Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0565 ATGCCAGTACGGCAAATGAAAGAGAGCTCCGAGCAGCACCTTGTAATCAAAACCCACTTACAGAACTCTGTTCAAAAACCTCCAAAATCAACCCAAAATGGAAAAGGCCCCCCGAATCTGGAACACCAAAACATCAAATCTCGAAACCCATCTTCTCCTCCGAGTAAAAGCAGGGGCCGGAGAAGGAGCAGAGGCGGCCGGAAATCCGATCAAGGAGAAGTGTTTATGAGGCCCAGTTCTCGACCCTGCACGGTTGCACGTAAACCCGATGAACCGGAGTTTAACGCCGGAGCTCTGGTGGCAAGTACTAATCCAAATGGTGGAAACATTAGTGGGATGCAAATGGGTTTTCGAAATTCAAGCAAGTCTTTGAGTTTTGCTCCAAGGCCTGGATTCGGACAAGTTGGAACGAAGTGTATTGTTAAAGCAAACCATTTCTTTGCAGAGTTACCAGACAAAGATTTGAATCAATATGATGTTACAATTACTCCTGAAGTGGCATCAAGAACTGTGAACAGAGCCATCATGGCTGAATTGGTGAGATTATACAGAGAATCTGATCTGGGAAAAAGATTACCGGCTTATGATGGCAGAAAGAGTCTGTATACAGCTGGTGAGCTTCCTTTTGTTTGGAAAGAGTTTGATATCAAGCTTGTGGATGAAGAAGATGGAGTCAGTGGTCCCAAGAGGGAGAGGGAGTATAAAGTAGTTATTAAGTTCGTTGCACGTGCAAATTTACACCATTTGGGTCAGTTTCTGTCGGGTAAGCGTGCTGATGCTCCACAAGAAGCTCTTCAAATACTGGACATTGTATTGAGAGAGCTGTCATCTAAAAGGTACTGTCCTATAGGGAGATCCTTCTTTTCTCCTGATATTAGATCACCTCAGCGGCTCGGTGATGGGCTAGAATCATGGTGTGGTTTTTACCAGAGTATTAGACCTACTCAAATGGGACTGTCTCTGAACATTGATATGGCTTCAGCTGCATTCATTGAGCCTCTCCCTGTCCTTGAGTTTGTTGCTCAGCTTCTAGGGAAAGATGTTTTGTCACGGCCATTATCTGACTCTGATAGAGTAAAGATTAAAAAGGCTCTGAGAGGGGTGAAAGTTGAAGTAACACACCGTGGAAATGTAAGGCGGAAATATCGAGTTTCGGGTTTGACATCACAGCCTACAAGAGAATTAGTATTTCCTGTTGATGACAACTCAACCATGAAGTCAGTTGTTGAATACTTCCAGGAGATGTATGGCTTCACCATTCAGCATGCACATCTCCCTTGCCTTCAAGTAGGAAACCAGAAGAAGGCAAATTATTTGCCAATGGAGGCCTGCAAAATTGTAGGGGGCCAAAGATATACAAAGAGATTGAATGAGAAGCAAATAACTGCACTTCTAAAAGTCACATGTCAAAGACCTAGGGATCGGGAAAATGACATTTTGCAGACTGTCCAACATAATGCTTATGATAATGATCCTTATGCTAAGGAGTTTGGGATTAAAATTAGTGAAAAGCTGGCTTCCGTTGAAGCTAGAATTCTTCCTCCTCCATGGCTGAAATATCATGATACCGGAAAAGAGAAGGATTGCTTGCCTCAAGTGGGTCAATGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAACCGGTGGGCATGTATCAACTTCTCTAGGAGTGTGCAAGAGAGTGTTGCTCGTGGGTTTTGTTCTGAACTTGCTCAAATGTGTCAAGTGTCTGGAATGGAATTCAATCCAGAACCAGTTATTCCGATATACAACGCAAGGCCAGAACAGGTAGAGAAAGCTTTGAAGCATGTTTATCATGCTTCCATGAACAAGACTAAAGGGAAAGAGTTAGAACTATTATTGGCTATTTTACCTGACAATAACGGGTCGCTTTACGGTGATCTTAAGCGAATTTGTGAAACTGATCTTGGTTTAATATCACAATGCTGTCTTACAAAACACGTGTTCAAGATAAGTAAGCAGTACCTTGCTAATGTGTCACTGAAGATCAATGTCAAGATGGGTGGTAGAAACACTGTTCTTCTAGATGCTATTAGCTGCAGGATACCGCTTGTGAGTGACATACCAACAATAATTTTCGGTGCAGATGTGACCCATCCAGAGAACGGCGAAGATTCCAGCCCTTCAATAGCTGCTGTAGTAGCCTCTCAGGATTGGCCTGAAGTGACAAAGTATGCTGGACTAGTATGTGCTCAAGCTCATAGACAAGAACTTATACAAGACTTGTACAAAACTTGGCAGGATCCTGTCCGTGGCACTGTCAGCGGTGGCATGATCAGGGATCTTCTGGTTTCATTTAGGAAAGCTACAGGGCAGAAGCCTCTCAGGATAATATTTTACAGGGATGGGGTGAGCGAAGGACAATTCTATCAAGTATTACTTTATGAGTTGGATGCCATCAGGAAGGCATGTGCATCTTTAGAACCGAATTACCAACCACCCGTGACGTTCATTGTCGTGCAAAAGCGACACCACACCCGATTGTTCGCCAACAACTATAGAGATAGAAGTAGCACAGACAAGAGTGGCAACATTTTGCCTGGCACCGTAGTTGACTCCAAAATATGCCACCCAACAGAATTTGATTTCTACCTCTGTAGCCATGCTGGAATTCAGGGGACGAGTCGCCCAGCTCACTACCATGTTCTTTGGGATGAAAACAATTTTACTGCAGATGGAATTCAGTCATTAACGAACAATCTTTGCTACACGTATGCAAGGTGTACACGTTCGGTTTCTGTCGTCCCTCCAGCATACTATGCACATTTAGCTGCATTCCGAGCTCGATTCTACATGGAACCGGAGATGCAGGAGAATGGCTCAGCTGGTCGTTCTGCCAAGAGTACACGCACTACCGGAGAGTCTGGGGTTCGTCCTTTGCCAGCTCTAAAGGAAAATGTGAAGAGATCGAGATTTCAAGAACTTAACATTGTCAAGGATTTTGCCCTCAAGGAACAACATGGAACTTGTTCAATTGCTTGGTTATTGAGGCGTGGTCATGGAAAACTAACTTGGCTCTAA 