Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0277 ATGCCCTTCCCCGTCGCTACCTTTCTACTCCTCTTCCTACCCCTGGTAGTGGTGGCTTCCTCTATTTCTTCGTTGCCCGACCCGGGCCCGGTTCGGTTGGCCCAGACCGGGGTTGCGGAAGCCAGAACCGAAATAGGTAAGTTAAAACGACGTCGATTTGGGCTTGGCGATTGCTCTACGCTCTACGAGGAGGCGGACTGGCGGCTCGCCGGGATGTTGGTTGGAGAGAATTATACGGCGGAAGATGCTCGGGCGTGGCTTAGCGCCGCCGTGGCTAACCATCGGAGTTGTTTGGATGGCTTGGAAGAGGTTGGTGCCTCGACGGCGGTGGAATATGGGAATAACTTGACCATGATGCTCACCGAAGCTCTGCATTTATACGACAAGATGGCTGCCGTGGAGAAGCGGAAGGGAAGGGAAGTAGTGAAGAAACAGAAATGGAGAGAAAACAGAGGAATGGACCTGGCGAAGTGGAATCCGGTGACCTCGAAGGCAGACTACGTGGTGGCGAAGGACGGATCCGGCACCCACACAACCATAAACGGGGCGGTGGCGACTCTGGCGAGGACTGGACGGAGACGGCGGGGGGAGAGAATTGTGATATACGTGAAAGCCGGTGTTTACAAGGAAAATGTGGAAATTGGAATACAGTTGAAGAACGTCATGGTTGTTGGTGACGGCGCAGACAAAACCATCGTCACCGGTAGCCGCAACGTGCCCGACGGTGCCACCACTTATAACTCAGCTACATTTGGTGTTTCCGGCGACGGATTTTGGGCGAGGGACATAACTTTCGAGAACACAGCCGGACCGGAAAAGCAACAGGCGGTGGCGCTACGGCTGAATTCCGACCTTGCCGTCGTATATCGGTGCGCAATAAAAGGTTATCAGGACACGCTCTTCCTCCACTCCCTCCGCCAATTCTACCGCGACTGCCAAATCTACGGCACCATCGATTTCATTTTCGGGAACTCCGCCGCCGTCCTCCAGAACTGCGAAATCTTCGTCCGACGACCGATTCGCCACCAGGCTAACATGATCACTGCCCAAGGTCGTGACGATCCGGCCGAGCCCACCGGAATTTCCATCCTCAACTCCAGCGTCCAGCCGGCGCCGGATTTCGCACCCGTAAAGGCTCAATATAGAACCTACCTCGGCCGCCCGTGGAAGCGGTTTTCGAGGACGGTGGTTATGGCGACAGATTTGGACGGATTGATCGATCCGAAAGGGTGGGGAGAATGGAGGGGGGATTTTGCGATTTCGACTTTGTTTTATGCAGAGTTTAAGAACAGGGGCGGCGGTTCTTCGACGAGATTTAGGGTTAATTGGCCGGGGTTTCACGTCCTCCATAGCGCGGAGGAGGCGCGACCTTTCACGGTGGCTGAGTTTCTTCACGGCGGCGCTTGGATTCCGGCCACCGGCGTACCCTTCGAGGCGGGCGTTTGA 1446 56.36 MPFPVATFLLLFLPLVVVASSISSLPDPGPVRLAQTGVAEARTEIGKLKRRRFGLGDCSTLYEEADWRLAGMLVGENYTAEDARAWLSAAVANHRSCLDGLEEVGASTAVEYGNNLTMMLTEALHLYDKMAAVEKRKGREVVKKQKWRENRGMDLAKWNPVTSKADYVVAKDGSGTHTTINGAVATLARTGRRRRGERIVIYVKAGVYKENVEIGIQLKNVMVVGDGADKTIVTGSRNVPDGATTYNSATFGVSGDGFWARDITFENTAGPEKQQAVALRLNSDLAVVYRCAIKGYQDTLFLHSLRQFYRDCQIYGTIDFIFGNSAAVLQNCEIFVRRPIRHQANMITAQGRDDPAEPTGISILNSSVQPAPDFAPVKAQYRTYLGRPWKRFSRTVVMATDLDGLIDPKGWGEWRGDFAISTLFYAEFKNRGGGSSTRFRVNWPGFHVLHSAEEARPFTVAEFLHGGAWIPATGVPFEAGV 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2278725 2281639 - CePI673135_05g002770.1 Cec05g0277 202080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0277 481 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 131 IPR035513 -
Cec05g0277 481 SUPERFAMILY Pectin lyase-like 162 479 IPR011050 -
Cec05g0277 481 Gene3D - 160 481 IPR012334 -
Cec05g0277 481 Pfam Pectinesterase 167 466 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec05g0277 481 PANTHER PECTINESTERASE 52 472 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cec05g0277 481 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 128 IPR035513 -
Cec05g0277 481 SMART PMEI_2 13 126 IPR006501 GO:0004857(InterPro)
Cec05g0277 481 Pfam Plant invertase/pectin methylesterase inhibitor 32 120 IPR006501 GO:0004857(InterPro)
Cec05g0277 481 ProSitePatterns Pectinesterase signature 2. 314 323 IPR033131 -
Cec05g0277 481 FunFam Pectinesterase 160 481 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0277 Cec-Chr5:2278725 Cec05g0879 Cec-Chr5:7607139 1.30E-107 dispersed
Cec05g0277 Cec-Chr5:2278725 Cec05g0278 Cec-Chr5:2294046 1.60E-100 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0277 K01051 - csv:101217635 782.711