Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0388 ATGGGTAGCGGAGAAAAGGTTTTCACCTTGAAGGAAGTCGCCGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGTGGCAAGGTATATGATGTGACCAAGTTCTTAGAGGACCATCCTGGTGGTGACGATGTTTTGTTATCAGCTACAGGAAAAGATGCAACCGACGACTTCGAAGACGTGGGCCACAGTGACAATGCAAGAGAGATGATGGATCAATACTATGTTGGGGAGATTGATGCTTCAACAATTCCAAAGAAGGTCGCCTACACACCTCCAAAGCAGCCTCATTACAATCAGGACAAGACATCCGAGTTCATCATCAGGCTTCTCCAATTCCTCGTCCCGCTTGCAATTTTGGGATTGGCAGTTGCCATACGCTTCTACACCAAACAAGCTTGA 405 46.91 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIRLLQFLVPLAILGLAVAIRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3177022 3179379 + CePI673135_05g003880.1 Cec05g0388 202191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0388 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cec05g0388 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cec05g0388 134 FunFam Cytochrome b5 type B 3 85 - -
Cec05g0388 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cec05g0388 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Cec05g0388 134 Gene3D - 2 86 IPR036400 -
Cec05g0388 134 PANTHER CYTOCHROME B5 5 131 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cec05g0388 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cec05g0388 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cec05g0388 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cec05g0388 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cec05g0388 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0020 Cec-Chr1:162483 Cec05g0388 Cec-Chr5:3177022 1.90E-46 dispersed
Cec05g0063 Cec-Chr5:665533 Cec05g0388 Cec-Chr5:3177022 4.40E-35 dispersed
Cec06g0285 Cec-Chr6:3204602 Cec05g0388 Cec-Chr5:3177022 1.00E-30 transposed
Cec06g0343 Cec-Chr6:3953754 Cec05g0388 Cec-Chr5:3177022 1.60E-09 transposed
Cec08g1076 Cec-Chr8:22598928 Cec05g0388 Cec-Chr5:3177022 2.30E-26 transposed
Cec11g0224 Cec-Chr11:2388326 Cec05g0388 Cec-Chr5:3177022 3.20E-15 transposed
Cec05g0388 Cec-Chr5:3177022 Cec06g0806 Cec-Chr6:9896161 3.30E-56 wgd
Cec05g0388 Cec-Chr5:3177022 Cec07g0236 Cec-Chr7:2358508 6.50E-28 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0388 K23490 - csv:101214209 274.248