Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0521 ATGTTTGACCCATTAATTAGTGCTTCCCATCTCTGGGTTTATTCTTCTTTCTTTGCTCTTCGATTCCGTCTACTAGTGGAAGAAGTGCTGCTAAGGGTGGGATTGTCCGGGGTTGATCATCATCACCCGGCTGCGATCAACAACTCTCCCATCTTCAAACAAAGCGATGAAAACAGCGGCGGCAGCAGAGACGACGACGACGACGACAACAACCGCGATGAGCCTAAAGAAGGCGCGGTGGAAGCCGGAACACGGAGGCCAAGAGGCCGTCCACCTGGATCTAAAAACAAACCCAAACCCCCAATCTTCGTCACACGTGACAGTCCCAACGCCCTTCGGAGCTACGTCCTAGAGGTAGCTGCCGGATCCGACGTGGCCGATTCCATCGCTCAATTCGCCCGTAAACGCCAGCGTGGCGTCTGCGTCCTCAGTGCAACCGGCTTAGTCGCTAACGTCACCTTACGTCAGCCCGCTGCTCCCGGTTCCGTAATGCCACTCCAAGGAAGGTTTGAGATTCTATCTTTAACCGGCGCTTTTTTACCCGGTCCGGCCCCACCTGGCTCTACTGGCCTCACCGTTTACTTGTCCGGCGGTCAGGGCCAGGTCGTCGGTGGGAGCGTCGTTGGCTCGCTTGTGGCTGCCGGACCCATTATGGTAATTGCAGCCACTTTTGCTAACGCCACTTATGAAAGGTTGCCTCTTGAAGATCCCGACGACCATGAAGTTGGAAGTGGCTCCGCCTCACACGGCGGTCCTAGAAGTCCACCGCCCGAAATTAGAGCCACTGGAGGAGGGCAGATGCCGCCTGGGATGCCGGAACCCACTTTGCCGTTGTATAATTTACTGCCGGATATGATTCCCAACGGTGTTCAGCTTGGTCACGACGGGTATGCTTATGTCCGGCCGCCGTATTGA 915 55.74 MFDPLISASHLWVYSSFFALRFRLLVEEVLLRVGLSGVDHHHPAAINNSPIFKQSDENSGGSRDDDDDDNNRDEPKEGAVEAGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSYVLEVAAGSDVADSIAQFARKRQRGVCVLSATGLVANVTLRQPAAPGSVMPLQGRFEILSLTGAFLPGPAPPGSTGLTVYLSGGQGQVVGGSVVGSLVAAGPIMVIAATFANATYERLPLEDPDDHEVGSGSASHGGPRSPPPEIRATGGGQMPPGMPEPTLPLYNLLPDMIPNGVQLGHDGYAYVRPPY 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4157903 4159010 + CePI673135_05g005210.1 Cec05g0521 202324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0521 304 MobiDBLite consensus disorder prediction 235 274 - -
Cec05g0521 304 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 225 IPR005175 -
Cec05g0521 304 ProSiteProfiles PPC domain profile profile. 109 250 IPR005175 -
Cec05g0521 304 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 59 297 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec05g0521 304 Gene3D - 112 241 - -
Cec05g0521 304 FunFam AT-hook motif nuclear-localized protein 112 240 - -
Cec05g0521 304 CDD DUF296 113 195 IPR005175 -
Cec05g0521 304 MobiDBLite consensus disorder prediction 44 106 - -
Cec05g0521 304 SUPERFAMILY AF0104/ALDC/Ptd012-like 110 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0521 Cec-Chr5:4157903 Cec07g0387 Cec-Chr7:3952144 2.00E-64 dispersed
Cec02g1771 Cec-Chr2:35542995 Cec05g0521 Cec-Chr5:4157903 7.50E-77 wgd
Cec05g0521 Cec-Chr5:4157903 Cec06g0693 Cec-Chr6:7862803 4.40E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0521 - - - 0.0