Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g0565 | ATGCCAGTACGGCAAATGAAAGAGAGCTCCGAGCAGCACCTTGTAATCAAAACCCACTTACAGAACTCTGTTCAAAAACCTCCAAAATCAACCCAAAATGGAAAAGGCCCCCCGAATCTGGAACACCAAAACATCAAATCTCGAAACCCATCTTCTCCTCCGAGTAAAAGCAGGGGCCGGAGAAGGAGCAGAGGCGGCCGGAAATCCGATCAAGGAGAAGTGTTTATGAGGCCCAGTTCTCGACCCTGCACGGTTGCACGTAAACCCGATGAACCGGAGTTTAACGCCGGAGCTCTGGTGGCAAGTACTAATCCAAATGGTGGAAACATTAGTGGGATGCAAATGGGTTTTCGAAATTCAAGCAAGTCTTTGAGTTTTGCTCCAAGGCCTGGATTCGGACAAGTTGGAACGAAGTGTATTGTTAAAGCAAACCATTTCTTTGCAGAGTTACCAGACAAAGATTTGAATCAATATGATGTTACAATTACTCCTGAAGTGGCATCAAGAACTGTGAACAGAGCCATCATGGCTGAATTGGTGAGATTATACAGAGAATCTGATCTGGGAAAAAGATTACCGGCTTATGATGGCAGAAAGAGTCTGTATACAGCTGGTGAGCTTCCTTTTGTTTGGAAAGAGTTTGATATCAAGCTTGTGGATGAAGAAGATGGAGTCAGTGGTCCCAAGAGGGAGAGGGAGTATAAAGTAGTTATTAAGTTCGTTGCACGTGCAAATTTACACCATTTGGGTCAGTTTCTGTCGGGTAAGCGTGCTGATGCTCCACAAGAAGCTCTTCAAATACTGGACATTGTATTGAGAGAGCTGTCATCTAAAAGGTACTGTCCTATAGGGAGATCCTTCTTTTCTCCTGATATTAGATCACCTCAGCGGCTCGGTGATGGGCTAGAATCATGGTGTGGTTTTTACCAGAGTATTAGACCTACTCAAATGGGACTGTCTCTGAACATTGATATGGCTTCAGCTGCATTCATTGAGCCTCTCCCTGTCCTTGAGTTTGTTGCTCAGCTTCTAGGGAAAGATGTTTTGTCACGGCCATTATCTGACTCTGATAGAGTAAAGATTAAAAAGGCTCTGAGAGGGGTGAAAGTTGAAGTAACACACCGTGGAAATGTAAGGCGGAAATATCGAGTTTCGGGTTTGACATCACAGCCTACAAGAGAATTAGTATTTCCTGTTGATGACAACTCAACCATGAAGTCAGTTGTTGAATACTTCCAGGAGATGTATGGCTTCACCATTCAGCATGCACATCTCCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGCAAATTATTTGCCAATGGAGGCCTGCAAAATTGTAGGGGGCCAAAGATATACAAAGAGATTGAATGAGAAGCAAATAACTGCACTTCTAAAAGTCACATGTCAAAGACCTAGGGATCGGGAAAATGACATTTTGCAGACTGTCCAACATAATGCTTATGATAATGATCCTTATGCTAAGGAGTTTGGGATTAAAATTAGTGAAAAGCTGGCTTCCGTTGAAGCTAGAATTCTTCCTCCTCCATGGCTGAAATATCATGATACCGGAAAAGAGAAGGATTGCTTGCCTCAAGTGGGTCAATGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAACCGGTGGGCATGTATCAACTTCTCTAGGAGTGTGCAAGAGAGTGTTGCTCGTGGGTTTTGTTCTGAACTTGCTCAAATGTGTCAAGTGTCTGGAATGGAATTCAATCCAGAACCAGTTATTCCGATATACAACGCAAGGCCAGAACAGGTAGAGAAAGCTTTGAAGCATGTTTATCATGCTTCCATGAACAAGACTAAAGGGAAAGAGTTAGAACTATTATTGGCTATTTTACCTGACAATAACGGGTCGCTTTACGGTGATCTTAAGCGAATTTGTGAAACTGATCTTGGTTTAATATCACAATGCTGTCTTACAAAACACGTGTTCAAGATAAGTAAGCAGTACCTTGCTAATGTGTCACTGAAGATCAATGTCAAGATGGGTGGTAGAAACACTGTTCTTCTAGATGCTATTAGCTGCAGGATACCGCTTGTGAGTGACATACCAACAATAATTTTCGGTGCAGATGTGACCCATCCAGAGAACGGCGAAGATTCCAGCCCTTCAATAGCTGCTGTAGTAGCCTCTCAGGATTGGCCTGAAGTGACAAAGTATGCTGGACTAGTATGTGCTCAAGCTCATAGACAAGAACTTATACAAGACTTGTACAAAACTTGGCAGGATCCTGTCCGTGGCACTGTCAGCGGTGGCATGATCAGGGATCTTCTGGTTTCATTTAGGAAAGCTACAGGGCAGAAGCCTCTCAGGATAATATTTTACAGGGATGGGGTGAGCGAAGGACAATTCTATCAAGTATTACTTTATGAGTTGGATGCCATCAGGAAGGCATGTGCATCTTTAGAACCGAATTACCAACCACCCGTGACGTTCATTGTCGTGCAAAAGCGACACCACACCCGATTGTTCGCCAACAACTATAGAGATAGAAGTAGCACAGACAAGAGTGGCAACATTTTGCCTGGCACCGTAGTTGACTCCAAAATATGCCACCCAACAGAATTTGATTTCTACCTCTGTAGCCATGCTGGAATTCAGGGGACGAGTCGCCCAGCTCACTACCATGTTCTTTGGGATGAAAACAATTTTACTGCAGATGGAATTCAGTCATTAACGAACAATCTTTGCTACACGTATGCAAGGTGTACACGTTCGGTTTCTGTCGTCCCTCCAGCATACTATGCACATTTAGCTGCATTCCGAGCTCGATTCTACATGGAACCGGAGATGCAGGAGAATGGCTCAGCTGGTCGTTCTGCCAAGAGTACACGCACTACCGGAGAGTCTGGGGTTCGTCCTTTGCCAGCTCTAAAGGAAAATGTGAAGAGATCGAGATTTCAAGAACTTAACATTGTCAAGGATTTTGCCCTCAAGGAACAACATGGAACTTGTTCAATTGCTTGGTTATTGAGGCGTGGTCATGGAAAACTAACTTGGCTCTAA | 3051 | 43.66 | MPVRQMKESSEQHLVIKTHLQNSVQKPPKSTQNGKGPPNLEHQNIKSRNPSSPPSKSRGRRRSRGGRKSDQGEVFMRPSSRPCTVARKPDEPEFNAGALVASTNPNGGNISGMQMGFRNSSKSLSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASRTVNRAIMAELVRLYRESDLGKRLPAYDGRKSLYTAGELPFVWKEFDIKLVDEEDGVSGPKREREYKVVIKFVARANLHHLGQFLSGKRADAPQEALQILDIVLRELSSKRYCPIGRSFFSPDIRSPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVAQLLGKDVLSRPLSDSDRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHAHLPCLQVGNQKKANYLPMEACKIVGGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTVQHNAYDNDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQESVARGFCSELAQMCQVSGMEFNPEPVIPIYNARPEQVEKALKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSAGRSAKSTRTTGESGVRPLPALKENVKRSRFQELNIVKDFALKEQHGTCSIAWLLRRGHGKLTWL | 1016 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4576576 | 4583925 | + | CePI673135_05g005650.1 | Cec05g0565 | 202368 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g0565 | 1016 | CDD | PAZ_argonaute_like | 333 | 447 | - | - | |
Cec05g0565 | 1016 | Pfam | Piwi domain | 623 | 942 | IPR003165 | GO:0003676(InterPro) | |
Cec05g0565 | 1016 | ProSiteProfiles | PAZ domain profile. | 335 | 448 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cec05g0565 | 1016 | Gene3D | paz domain | 327 | 452 | - | - | |
Cec05g0565 | 1016 | SUPERFAMILY | PAZ domain | 328 | 488 | IPR036085 | GO:0005515(InterPro) | |
Cec05g0565 | 1016 | SMART | PAZ_2_a_3 | 338 | 470 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cec05g0565 | 1016 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 129 | 970 | - | GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER) | |
Cec05g0565 | 1016 | Pfam | Argonaute linker 1 domain | 282 | 332 | IPR014811 | - | |
Cec05g0565 | 1016 | SUPERFAMILY | Ribonuclease H-like | 610 | 943 | IPR012337 | - | |
Cec05g0565 | 1016 | Gene3D | - | 691 | 983 | IPR036397 | GO:0003676(InterPro) | |
Cec05g0565 | 1016 | Pfam | PAZ domain | 360 | 464 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cec05g0565 | 1016 | FunFam | Argonaute 10 | 512 | 685 | - | - | |
Cec05g0565 | 1016 | ProSiteProfiles | Piwi domain profile. | 622 | 943 | IPR003165 | GO:0003676(InterPro) | |
Cec05g0565 | 1016 | MobiDBLite | consensus disorder prediction | 1 | 90 | - | - | |
Cec05g0565 | 1016 | Gene3D | - | 512 | 685 | - | - | |
Cec05g0565 | 1016 | MobiDBLite | consensus disorder prediction | 15 | 54 | - | - | |
Cec05g0565 | 1016 | CDD | Piwi_ago-like | 492 | 942 | IPR045246 | - | |
Cec05g0565 | 1016 | FunFam | Protein argonaute-2 | 327 | 453 | - | - | |
Cec05g0565 | 1016 | FunFam | protein argonaute 10-like | 691 | 983 | - | - | |
Cec05g0565 | 1016 | Pfam | Argonaute linker 2 domain | 474 | 520 | IPR032472 | - | |
Cec05g0565 | 1016 | SMART | DUF1785_2 | 281 | 333 | IPR014811 | - | |
Cec05g0565 | 1016 | Pfam | Mid domain of argonaute | 531 | 608 | IPR032473 | - | |
Cec05g0565 | 1016 | Pfam | N-terminal domain of argonaute | 138 | 272 | IPR032474 | - | |
Cec05g0565 | 1016 | MobiDBLite | consensus disorder prediction | 947 | 968 | - | - | |
Cec05g0565 | 1016 | SMART | Piwi_a_2 | 622 | 943 | IPR003165 | GO:0003676(InterPro) | |
Cec05g0565 | 1016 | MobiDBLite | consensus disorder prediction | 951 | 965 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g1798 | Cec-Chr1:32412143 | Cec05g0565 | Cec-Chr5:4576576 | 0.00E+00 | dispersed | |
Cec05g0565 | Cec-Chr5:4576576 | Cec06g1211 | Cec-Chr6:24780050 | 0.00E+00 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g0565 | K11593 | - | csv:101221352 | 1929.84 |