Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0525 ATGAAACTTTCTCGTCTAAATTCCCTCCGGCGAGTTCAGTCCGGCGAGCTTATCATGAAGCTCCCCGACGACCTCGACGATTCCAAAAGACCCCAATTCCCTCTCGATTCCACCTCTTACAAAATCATCGACGAAATTGGGATCGGCGTCAGCGCCGTCGTGTACAAAGCTATCTGCATTCCGATGAATTCTGCAGTTGTGGCCATCAAAGCCATCGATCTCGATCGATCACGAGCCGATTTCGATGACATTCGAAGAGAAGCCAAAATTCTCTCACTTCTCTCTCACCCCAATATTCTAAATGCTCACTGTTCTTTCACCGTCGATCGTCGTCTTTGGGTCGTAATGCCGTTCATGTCAGCTGGATCTTTACAGTCCATTATTACGTCGTCGTTTCCCGATGGCTTGCCGGAGCCCTGTATCGCCGTTGTTCTCCGGGAAATTCTACACGCTCTGTCTTACCTCCACGACCAAGGCCATCTCCACCGTGATATTAAAGCCGGCAACATTCTGATGGACTCAAATGGGTCTGTCAAGCTGGCTGATTTTGGAGTTTCGGCGTCGATTTTTGAGGCGAATTCAAAACAGGGGGTGTCAATTTCTCCACTATCGACATCGATGATGCTGAAGGAAGTCGCCGGAACGCCGTACTGGATGGCGCCGGAGGTGATTCACTCCCACAATGGGTATAGTTTGAAAGCGGATATATGGTCATTTGGAATCACGGCGTTGGAATTAGCCCATGGACGACCTCCTCTGTCTCATCTCCCTCCTTCCAAATCCCTGCTTCTGAAAATCACGCGGAGGTTTCGATTCTCCGATTACGAGAACCACCGCAACTGCAAGAACAAGAACAAATTCTCAAAAGGGTTTAAGGAATTGGTAGCCTCTTGCCTCGATCAAGAGCCATCGAGAAGACCCTGCGCTGAGAAATTGCTCAAACATCCGTTCTTCAAAAACTGCAAGGGACCTGATCTTCTCGTAAAAACAATATTACAAGGTCTACCCAGCGTTGAGGAGCGATTCAAATTGGGGAAATTACAGCGATTGCCGTCGATGAAAACTGAGGAAGAGGAGGAGGAAGAAGAATTAGAGAAGGAGATTATAAAACAGAGGAGGATAAGTGGGTGGAATTTCAATGAGGATGGACTAGAGCTGGACCCTGTTTTTCCAGGGGAAAACTGCGAGGAAGAATGCTCGATCATAGAGGAGAAGGGTTCGGGGGATTTGAGCGAGTGGTGTTCTGGGTTGTCGGATCTAAGTTCGCCGGTGGGGAACGAGAGGGGCGGCGGCGGTGGCGGAGGGGAGGAGGAGGTTGTTGACAGGGAATCGATAGTGGGGGGATTGGTGGTGCTGAAAAGGAGCTTAGACGAGCAGAGGAGGGCGGTGGGGAGTTTGATAGAGCTGATAGAAGGGGAGAAAGGGGGAGAGATGAGCAGAGAGGAACAGATGGGGAGATTGATGGAGAAGATGACGAAGGAGTTGGAGAATGAGAGGAAGAGGAACTTTGAATTGGAAATGGAGTTGGAATTTCTTAGGCTTCAGATTTCTGCTGCTTATAATAATAATAATAATAATAATAATAATAATAATAATACTAATAATAATAATAATGGTGGTGGTGGTGCTTCAACCGCCATTAATAACTGA 1650 47.82 MKLSRLNSLRRVQSGELIMKLPDDLDDSKRPQFPLDSTSYKIIDEIGIGVSAVVYKAICIPMNSAVVAIKAIDLDRSRADFDDIRREAKILSLLSHPNILNAHCSFTVDRRLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAVVLREILHALSYLHDQGHLHRDIKAGNILMDSNGSVKLADFGVSASIFEANSKQGVSISPLSTSMMLKEVAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLKITRRFRFSDYENHRNCKNKNKFSKGFKELVASCLDQEPSRRPCAEKLLKHPFFKNCKGPDLLVKTILQGLPSVEERFKLGKLQRLPSMKTEEEEEEEELEKEIIKQRRISGWNFNEDGLELDPVFPGENCEEECSIIEEKGSGDLSEWCSGLSDLSSPVGNERGGGGGGGEEEVVDRESIVGGLVVLKRSLDEQRRAVGSLIELIEGEKGGEMSREEQMGRLMEKMTKELENERKRNFELEMELEFLRLQISAAYNNNNNNNNNNNNTNNNNNGGGGASTAINN 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4217294 4218943 - CePI673135_05g005250.1 Cec05g0525 202328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0525 549 SMART serkin_6 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g0525 549 SUPERFAMILY Protein kinase-like (PK-like) 39 335 IPR011009 -
Cec05g0525 549 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524(InterPro)
Cec05g0525 549 Coils Coil 481 515 - -
Cec05g0525 549 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 32 532 IPR047173 GO:0043539(InterPro)|GO:1902456(PANTHER)
Cec05g0525 549 MobiDBLite consensus disorder prediction 522 549 - -
Cec05g0525 549 Coils Coil 347 374 - -
Cec05g0525 549 Pfam Protein kinase domain 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g0525 549 Gene3D Transferase(Phosphotransferase) domain 1 122 372 - -
Cec05g0525 549 FunFam Serine/threonine-protein kinase BLUS1 29 118 - -
Cec05g0525 549 Gene3D Phosphorylase Kinase; domain 1 29 118 - -
Cec05g0525 549 ProSiteProfiles Protein kinase domain profile. 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0525 Cec-Chr5:4217294 Cec11g1834 Cec-Chr11:32501675 2.60E-54 dispersed
Cec09g2018 Cec-Chr9:37193330 Cec05g0525 Cec-Chr5:4217294 2.60E-93 transposed
Cec10g0089 Cec-Chr10:870493 Cec05g0525 Cec-Chr5:4217294 7.00E-87 transposed
Cec10g1294 Cec-Chr10:27079926 Cec05g0525 Cec-Chr5:4217294 7.90E-86 transposed
Cec05g0525 Cec-Chr5:4217294 Cec06g0690 Cec-Chr6:7806779 3.90E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71980 PF00069 Pkinase 3.70E-59 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0525 K08835 - csv:101215648 891.723