTCCATATGGTACTCCTTATGCTGCAATCTATTCTCATGGAGGTGTTTATGCCCATCCTGCAGTTTCTATGGGACCACATTCACATGGCCCTGGTGTTCCCTCATCACCTGGGGCTGCACCTCCTTTGAGTATTGAAACACCTTCAAAGGTATCTGGAAATAGCAGTCAAGGTTTAATGAAGAAACTGAAAGGTTTCGATGGCCTGGCAATGTCCATAGGCAATGTTAGCACTGAGACTGCTGAAGGGGGAGCTGAGCATGGACAATCAGAGAGTATGGAAACTGAAGGTTCCAGTGATGGAAGTGATGGAACTACTGCTGGGGCAAATCAAACCAAAAGGAAACGAAGCCGTGAGGGAACACCTACCACTGGTAAGGATGCAAAAATTGAGCCACAGGCAAGTCCAGTTACTGCTGCTGAAATGAACGAAAGCTCTAGCAAATTATTGGGCACGACCAAAGCAGCTAATGCGACTGGAAAACTTGGATCTGTGATTTCTCCTGGAATGTCTACTGCATTGGAACTGAGAAATCCTTCCAGTATAAATGCCATGACAAGTCCAACGACGGTTCCACCTTGTTCAGTACTGCCTTCTGAAGTCTGGCTCCAGAATGAAAAAGAGCTAAAACGGGAAAGGAGAAAACAGTCGAATAGAGAATCCGCTAGGAGGTCAAGGTTGAGGAAGCAGGCTGAGACAGAGGAACTAGCTCGTAAAGTTGATTCGCTGACTGCCGAGAATGTCGCTATTCGATCTGAAATAAGTAGATTGTCAGAGAACTCCGAGAAACTTAAGAAAGAAAATTCTACCTTGATGGAAAAGCTTAAAAGCGCTCAATCAGGACGAACAGAAGCATTAGACATGAATGAAAAGAGGATGCAACAACCTGTAAGCACAGAAACCAAAGGACCTGTGAATAAAAGCATTAACGAAGAGAGTATCATCTGCAAGAAAAACTCGAGTTCGGGTGCAAAACTGCGGCAGCTCTTGGATACGAGTCCGAGGGCGGATGCAGTCGCTGCTAGCTAA 1254 46.09 MGTSEEAKSVKTEKPSSPTPDQNSVPNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVASGHAPHPYMWAPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPGAAPPLSIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVSTETAEGGAEHGQSESMETEGSSDGSDGTTAGANQTKRKRSREGTPTTGKDAKIEPQASPVTAAEMNESSSKLLGTTKAANATGKLGSVISPGMSTALELRNPSSINAMTSPTTVPPCSVLPSEVWLQNEKELKRERRKQSNRESARRSRLRKQAETEELARKVDSLTAENVAIRSEISRLSENSEKLKKENSTLMEKLKSAQSGRTEALDMNEKRMQQPVSTETKGPVNKSINEESIICKKNSSSGAKLRQLLDTSPRADAVAAS 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1118146 1121420 + CePI673135_05g001280.1 Cec05g0128 201931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0128 417 SUPERFAMILY Leucine zipper domain 284 340 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec05g0128 417 MobiDBLite consensus disorder prediction 213 242 - -
Cec05g0128 417 MobiDBLite consensus disorder prediction 279 312 - -
Cec05g0128 417 Coils Coil 301 356 - -
Cec05g0128 417 MobiDBLite consensus disorder prediction 1 29 - -
Cec05g0128 417 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec05g0128 417 Pfam Disordered region downstream of MFMR 132 263 - -
Cec05g0128 417 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Cec05g0128 417 MobiDBLite consensus disorder prediction 153 186 - -
Cec05g0128 417 MobiDBLite consensus disorder prediction 332 381 - -
Cec05g0128 417 MobiDBLite consensus disorder prediction 101 134 - -
Cec05g0128 417 MobiDBLite consensus disorder prediction 367 381 - -
Cec05g0128 417 MobiDBLite consensus disorder prediction 13 29 - -
Cec05g0128 417 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec05g0128 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec05g0128 417 FunFam G-box binding factor 3 284 339 - -
Cec05g0128 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec05g0128 417 SMART brlzneu 281 345 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec05g0128 417 Gene3D - 284 337 - -
Cec05g0128 417 PANTHER G-BOX-BINDING FACTOR 3-RELATED 14 375 IPR044827 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0043565(InterPro)
Cec05g0128 417 MobiDBLite consensus disorder prediction 153 242 - -
Cec05g0128 417 MobiDBLite consensus disorder prediction 395 417 - -
Cec05g0128 417 MobiDBLite consensus disorder prediction 332 347 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0128 Cec-Chr5:1118146 Cec10g0134 Cec-Chr10:1234836 2.10E-24 dispersed
Cec05g0128 Cec-Chr5:1118146 Cec09g1151 Cec-Chr9:11351286 4.10E-28 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29476 PF16596 MFMR_assoc 8.40E-22 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0128 K09060 - csv:101213720 733.406