Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0473 ATGATAAATTGTATTCGCTCAGGGGATCAGTTAAGAGTAGAGGAAATGATTCATTCATCAGATTCTCTGGCGACTCGAGATTATTCAGCTAGTGGTTTTTCATCCCGAACTGGCGAGGTGGAACAAAAGGTGGATAATGGCAACATTGAAGAGGCCGAATCATCTCTTCGTGAGAGTGGCTATTTGAATTATGAGGAAGCACGTGCTTTACTTGGAAGGCTGGAGTATCAAAAGGGTAACATAGAAGCTGCTCTTCATGTATTTGAAGGAATAGATATTGCTGCTGTAATTTCCAGGATAAAAGCTTCCATTTCAACGAGATACGAACAAAATAGGCGCCAATCACAAAGCGATGTTGTGCCTACTATGTCGATGCATGCAATTAGTTTACTTCTTGAAGCTATTTTTCTGAAAGCAAAATCATTACAGGGTTTAGGAAGGTTTGTAGAGGCGGCAAAATCATGCAAACTAATTTTAGACACTGTTGAATCTTCATTCCCAGAAGGCTTAACGGAAAACTTTGCTAATGATTGTAAATTACAAGAGACATTAACGAAGGCTGTTGACTTACTTCCAGAATTGTGGAAATCTGCGGGTTCTCCAGAAGAATCTATCTTGTCATATAGGCGTGCCCTTCTCTACCAATGGAATTTGGGAATGGAAACCAGAGCAAAGATAGAAAAAGAGTTTGCAATATTCCTTCTCTATAGTGGTTGTAATGCAAGTCCTCCAAATCTTCGTTCACAGATGGAAAGCTCATTTGTGCCAAGAAATAATATGGAAGAGGCCATTCTTCTGTTAATGGATCTGATGAGAAAATTTATACTTGGATTGATTGTATGGGACCCGTCAATAATAGAGCATCTCTCGTTTGCACTGTCTATTTCAGGGGAATTTGGAGCTCTAGCTAATGAGGTTGAACAATTGCCTCCTGGAATTATAGCAAGAAAAGAAAAATACTGTATCCTAGCACTTTGTTACTATGGGGAAGGTAAAGGCTTAGTTGCATTGAATCTTTTGAAGAACTTCTTGAATAATATAGAGAACGTTGACTGCTTACTGGAATTGTTGCTGGCTTCAAAGCTCTGTGGAGAAAATTTGGTTTGTCTTGATGAGGGAGTGACATACACATTGAGAGTGCTGTCAGAGCTGCATGGTAAATGCCTCCAGATGGCTTCTGTTGCTAATTGCTTACTTGGTGTGTTATTGTCAGCTATGTCCAAATTTGTTGCTTCAGATTCTCAGAAAACTTTGAAGCAGTCTGAAGCACTCAAGGCGCTACAAACTGCTGAGCAACTGATGAAACAAAGAGATCCATTCATTGTTTACCATCTTTGTCTTGAATATGCTGAACAGAGGAAGCTGGATTTTGCTCTATACTATGCAAAACAGCTAGTGAAACTTGAGACCGGCTCTAGTATGAAGTCTTACATACTCTTGGCTAGAATATTGTCTGCCCAGAAACGGTTTGTGGATGCGGAGACTGTTCTCAATGCTGCTCTTGAGCAGACAGGGAAGTGGGAACAGGGGGAACTCTTACGAACTAAAGCTAAGCTCCAGATTGCCCAGGGCCAGCTAAAGAACGGTATAGAAACATACAGTCATCTTCTTGCTATAATTCAAGTTCAGACCAAAAGTAGTGGAAAGATGCTTCCAAAGGATATAAGAAAATCTGACAGAAGTCTGGAAGTAGATACATGGCATGACTTAGCCAATATTTACACAAGCTTGTCTCAATGGCGGGATGCTGAGATCTGTCTGTCAAAATTGGAGGCAATCAATCCGTATTCTGCTTCCAAATGGCATTCCACAGGTTTGCTCTACGAGTCGAAGGGTCTTCCACGAGATGCTTTGCAAGCATACAACAAAGCATTGGACATTGATCCTGGCCATGTTCCCAGCTTGATATCAACTGCCTGTCTTCTCCAACAGCTGGGCGGCAGTCAGGCATTTCCTGTGGTGAGAAGCTTGCTAACAGATGCCCTTCGACTAGATCGAGCAAATCCATTGACATGGTACAATCTCGGGCTGCTATATAAAGCTGACGCTGGGGCATCGGCACTGGAGGTTGCTGAATGCTTTGAAGCTGCAACTCTGCTTGAAGAGTCGGCACCAGTTGAACCTTTCAGATGA 