Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0334 ATGAGACCAAGTCTCACCCATCCATACCTTTTCCCCAATGGGCCGAGAAAAGCAAAGTCACGAAAGGCCCAAAAGGAAGCCTGGAAAGCCCAGCAAAAGAGTGGAAGAAGCCTTACGTATGAGGCTGAGATCCACAATGGTTTCGGCAAATCCTCCATTTCCTCAGCTTCCAAACAGAGCCAGCGGAACCCTTCCACTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCTTCTCTCTCCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGCTCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCCGCAGCTGCTTCCACCGACGATGCCTTTGTCTCCGCCTGGAAGAAGGTGATCCCCAACATTGACCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAGCTCACTGTCAACTTCGTCCTTCCTTATGCCTCCGAACTCTCGGCCAAAGAGGTTGACATGGTCATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCTACAATCGCCGAGTTAAAGCCAGGGGTTCTATCAGTACACGATGGGAGCGACATCAAAAAATACTTTGTCAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCTGTAGATCAAATCGATGCTAGCCAAGTACAGAAGGGTCTTGCTGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTTGACGTGCACAGTGCCCTGAATTCTGCCCTTACAGGATAG 867 51.21 MRPSLTHPYLFPNGPRKAKSRKAQKEAWKAQQKSGRSLTYEAEIHNGFGKSSISSASKQSQRNPSTSPSPSSSLSDLARAERPPSLSAMFRRASSLLARSFLSARTRSFSTDLPAAASTDDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2775606 2778157 + CePI673135_05g003340.1 Cec05g0334 202137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0334 288 Coils Coil 253 273 - -
Cec05g0334 288 FunFam ATP synthase delta 147 244 - -
Cec05g0334 288 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 158 229 IPR020546 GO:0015986(InterPro)
Cec05g0334 288 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 114 288 IPR001469 GO:0000275(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(PANTHER)|GO:0046933(InterPro)
Cec05g0334 288 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 158 239 IPR036771 -
Cec05g0334 288 MobiDBLite consensus disorder prediction 1 80 - -
Cec05g0334 288 FunFam ATP synthase subunit delta 245 287 - -
Cec05g0334 288 CDD F1-ATPase_delta 158 281 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Cec05g0334 288 Gene3D - 146 244 IPR036771 -
Cec05g0334 288 MobiDBLite consensus disorder prediction 48 78 - -
Cec05g0334 288 Hamap ATP synthase epsilon chain [atpC]. 156 276 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Cec05g0334 288 Gene3D - 245 287 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0334 K02134 - csv:101206104 350.517