3051 43.66 MPVRQMKESSEQHLVIKTHLQNSVQKPPKSTQNGKGPPNLEHQNIKSRNPSSPPSKSRGRRRSRGGRKSDQGEVFMRPSSRPCTVARKPDEPEFNAGALVASTNPNGGNISGMQMGFRNSSKSLSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVASRTVNRAIMAELVRLYRESDLGKRLPAYDGRKSLYTAGELPFVWKEFDIKLVDEEDGVSGPKREREYKVVIKFVARANLHHLGQFLSGKRADAPQEALQILDIVLRELSSKRYCPIGRSFFSPDIRSPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVAQLLGKDVLSRPLSDSDRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHAHLPCLQVGNQKKANYLPMEACKIVGGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTVQHNAYDNDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQESVARGFCSELAQMCQVSGMEFNPEPVIPIYNARPEQVEKALKHVYHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSAGRSAKSTRTTGESGVRPLPALKENVKRSRFQELNIVKDFALKEQHGTCSIAWLLRRGHGKLTWL 1016
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4576576 4583925 + CePI673135_05g005650.1 Cec05g0565 202368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0565 1016 CDD PAZ_argonaute_like 333 447 - -
Cec05g0565 1016 Pfam Piwi domain 623 942 IPR003165 GO:0003676(InterPro)
Cec05g0565 1016 ProSiteProfiles PAZ domain profile. 335 448 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cec05g0565 1016 Gene3D paz domain 327 452 - -
Cec05g0565 1016 SUPERFAMILY PAZ domain 328 488 IPR036085 GO:0005515(InterPro)
Cec05g0565 1016 SMART PAZ_2_a_3 338 470 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cec05g0565 1016 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 129 970 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Cec05g0565 1016 Pfam Argonaute linker 1 domain 282 332 IPR014811 -
Cec05g0565 1016 SUPERFAMILY Ribonuclease H-like 610 943 IPR012337 -
Cec05g0565 1016 Gene3D - 691 983 IPR036397 GO:0003676(InterPro)
Cec05g0565 1016 Pfam PAZ domain 360 464 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cec05g0565 1016 FunFam Argonaute 10 512 685 - -
Cec05g0565 1016 ProSiteProfiles Piwi domain profile. 622 943 IPR003165 GO:0003676(InterPro)
Cec05g0565 1016 MobiDBLite consensus disorder prediction 1 90 - -
Cec05g0565 1016 Gene3D - 512 685 - -
Cec05g0565 1016 MobiDBLite consensus disorder prediction 15 54 - -
Cec05g0565 1016 CDD Piwi_ago-like 492 942 IPR045246 -
Cec05g0565 1016 FunFam Protein argonaute-2 327 453 - -
Cec05g0565 1016 FunFam protein argonaute 10-like 691 983 - -
Cec05g0565 1016 Pfam Argonaute linker 2 domain 474 520 IPR032472 -
Cec05g0565 1016 SMART DUF1785_2 281 333 IPR014811 -
Cec05g0565 1016 Pfam Mid domain of argonaute 531 608 IPR032473 -
Cec05g0565 1016 Pfam N-terminal domain of argonaute 138 272 IPR032474 -
Cec05g0565 1016 MobiDBLite consensus disorder prediction 947 968 - -
Cec05g0565 1016 SMART Piwi_a_2 622 943 IPR003165 GO:0003676(InterPro)
Cec05g0565 1016 MobiDBLite consensus disorder prediction 951 965 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1798 Cec-Chr1:32412143 Cec05g0565 Cec-Chr5:4576576 0.00E+00 dispersed
Cec05g0565 Cec-Chr5:4576576 Cec06g1211 Cec-Chr6:24780050 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0565 K11593 - csv:101221352 1929.84