2133 41.91 MINCIRSGDQLRVEEMIHSSDSLATRDYSASGFSSRTGEVEQKVDNGNIEEAESSLRESGYLNYEEARALLGRLEYQKGNIEAALHVFEGIDIAAVISRIKASISTRYEQNRRQSQSDVVPTMSMHAISLLLEAIFLKAKSLQGLGRFVEAAKSCKLILDTVESSFPEGLTENFANDCKLQETLTKAVDLLPELWKSAGSPEESILSYRRALLYQWNLGMETRAKIEKEFAIFLLYSGCNASPPNLRSQMESSFVPRNNMEEAILLLMDLMRKFILGLIVWDPSIIEHLSFALSISGEFGALANEVEQLPPGIIARKEKYCILALCYYGEGKGLVALNLLKNFLNNIENVDCLLELLLASKLCGENLVCLDEGVTYTLRVLSELHGKCLQMASVANCLLGVLLSAMSKFVASDSQKTLKQSEALKALQTAEQLMKQRDPFIVYHLCLEYAEQRKLDFALYYAKQLVKLETGSSMKSYILLARILSAQKRFVDAETVLNAALEQTGKWEQGELLRTKAKLQIAQGQLKNGIETYSHLLAIIQVQTKSSGKMLPKDIRKSDRSLEVDTWHDLANIYTSLSQWRDAEICLSKLEAINPYSASKWHSTGLLYESKGLPRDALQAYNKALDIDPGHVPSLISTACLLQQLGGSQAFPVVRSLLTDALRLDRANPLTWYNLGLLYKADAGASALEVAECFEAATLLEESAPVEPFR 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3786298 3789843 - CePI673135_05g004730.1 Cec05g0473 202276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0473 710 Gene3D Tetratricopeptide repeat domain 36 553 IPR011990 GO:0005515(InterPro)
Cec05g0473 710 PANTHER PROTEIN NPG1 2 710 IPR043376 -
Cec05g0473 710 SUPERFAMILY TPR-like 511 680 IPR011990 GO:0005515(InterPro)
Cec05g0473 710 SMART tpr_5 474 507 IPR019734 GO:0005515(InterPro)
Cec05g0473 710 SMART tpr_5 132 165 IPR019734 GO:0005515(InterPro)
Cec05g0473 710 SMART tpr_5 510 543 IPR019734 GO:0005515(InterPro)
Cec05g0473 710 SMART tpr_5 598 631 IPR019734 GO:0005515(InterPro)
Cec05g0473 710 SMART tpr_5 564 597 IPR019734 GO:0005515(InterPro)
Cec05g0473 710 Gene3D Tetratricopeptide repeat domain 554 705 IPR011990 GO:0005515(InterPro)
Cec05g0473 710 ProSiteProfiles TPR repeat profile. 598 631 IPR019734 GO:0005515(InterPro)
Cec05g0473 710 Pfam Tetratricopeptide repeat 605 630 IPR019734 GO:0005515(InterPro)
Cec05g0473 710 SUPERFAMILY TPR-like 420 538 IPR011990 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0473 Cec-Chr5:3786298 Cec11g1716 Cec-Chr11:31412841 1.30E-162 dispersed
Cec05g0473 Cec-Chr5:3786298 Cec07g0156 Cec-Chr7:1670563 5.70E-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0473 K21843 - csv:101206105 1302.35