Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g0161 | ATGATTCGCCGGAATCCTCCATTGCTGGGGTTTTCCGATGAGGTCAATGCCCTTAAAACCTCTGATTTGCTTTCCTTAGTTCCTCCTCTTTCCCTCTCTGAATCGATCGAAGAAGAAGAAATGTCAGTTTACGATGCTGCATTTGTGAACACGGAGCTCTCTAAACCCACCTCGATTTTCGGCCTTCGTCTCTGGGTTGTTATCGGAATCTTTGTCGGAGCTCTAATAGTTCTCGCACTGTTTCTTCTTTCACTCTGCCTGACTTCTCGCAAGCGGAACCGCCATAAGAACCAAATCCGTTTTCCTAAGTCCACAACCCACCATTCTCCTCCTGCTGTTTCCAAAGAGATCCAGGAGATCGTCCACCACGCCGTGCCGGATCATCATCACCATGTTCAGCCGGAAATTCATGTCGAGATCGGGAAATTGGAGCATCGGGTTGTTTTCTCTGATAGACCTTCTAGTGGTGAGAGTAGAGGCACTGTGAGTGAAACTGCTTCTTTTGGATCTGGTACTGTTGGGCCTGAGGTTTCACACCTCGGTTGGGGCAGATGGTATACTCTCAGAGAGCTCGAGGCGGCCACTAATGGCTTGTGTGAAGAGAATGTGATTGGAGAAGGTGGATATGGGATCGTATATTTAGGCATTTTAGGAGATGGTACCAGAATTGCTATCAAGAATCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTGGAAGTAGAAGCAATTGGACGCGTAAGACACAAGAATCTTGTCAGGTTGCTGGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTATGAGTACGTTAACAATGGCAATTTAGACCAATGGCTTCATGGCGATGTTGGGGATGTGAGCCCTTTGACGTGGGAGATTCGTGTTAACATCATACTTGGCACAGCAAAGGGATTAGCCTATCTTCATGAGGGTCTTGAACCAAAGGTTGTTCATCGTGATGTAAAATCAAGCAACATACTGCTTGATCGTCACTGGAATGCTAAAGTATCTGATTTTGGGCTGGCCAAGCTTCTTTGTTCTGAAAGAAGCTATGTGACAACTCGTGTAATGGGCACATTTGGCTATGTTGCACCTGAGTACGCCTGCACTGGAATGTTGAATGAAAAGAGTGATGTTTATAGCTTTGGAATTCTGATTATGGAGATAATTTCCGGGCGGAGCCCTGTTGATTACAGTAGACCTCAAGGAGAGGTAAATTTGGTGGATTGGTTGAAAGCAATGGTTGGTGACAGAAAATCTGAGGAAGTGGTTGACCCCAAGTTGCCGGAGAAGCCTCCTTCCAAAGCTCTCAAACGTGTTTTGCTGGTTGCTCTTCGTTGTGTCGATCCTGATGCTACAAAGAGGCCGAAAATGGGACACGTCATTCACATGCTCGAGGCAGATAATTTGCTGTCTCATGATGAACACCGGGTTGGTAAGGACTCTTCTCATTCAATTCAAGGCCATCAACATGAGAACCGGGCCGTTCCAAGACGAGTTAACAATCAGAAAGATGAACAGGCATCTTCTAATGTATGTGAAGGTGACAGTGATGGAAACATTCACCATCCAACAAGTTTGGTAGAGACATCTCCAACTGTAACCTCTACTTCATGTGCTCTTTTGCTCTGTTCTGACTGGACCAGTAAGGCTAAGATGTGGACTAGAACTGAGGCATTCGCCTTCGAAACCACGACGGGATTTTGTCTGATCTTCACGTTAGGCTGCCGAAGTCTCATCCTAAGCTGGCTGTGGATGCTTCCGAAAGGATCAGATCAATCCTTTGGTTTATGTGCAACCATACATTGTCTTTTCGAGGACTCTGTCAAACTCAAAGCCTTTGGGAGTTTCTTCAAAACCCTTTATCCAAAGCTTGCTTTTAGAGGTGAAGTTGAAACAAGCACAAAGCACTTGGTAGCTGTAGTTTATACTTGGAAGGTTATCACCGGCTTTATCATCATCAATTCACAAACACAGCTCCGCTCATTGCCACCACGCGAGAATTCAACGTTTTCTGGCTGCGATACTTTCTTAGAAATTGCCTTTGCTTTCTTGTTTCTGAATCTGTGTTATATAATGAGCAGACCACAAGAGCCGCACCGGCCCTTCTTTCCTTTTGGGAATCCTTTCCGTGCAATATCACCAAAGGGTTCAAAATTGTCTTCTAGACTTGTTTTTCTTTTAGCTACTTTTGAGGATTCCTTGGCAGAGAGGCTGAAAAAGCTTACTCCAAAATCGGAGAATGACATACTCAGCTTCTCATGGATGGAATTAGCATTGAAGCTGCTGTACGAAACTCACAACGATGTAAAAACCCTTATAGAAGAGCTTGGGTTCCCCGTATCTGATTGGGATGAGAAATGGCTAGATGAGTACCTGAACATCAGTGTGAAATTACTTGATATATGCAATGATTTTAGCTCTGAGCTCTCACAGTTGAATCAAGGTCATCTGATACTTCGGTGTGCCTTGCACAATCTGGAATCTACATCTTCCAACCAGTTTGTTCATGCCCGTTCTTCGCTAGATGCATGGAATCAACATATTAGTTCCAGAACCTCCAGAGTTGAAAGCTGTGCTCCTATTTTGGACTGTCTTGGGGAATCACTTGATCTTCCAAAGGTTAAGAACTCATCCAAAGGCAAGGTTTTGATGCATGTGTTGTACGGAGTGAAGGTGGTGACTTTGTTTATTTGCAGTGTTTTTGCTTCTGCCTTCTCAGGTTCTTCCAAAAGGTTGTTACCCACCAATGTTCCAGATACATTCAGATGGGCACACGCATTTACTGAATTACAGAAAAATGTAAATATGGAAATTAAGAATATTTATTCTAGTGGAAGGTTTACTGCGTTGAGAGATGTTGATGCAGTTGATGGGAGTGTAAAAAAACTACATTCCATGATTCAAGGTAATATGGATGGCTGCATGAAAGTGGAAGAATTCCAGAATTTGATTGTAGATTTGAGGAGGGAGGCAGAGAAGCTTACACAAGGTGTTGATCGTCTTACAAAACAAGTTGACGAGTTTTTTCACATTGTTTTATCTGGACGTGATGCATTGCTTTCAAATCTTAGAGCAAGTGAAACAGAATTTGATCGGGGAATTGGGTGGCTGTCTACAAGGCAACTGTGA | 3144 | 43.77 | MIRRNPPLLGFSDEVNALKTSDLLSLVPPLSLSESIEEEEMSVYDAAFVNTELSKPTSIFGLRLWVVIGIFVGALIVLALFLLSLCLTSRKRNRHKNQIRFPKSTTHHSPPAVSKEIQEIVHHAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGTVSETASFGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLDQWLHGDVGDVSPLTWEIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRHWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIISGRSPVDYSRPQGEVNLVDWLKAMVGDRKSEEVVDPKLPEKPPSKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLSHDEHRVGKDSSHSIQGHQHENRAVPRRVNNQKDEQASSNVCEGDSDGNIHHPTSLVETSPTVTSTSCALLLCSDWTSKAKMWTRTEAFAFETTTGFCLIFTLGCRSLILSWLWMLPKGSDQSFGLCATIHCLFEDSVKLKAFGSFFKTLYPKLAFRGEVETSTKHLVAVVYTWKVITGFIIINSQTQLRSLPPRENSTFSGCDTFLEIAFAFLFLNLCYIMSRPQEPHRPFFPFGNPFRAISPKGSKLSSRLVFLLATFEDSLAERLKKLTPKSENDILSFSWMELALKLLYETHNDVKTLIEELGFPVSDWDEKWLDEYLNISVKLLDICNDFSSELSQLNQGHLILRCALHNLESTSSNQFVHARSSLDAWNQHISSRTSRVESCAPILDCLGESLDLPKVKNSSKGKVLMHVLYGVKVVTLFICSVFASAFSGSSKRLLPTNVPDTFRWAHAFTELQKNVNMEIKNIYSSGRFTALRDVDAVDGSVKKLHSMIQGNMDGCMKVEEFQNLIVDLRREAEKLTQGVDRLTKQVDEFFHIVLSGRDALLSNLRASETEFDRGIGWLSTRQL | 1047 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1373772 | 1383216 | + | CePI673135_05g001610.1 | Cec05g0161 | 201964 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g0161 | 1047 | MobiDBLite | consensus disorder prediction | 506 | 520 | - | - | |
Cec05g0161 | 1047 | CDD | STKc_IRAK | 204 | 470 | - | - | |
Cec05g0161 | 1047 | Pfam | Protein BPS1 | 788 | 1007 | IPR004320 | GO:0048364(InterPro)|GO:0048367(InterPro) | |
