Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g0256 | ATGGTGCTCTTAAATGGAACCTCAGTTGCATCAGCTGCCTTCAGTAAGCTTTGCTTAGCTTTTCCTGAAAGAACGCAAGCAAGCAAGGCTGAGATGAGCTCGAGGCACAGCCGCGGAAGTTGCCCAGAAGGCAAAGGTGGTGGACCGTGTGGGGCGTGCAAATTTCTGCGGAGGAAGTGTATGCCAGAGTGTATATTTGCACCCTACTTCGACTCCGAACAAGGTACAACTCATTTTGCAGCCGTGCACAAGGTGTTCGGAGCCAGCAATGTGTCGAAGATGCTTCTACACATTCCTGAACACAAACGGCTCGACGCAGCTATAACTATATGTTACGAGGCACAAGCTCGAGTCAGAGAGCCAGTTTTTGGCTGTGTTGCTCATATCTTTGCCCTCCAACAACAGGCTGCAAGGTTGCAAGTAGAGATCTCGTATTTGCAAGCGTACCTAGCAACATCTGAGCTTCCAAGACCCGCACCCAATCTACAGGCACAGCCACCAGCTCTAGTCAAGAAGCCAACTCTATCCTCAATTGTAAACCTTCCATCAGATTGCCCTTCTTTTCCTGCTGAATCAGATCTTTCTCGACTTCTCGATCCCATCGAGCAAGCTTCACGGCCAAAGTTGCAGTCTCCCTTGGAATTGTCCCAAATTGGAAGCAACAGTTTCCCATCCATGGGCAGCATTGATCAACAAATCGTCCAAAAACAACTGGCCTCAATGCAACACATTGGTGCCTCGCTATTTCCGTGCGTCCCCAAACGAGCCTAA | 771 | 49.42 | MVLLNGTSVASAAFSKLCLAFPERTQASKAEMSSRHSRGSCPEGKGGGPCGACKFLRRKCMPECIFAPYFDSEQGTTHFAAVHKVFGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVEISYLQAYLATSELPRPAPNLQAQPPALVKKPTLSSIVNLPSDCPSFPAESDLSRLLDPIEQASRPKLQSPLELSQIGSNSFPSMGSIDQQIVQKQLASMQHIGASLFPCVPKRA | 256 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2098141 | 2102540 | - | CePI673135_05g002560.1 | Cec05g0256 | 202059 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g0256 | 256 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 45 | 168 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Cec05g0256 | 256 | Pfam | Lateral organ boundaries (LOB) domain | 49 | 147 | IPR004883 | - | |
Cec05g0256 | 256 | ProSiteProfiles | LOB domain profile. | 48 | 150 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0256 | Cec-Chr5:2098141 | Cec07g0122 | Cec-Chr7:1292853 | 5.40E-39 | dispersed | |
Cec05g0256 | Cec-Chr5:2098141 | Cec06g0038 | Cec-Chr6:382522 | 1.60E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29491 | PF03195 | LOB | 1.90E-36 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g0256 | K21994 | - | csv:101216934 | 396.741 |