Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g0169 | ATGGCATCAAGTTTGGGAGGGGCATCGATGTCACAAACAGATGATTTCGAGACGTTCACTCCAACGACTGATGTTGAGCCTCTAAAGAGGGCCTGGCGTAATGAGAAGGCTGCTCCTGAGATTCTACTCTTTGAGGGATCTTTGGTTGGGAGAATCAAAGAGCAGATTCAGTCAATGGAAGAGACTATAGAGGAATATTCAAGAAGTGGTATCGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTGTTGAGATCGTATGTTAGGAGTCGTTTGCAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCCAAAGAAGAGATAACGTTTACTGATAGGTGTCGTCATGATATGAAAAAACATCTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACATTCGTGGTCTGCAAAAGTAAGGAATATCTTGAACATATCCAGCTTGAGGATGAGGAAGAGAGGGCATCCAGTAGAATCTTTCGACATGGGTGA | 609 | 41.22 | MASSLGGASMSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILLFEGSLVGRIKEQIQSMEETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYVRSRLQKIEKYMLYILKSDELFRRLSKEEITFTDRCRHDMKKHLDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIFRHG | 202 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 1419383 | 1422571 | - | CePI673135_05g001690.1 | Cec05g0169 | 201972 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g0169 | 202 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Cec05g0169 | 202 | PANTHER | SLD5 PROTEIN | 11 | 192 | IPR008591 | GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro) | |
| Cec05g0169 | 202 | Pfam | GINS complex protein helical bundle domain | 75 | 137 | IPR021151 | - | |
| Cec05g0169 | 202 | CDD | GINS_A_Sld5 | 24 | 142 | IPR038749 | - | |
| Cec05g0169 | 202 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Cec05g0169 | 202 | Gene3D | - | 10 | 200 | - | - | |
| Cec05g0169 | 202 | FunFam | DNA replication complex GINS protein SLD5 | 9 | 198 | - | - | |
| Cec05g0169 | 202 | Coils | Coil | 49 | 69 | - | - | |
| Cec05g0169 | 202 | SUPERFAMILY | GINS helical bundle-like | 20 | 154 | IPR036224 | - | |
| Cec05g0169 | 202 | PIRSF | GINS_Sld5 | 1 | 197 | IPR008591 | GO:0006261(InterPro) |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g0169 | K10735 | - | csv:101210888 | 365.925 |