Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g0435 | ATGTCAAGCATGCAACAATCCTTCGAGGCTGGCCAATCCCAAGGCCAAGCAGAGGCAAAGACTGAAGAATGGATTGAATCGGGGAAGGAAGCAGCAAACAAGGCATGTGACAACGCACCCAATGTTGCACAATGTGCTAAGGACTCTGCCCACCAAACCAAGCAAGAAACTTCCAATTTTCTCCAACAGACTGGAGAGCAAATGATGAATATGGCTCAAGATGTAGCAACTTTGTTCCACCAAATCCCGAACGCCACCCGCTTCCTACCCGCCGGAGCAATTCTCAATTCTCAATTCTCTTCTCTCTTCTCCCCCCAAAACCTTCTCTTCCAATCCCGCAGCACTCGCCGGAGCAACACCATTTCCGCCGACGGCACACCTTTCGTTCACCCCCACCTCCTCCTTCATTGCCATTGCCATTTCCTCATCAATGTCGGCTCATTAACTTCCCAACTCCAACCCTCCCGACACTCCAACCTCCATTCCTCCTCAATCCATCAATATTCCTCCACTGAGCACAACGAAACTCTTCTCCTTCAATCCCTTCATAACCCCTTATTCATGGTTTCTCGAATGAACGACAATGCCGGGCCAAGCAGAGCTCACCTTTTTCCATCTACATTCGGCGTTTCGCTTGGGATTCGCTACCTCGACCTTGGATCTGTGGCTGATCGAATTTCCCCCTCAATGGCTGGTCAAGTAAATCTAGTGGTTGGATCTCTTGTTTGGATTGAGGATCCTGAGGTAGCCTGGCTAGATGGGGAAGTCTTGGAAGTTAATGGTCAAGATATCAAAGTACTTTGTACAACAGGAACTACTGTTGAGGTCAAATCATCAAATGTCTATCCGAAGGATCCTGAATTTCCGCCATGTGGTGTGGATGATATGACAAAACTAGCTTATTTGCATGAGCCGGGGCTTCTACAAAATTTAAAATCTCGTTACGATGTTAATGAAATTTATACATATACTGGAAGTATACTAATAGCCGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAATCACATGATGCAACAATATAAAGGTGCAGCTTTAGGTGAGCTGAGCCCGCATCCCTTTGCCATTGCAAATTCTGCTTATAGACAGATGATTAATGAAAGTATCAGCCAGTCAATTTTAGTTAGTGGGGAAAGTGGTGCTGGCAAAACGGAGAGTACAAAGATGCTCATGCGCTATCTTGCCCATGTCGGAGGGAGAGCTGGAGGGAAGGCTGCAACTGGTGAACGTTCTGTAGAGCAGCAAGTACTAGAGTCCAACCCTGTTCTAGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGCCGGTTTGGTAAATTTGTGGAGATCCAATTTGATCAGAGTTGGAGAATTTCTGGAGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCCGAGAGGAATTATCATTGCTTCTATATGCTTTGTGCTGCACCAACAGAGGAAATTGAAAAGTATAAATTAGGGAATCCAAGAACATTTCATTACCTTAATCAATCTAATTGCTGCGAACTTGATGGAGTGGATGATTCCAAGGAATATCTTTCTACCAGGAAAGCCATGGATGTTGTTGGAATAAGTACAACTGAGCAGGATGCAATATTTCGAGTGGTAGCTGCGGTACTTCATTTGGGCAACGTTGAATTTGCAAAGGGGAAGGATGCAGATTCCTCTGAACCGAAGGATGACAAAGCTCGGTTCCATCTCAAAATGGCAGCAGAACTATTCATGTGTGATGAGAAGGCTCTTGAAGATTCAATGTGTACTCGTGTGATAGTTACACGTGATGAAACCATAACTAAATGTCTCGATCCAGACTCTGCATCTCTTAGTAGGGATGCTTTAGCAAAGATTGTTTATTCAAGATTATTTGATTGGATTGTTGATAAGATTAATAACTCAATTGGCCAAGATCCTCATTCAAAGAACTTAATTGGGGTTCTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGCTTTGAGCAATTCTGTATTAACCTGACCAATGAGAAATTGCAGCAACATTTCAACCAGCATGTGTTCAAGATGGAGCAAGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATTGAATTTATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGCGTCATTGCTCTTCTGGATGAGGCTTGCATGTTTCCGAGATCCACACATGACACTTTTGCGCAGAAACTATATCAAACTTTTAAGGACCATAAGCGTTTTAGTAAGCCGAAATTGTCACGAACTGACTTCACAATTTGTCATTATGCTGGTGATGTTACGTACCAAACTGAACTCTTCTTGGACAAAAACAAAGATTATGTTGTTGCGGAGCATCAAGCACTGTTGAGTGCTTCTAAGTGCCCCTTTGTTTCGGGGCTTTTCCCCCCCTTACCTGAAGAAACCTCCAAATCATCCAAGTTCTCATCAATAGGGACTCGATTTAAGCAACAACTTCAATCTTTGCTTGAGACACTAAATGCTACTGAGCCACACTACATACGCTGTGTAAAGCCAAACAATCTTCTTAAACCAGCCATCTTTGAGAACAATAATGTTTTACAGCAGCTCCGATGTGGGGGAGTCATGGAAGCAATCAGAATCAGTTGTGCTGGATATCCCACTAGGAAGACATTTGATGAATTTATTGGTCGGTTTACTATCTTGGCGCCTGATGTTTTGAAGGGGAGCTCTAATGAAGCCACTGCGTGTAAGAGGCTTTTGGAGAAAGTGAACCTTAAAGGGTATCAGATTGGTAAAACCAAAGTGTTTCTCAGGGCTGGTCAAATGGCAGAATTAGATGCTTGCCGAACTGAGGTTTTGGGAAGATCTGCTATTGTTATCCAAAGGAAAGTTCGCTCATATTTTGGGCGCAAAAACTTTATTTTGTTGCGGTTGGCTGCTATTCAAATTCAAGCCCTGTGTAGAGGGCAAGTTGCACGCCAGCATTATGAAGACATCAGAAAGGAAGCTGCTTCTATCAAAATCCAAAAGTATTGCCGTATGCATTTTGCCCGATGTTGCTATAAAAGATTGTGCTGTTCAGCTGTAGCTATTCAAGCTGGTATCCACGGTATGATTGCCCGCAAAGAGCTTGAGTTCAGGAGGCAGACAAGAGCTGCTATTATCATTCAGAGTCGATGTCGGCAATACTTGGCCCGCATGCATTATTTGAGGATAAAAAAAGCTGCAATTACTACTCAATGTGCTTGGAGAGGAAGAGTTGCACGCAAAGAACTTCGAAAGCTTAAAATGCTGAAGAAGATGTTCAAGGAGAAACTCCAGCTTAGCAAAAAGAAGGACAATAATAACATCATCACAAAAGTTGTTGGAGGTGGGGGGAAGGTGAGAACTGCTTTACAGCCAATGCCAGAAAACAGAATGACCATGGATGAATTGGAGAAGAGATTTTAG | 3495 | 42.75 | MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVAQCAKDSAHQTKQETSNFLQQTGEQMMNMAQDVATLFHQIPNATRFLPAGAILNSQFSSLFSPQNLLFQSRSTRRSNTISADGTPFVHPHLLLHCHCHFLINVGSLTSQLQPSRHSNLHSSSIHQYSSTEHNETLLLQSLHNPLFMVSRMNDNAGPSRAHLFPSTFGVSLGIRYLDLGSVADRISPSMAGQVNLVVGSLVWIEDPEVAWLDGEVLEVNGQDIKVLCTTGTTVEVKSSNVYPKDPEFPPCGVDDMTKLAYLHEPGLLQNLKSRYDVNEIYTYTGSILIAVNPFRRLPHLYDNHMMQQYKGAALGELSPHPFAIANSAYRQMINESISQSILVSGESGAGKTESTKMLMRYLAHVGGRAGGKAATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPTEEIEKYKLGNPRTFHYLNQSNCCELDGVDDSKEYLSTRKAMDVVGISTTEQDAIFRVVAAVLHLGNVEFAKGKDADSSEPKDDKARFHLKMAAELFMCDEKALEDSMCTRVIVTRDETITKCLDPDSASLSRDALAKIVYSRLFDWIVDKINNSIGQDPHSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGVIALLDEACMFPRSTHDTFAQKLYQTFKDHKRFSKPKLSRTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCPFVSGLFPPLPEETSKSSKFSSIGTRFKQQLQSLLETLNATEPHYIRCVKPNNLLKPAIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIGRFTILAPDVLKGSSNEATACKRLLEKVNLKGYQIGKTKVFLRAGQMAELDACRTEVLGRSAIVIQRKVRSYFGRKNFILLRLAAIQIQALCRGQVARQHYEDIRKEAASIKIQKYCRMHFARCCYKRLCCSAVAIQAGIHGMIARKELEFRRQTRAAIIIQSRCRQYLARMHYLRIKKAAITTQCAWRGRVARKELRKLKMLKKMFKEKLQLSKKKDNNNIITKVVGGGGKVRTALQPMPENRMTMDELEKRF | 1164 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3543262 | 3561919 | - | CePI673135_05g004350.1 | Cec05g0435 | 202238 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g0435 | 1164 | Gene3D | - | 485 | 543 | - | - | |
| Cec05g0435 | 1164 | Gene3D | Kinesin motor domain | 294 | 895 | IPR036961 | - | |
| Cec05g0435 | 1164 | FunFam | Myosin 2 | 545 | 662 | - | - | |
| Cec05g0435 | 1164 | Pfam | Myosin N-terminal SH3-like domain | 238 | 281 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec05g0435 | 1164 | ProSiteProfiles | IQ motif profile. | 1016 | 1045 | - | - | |
| Cec05g0435 | 1164 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 545 | 834 | - | - | |
| Cec05g0435 | 1164 | ProSiteProfiles | IQ motif profile. | 1087 | 1115 | - | - | |
| Cec05g0435 | 1164 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Cec05g0435 | 1164 | FunFam | Class V myosin | 672 | 814 | - | - | |
| Cec05g0435 | 1164 | Gene3D | - | 672 | 856 | - | - | |
| Cec05g0435 | 1164 | Pfam | IQ calmodulin-binding motif | 970 | 988 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | Pfam | IQ calmodulin-binding motif | 994 | 1011 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | Pfam | IQ calmodulin-binding motif | 1065 | 1084 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | Pfam | IQ calmodulin-binding motif | 1018 | 1037 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | Pfam | IQ calmodulin-binding motif | 1089 | 1108 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | Gene3D | - | 900 | 963 | - | - | |
