Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0285 ATGCTCTCTTCACATTTCCTACCTTCGAAAAACCCTATTTCCACCAACCCCACTTCCCCTTTTTCCCTATTTTACCCAAATCTCCTCCCAACCGTCCGATCGAAATCTACCAATCGCCCACAAATCTCTGCCTTCTCCACCATTAATGGCGTCTCTTCAAAACCCACGTCTCAGATTCTCAATCCAATCCCCAAATCGAGCAGATTCTGCAAAAATCCAGTGAACCCATTTCGGTTTCTTCCGTGCAAACCTAAACCCTTTGTCCCCGCCGCCGCTGCCGCAGACGGCGGCGATACCACCGCTGATTCCGCCTCCAATGGTAAAACCTTTCAGCTCGCCATCGTCTTTGGGCTCTGGTATTTTCAGAACATCGTCTTCAATATCTACAACAAGAAGGTTCTCAACATTTTCCCTTTCCCATGGCTTCTCGCTTCGTTTCAACTCTTCGCTGGATCGGTTTGGATGCTCGTTCTTTGGTCCTTTAAGCTTCAGCCATGCCCTAAAATCTCAAAGCCCTTTCTAATCGCTCTCCTCGGCCCCGCTTTGTTTCACACAATCGGCCATATCTCTGCCTGCGTTTCGTTCTCAAAAGTCGCTGTTTCTTTCACTCATGTCATTAAATCGGCCGAACCGGTCTTCTCGGTTCTTTTCTCCTCGTTCCTCGGCGATTCGTATCCAATCCAGGTCTGGCTTTCGATTCTCCCCATTGTTTTTGGCTGCTCTTTGGCCGCCATTACTGAAGCTACCTTCAATTTTGAAGGTCTATCGGGCGCCATGATTAGCAATGTAGGGTTTGTGTTAAGAAACATTTACTCCAAAAGGAGCTTGCAGAACTTCAAGGAGGTTAATGGGTTGAATTTATATGGTTGGATTAGTATAATTTCTTTGTTGTATCTGTTTCCTGTGGCCATTATGGTCGAAGGGTCAAAATGGGTTCAAGGATATCATCAAGCAATTGCTTCCATTGGAAATGCTTCAACATTATACATCTGGGTTTTGATTTCTGGCATATTTTATCATCTTTATAATCAATCTTCGTACCAAGCTTTGGATGAGATCAGTCCTTTGACATTCTCTGTTGGGAATACAATGAAGAGAGTGGTTGTGATTGTGGCTTCTGTTTTGGTTTTTAGAAATCCAGTTAGGCCTTTAAATGCTGTTGGTTCTGCCATTGCCATTTTTGGGACTTTTCTGTATTCTCAGACAACAACTAAAAAGAGTGCTAAGAAGATTGAGGAAGGTGAAAAGAAGGAATGA 1257 44.15 MLSSHFLPSKNPISTNPTSPFSLFYPNLLPTVRSKSTNRPQISAFSTINGVSSKPTSQILNPIPKSSRFCKNPVNPFRFLPCKPKPFVPAAAAADGGDTTADSASNGKTFQLAIVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFAGSVWMLVLWSFKLQPCPKISKPFLIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVLFSSFLGDSYPIQVWLSILPIVFGCSLAAITEATFNFEGLSGAMISNVGFVLRNIYSKRSLQNFKEVNGLNLYGWISIISLLYLFPVAIMVEGSKWVQGYHQAIASIGNASTLYIWVLISGIFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVASVLVFRNPVRPLNAVGSAIAIFGTFLYSQTTTKKSAKKIEEGEKKE 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2358662 2359918 - CePI673135_05g002850.1 Cec05g0285 202088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0285 418 PANTHER SOLUTE CARRIER FAMILY 35 108 402 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Cec05g0285 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 401 - -
Cec05g0285 418 Pfam Triose-phosphate Transporter family 111 400 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1460 Cec-Chr1:29244422 Cec05g0285 Cec-Chr5:2358662 8.30E-62 dispersed
Cec05g0285 Cec-Chr5:2358662 Cec05g1631 Cec-Chr5:26008810 1.90E-86 dispersed
Cec05g0285 Cec-Chr5:2358662 Cec10g0534 Cec-Chr10:6427648 1.10E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0285 K15283 - csv:101219051 737.258