Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0299 ATGGCGGGCTTAGATTTGGGCTCTGCTTCTCACTTTGTTCATCAACTTCAGCACCGTTCCGTCGATCTTCACCTGCAGCATCCGACGGATGTAGACGACGGTTCCGACCACCATCCGAACTCCGGCGGCGAAATCGTCGCCCGGCGGTCCAGGGGCAGACCGCCCGGTTCTAAAAATAAACCGAAGCCACCGGTTATTATTACCAGAGAAAGCGCTAACACCCTCCGAGCCCACATCTTGGAAGTCAACTCCGGTTGTGATGTCTTTGACTCCGTCGCCACTTATGCTCGGAAGCGCCAGCGTGGCATCTGCATCTTGAGCGGCACCGGCGCCGTCACCAACGTTACCTTACGGCAACCTGCATCAGCCGGTGCCGTTGTCACTCTCCCTGGCAGGTTCGAGATACTGTCTTTGTCGGGATCGTTCTTACCGCCACCGGCTCCACCGGGAGCTACGAGTTTGACTATCTTCCTTGCGGGTGGGCAAGGACAAATCGTCGGCGGGAATGTTGTTGGATCTTTGATTGCTTCTGGACCGGTGATCGTCATTGCGTCGTCGTTTACCAATGTTGCTTACGAGAGGTTGCCGTTGGACGAGGAGGAACAACCGTCGAACGGTGGTGGTGGGAGCCTTAGCAACCCGTTTCCGGACCCATCGGCCGGGTTGCCGTTCTTTAATCTACCGTCGAGCATGGCGGGGAATCAAAATCAGCTGCCGGTGGACGGATGGGGTGGAGGAAACTCCGGTGGGAGAGCATCTTATTGA 765 56.73 MAGLDLGSASHFVHQLQHRSVDLHLQHPTDVDDGSDHHPNSGGEIVARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNSGCDVFDSVATYARKRQRGICILSGTGAVTNVTLRQPASAGAVVTLPGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEQPSNGGGGSLSNPFPDPSAGLPFFNLPSSMAGNQNQLPVDGWGGGNSGGRASY 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2458679 2459611 + CePI673135_05g002990.1 Cec05g0299 202102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0299 254 CDD DUF296 76 185 IPR005175 -
Cec05g0299 254 Gene3D - 75 203 - -
Cec05g0299 254 MobiDBLite consensus disorder prediction 26 65 - -
Cec05g0299 254 MobiDBLite consensus disorder prediction 199 254 - -
Cec05g0299 254 MobiDBLite consensus disorder prediction 26 44 - -
Cec05g0299 254 MobiDBLite consensus disorder prediction 228 242 - -
Cec05g0299 254 FunFam AT-hook motif nuclear-localized protein 75 202 - -
Cec05g0299 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 206 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec05g0299 254 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 188 IPR005175 -
Cec05g0299 254 ProSiteProfiles PPC domain profile profile. 72 214 IPR005175 -
Cec05g0299 254 SUPERFAMILY AF0104/ALDC/Ptd012-like 72 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0251 Cec-Chr5:2055573 Cec05g0299 Cec-Chr5:2458679 2.10E-57 dispersed
Cec05g0299 Cec-Chr5:2458679 Cec09g1211 Cec-Chr9:12651514 1.50E-78 dispersed
Cec10g0178 Cec-Chr10:1741462 Cec05g0299 Cec-Chr5:2458679 5.10E-13 wgd
Cec05g0299 Cec-Chr5:2458679 Cec06g0071 Cec-Chr6:674333 5.60E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0299 - - - 0.0