| Cec05g0435 | 1164 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Cec05g0435 | 1164 | ProSiteProfiles | IQ motif profile. | 991 | 1020 | - | - | |
| Cec05g0435 | 1164 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 262 | 1019 | IPR027417 | - | |
| Cec05g0435 | 1164 | SMART | MYSc_2a | 285 | 966 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec05g0435 | 1164 | CDD | MYSc_Myo11 | 305 | 953 | IPR036018 | - | |
| Cec05g0435 | 1164 | ProSiteProfiles | IQ motif profile. | 1042 | 1068 | - | - | |
| Cec05g0435 | 1164 | FunFam | unconventional myosin-Va | 1066 | 1114 | - | - | |
| Cec05g0435 | 1164 | ProSiteProfiles | IQ motif profile. | 1064 | 1093 | - | - | |
| Cec05g0435 | 1164 | SMART | iq_5 | 1038 | 1060 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | SMART | iq_5 | 1086 | 1108 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | SMART | iq_5 | 1015 | 1037 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | SMART | iq_5 | 990 | 1012 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | SMART | iq_5 | 1063 | 1085 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | SMART | iq_5 | 967 | 989 | IPR000048 | GO:0005515(InterPro) | |
| Cec05g0435 | 1164 | Gene3D | - | 1066 | 1115 | - | - | |
| Cec05g0435 | 1164 | Gene3D | - | 968 | 1017 | - | - | |
| Cec05g0435 | 1164 | Gene3D | - | 1018 | 1065 | - | - | |
| Cec05g0435 | 1164 | ProSiteProfiles | Myosin motor domain profile. | 291 | 965 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec05g0435 | 1164 | PANTHER | MYOSIN | 1063 | 1121 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cec05g0435 | 1164 | FunFam | Myosin heavy chain | 485 | 540 | - | - | |
| Cec05g0435 | 1164 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1023 | 1115 | IPR027417 | - | |
| Cec05g0435 | 1164 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 237 | 286 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec05g0435 | 1164 | FunFam | Myosin XI D | 968 | 1017 | - | - | |
| Cec05g0435 | 1164 | PRINTS | Myosin heavy chain signature | 378 | 403 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec05g0435 | 1164 | PRINTS | Myosin heavy chain signature | 662 | 690 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec05g0435 | 1164 | PRINTS | Myosin heavy chain signature | 715 | 743 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec05g0435 | 1164 | PRINTS | Myosin heavy chain signature | 321 | 340 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec05g0435 | 1164 | PRINTS | Myosin heavy chain signature | 429 | 456 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cec05g0435 | 1164 | Pfam | Myosin head (motor domain) | 293 | 953 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec05g0435 | Cec-Chr5:3543262 | Cec06g0135 | Cec-Chr6:1338131 | 0.00E+00 | dispersed | |
| Cec01g0509 | Cec-Chr1:5160706 | Cec05g0435 | Cec-Chr5:3543262 | 6.50E-12 | transposed | |
| Cec06g2038 | Cec-Chr6:33452901 | Cec05g0435 | Cec-Chr5:3543262 | 1.50E-11 | transposed | |
| Cec11g1894 | Cec-Chr11:33162329 | Cec05g0435 | Cec-Chr5:3543262 | 1.40E-151 | transposed | |
| Cec05g0435 | Cec-Chr5:3543262 | Cec06g0772 | Cec-Chr6:9033759 | 3.90E-12 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g0435 | K10357 | - | csv:101221506 | 1699.1 |