Cec05g0161 | 1047 | SMART | serkin_6 | 198 | 469 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g0161 | 1047 | SUPERFAMILY | Protein kinase-like (PK-like) | 177 | 470 | IPR011009 | - | |
Cec05g0161 | 1047 | MobiDBLite | consensus disorder prediction | 151 | 170 | - | - | |
Cec05g0161 | 1047 | FunFam | Probable serine/threonine-protein kinase At1g01540 | 178 | 273 | - | - | |
Cec05g0161 | 1047 | MobiDBLite | consensus disorder prediction | 480 | 505 | - | - | |
Cec05g0161 | 1047 | Pfam | Protein tyrosine and serine/threonine kinase | 201 | 468 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g0161 | 1047 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 320 | 332 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g0161 | 1047 | Coils | Coil | 982 | 1009 | - | - | |
Cec05g0161 | 1047 | PANTHER | OS01G0323000 PROTEIN | 47 | 511 | IPR052232 | - | |
Cec05g0161 | 1047 | MobiDBLite | consensus disorder prediction | 480 | 525 | - | - | |
Cec05g0161 | 1047 | Gene3D | Phosphorylase Kinase; domain 1 | 180 | 273 | - | - | |
Cec05g0161 | 1047 | FunFam | Putative receptor-like serine/threonine-protein kinase | 274 | 484 | - | - | |
Cec05g0161 | 1047 | ProSitePatterns | Protein kinases ATP-binding region signature. | 204 | 226 | IPR017441 | GO:0005524(InterPro) | |
Cec05g0161 | 1047 | Gene3D | Transferase(Phosphotransferase) domain 1 | 274 | 486 | - | - | |
Cec05g0161 | 1047 | ProSiteProfiles | Protein kinase domain profile. | 198 | 475 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g0161 | 1047 | MobiDBLite | consensus disorder prediction | 154 | 170 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0544 | Cec-Chr2:5220020 | Cec05g0161 | Cec-Chr5:1373772 | 2.30E-137 | dispersed | |
Cec04g1381 | Cec-Chr4:33448330 | Cec05g0161 | Cec-Chr5:1373772 | 1.90E-165 | dispersed | |
Cec05g0161 | Cec-Chr5:1373772 | Cec08g1662 | Cec-Chr8:27947811 | 4.60E-169 | dispersed | |
Cec11g0592 | Cec-Chr11:6499016 | Cec05g0161 | Cec-Chr5:1373772 | 1.50E-49 | dispersed | |
Cec09g1001 | Cec-Chr9:9684746 | Cec05g0161 | Cec-Chr5:1373772 | 3.60E-10 | transposed | |
Cec05g0161 | Cec-Chr5:1373772 | Cec05g1002 | Cec-Chr5:8799995 | 8.00E-73 | wgd | |
Cec05g0161 | Cec-Chr5:1373772 | Cec06g0354 | Cec-Chr6:4067150 | 5.10E-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71968 | PF07714 | PK_Tyr_Ser-Thr | 1.10E-44 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g0161 | - | - | - | 0.0 |