Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0261 ATGGACTTCCAAGCTCACTCTCTGAAAAGCTCCGACGATTCGTCAACGTCTTCGAAGCTGGTTCTTTATTCTTTCTGGCGGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAACCTCAAAGGGCTTTCTTACGAGTACAGAGCCGTAAACCTTGGGAGAAGAGAACAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTTAAATATGTTCCTGTATTAGTAGATGGTCCTGTGGTAGTTTCAGACTCTTACGCGATTTTGCTGTATCTGGAAGAGAAATATCCACAGAAGGCGCTGCTGCCTGCTGATCTTCGTTTAAAATCTCGTAATCTGCAAGTGGGAAGTATCATCAGCTCAAGCATACAGCCTGTCATAATGATGGGATTGCTGAAAACTATCGAGGAAAAATTTGGTCCAGAAGAGCAACTGCCATGGGCTCAGTCCAATTTAGAAAAAGGTTTCAATGCTCTTGAGAAACTGCTGAAGGATTTTTCTGGCCAATATGCCTTGGGAGATGAAGTATATATGGCTGATGTGTTTTTGGCCCCCCAAATTTCAAATGCTATTGAGAACTTCGACACCGACATGTCTAAGTTTCCTACCTTAGCAAGGATTTATGAATCTTACAAGAAGTTACCAGAATTCCAAGCCTCGTTCAATCACGTTATAAAGATTGTCCGTCTAGCTCAGCCAGTAGAGCGCAAGCCTCTTAACCTTGTGGTTGTGGGTTTGAGCCCCACGGTGGGGGAGGTTCAATCACAAAATCAAGATTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAA 813 44.65 MDFQAHSLKSSDDSSTSSKLVLYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRREQLSPDFERLNPLKYVPVLVDGPVVVSDSYAILLYLEEKYPQKALLPADLRLKSRNLQVGSIISSSIQPVIMMGLLKTIEEKFGPEEQLPWAQSNLEKGFNALEKLLKDFSGQYALGDEVYMADVFLAPQISNAIENFDTDMSKFPTLARIYESYKKLPEFQASFNHVIKIVRLAQPVERKPLNLVVVGLSPTVGEVQSQNQDCPSSSVGRAQGS 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2150428 2153885 + CePI673135_05g002610.1 Cec05g0261 202064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0261 270 Gene3D - 101 223 - -
Cec05g0261 270 NCBIfam maleylacetoacetate isomerase 22 219 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Cec05g0261 270 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 233 IPR010987 -
Cec05g0261 270 SFLD Glutathione Transferase (cytosolic) 20 210 IPR040079 -
Cec05g0261 270 Gene3D Glutaredoxin 22 98 - -
Cec05g0261 270 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 99 IPR004045 -
Cec05g0261 270 SFLD Main (cytGST) 20 210 - -
Cec05g0261 270 PANTHER MALEYLACETOACETATE ISOMERASE 18 220 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Cec05g0261 270 CDD GST_N_Zeta 21 92 IPR034333 -
Cec05g0261 270 FunFam Glutathione S-transferase Z1 18 102 - -
Cec05g0261 270 FunFam Maleylacetoacetate isomerase 103 223 - -
Cec05g0261 270 SUPERFAMILY GST C-terminal domain-like 100 222 IPR036282 -
Cec05g0261 270 Pfam Glutathione S-transferase, N-terminal domain 22 98 IPR004045 -
Cec05g0261 270 Pfam Glutathione S-transferase, C-terminal domain 144 216 IPR004046 -
Cec05g0261 270 SUPERFAMILY Thioredoxin-like 18 102 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0038 Cec-Chr2:407467 Cec05g0261 Cec-Chr5:2150428 9.80E-69 dispersed
Cec05g0261 Cec-Chr5:2150428 Cec05g0427 Cec-Chr5:3498118 1.80E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0261 K01800 - csv:101213403 374.785