Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0577 ATGGGTAATGCTGATTTTGAATGCCCTCACAGAGTAGCCATTCCTCCAAAAAAGCCCTTCTTCCACTCCTTATCTTCCAATCTCAAAGAAACCTTCTTCCCCGATGACCCTTTCAAACAATTCAAAAACCAACCTTTGCCCACCCAAATCCTTCTCTGGCTTAAATACTTCATCCCCTTTCTTGATTGGGCTCCTCGTTACACTTTCGACTTCTTCAAAGCCGACCTCGTCGCTGGTATCACCATCGCCAGTTTGGCCGTCCCTCAGGGTATCAGCTATGCCAATCTCGCCAGTATCCCTCCCATCATCGGACTTTATTCCAGCTTCATCCCACCCTTGGTATACGCCATGTTCGGAAGCTCGAAAGATATAGCAGTGGGTACGGTGGCAGTAGCTTCCTTGCTTATGTCTGCCATGTTGGGGAAGGAAGTCAACCCGGTAGAGCATCCAAAGCAATACGTTCAATTGGTTTTCACTGCCACCTTCTTTGCAGGGGTTTTTCAGGCTTCTCTCGGGTTTCTCAGATTAGGGCTGATTGTGGACTTTTTGTCGCATGCAACAATAGTGGGCTTCATGGGTGGTGCAGCAACCGTGGTTTGTCTTCAGCAATTGAAAGGCATAACGGGATTGCTTCATTTTACGCATGAGACTGATATTGTATCCGTTATGCGCTCTCTTTTCTCTCAAATTCACAAGTGGAGATGGGAAAGTATTGTGTTGGGTTGCTGTTTTCTCTTCTTTCTCCTCCTCACTAGATACTTGAGCAAGAAGAAAGCAATCTTCTTTTGGATAAATGCATTGGCGCCTTTGACTTCGGTCATCTTGGGCAGTCTTCTCGTTTACTTAACCCATGCTGAAAAGCATGGAGTTCAAGTGATTGGGAATTTGAAGAAAGGGTTGAATCCCCCTTCTGTATCTGATTTAGTATTTGGATCCCCTCATCTCGCCGTTGCCATCAAAACAGGGATCATCATCGGAATCATTGGCCTCGCTGAAGGAGTTGCAGTGGGAAGAAGTTTTGCTGCTTTTAAGAACTACCACATTGATGGAAACAAGGAGATGATAGCATTTGGGATGATGAACATTGTTGGTTCTTGCACTTCTTGCTACCTTACTGCAGGACCATTTTCGAGGACTGCGGTGAATTTCAATGCAGGATGTAAAACTGCGGTCTCAAATATTGTCATGGCAATTGCTCTGATGATCACTCTGTTGTTTTTGACGCCATTTTTTCATTACACACCCCTGGTGGTGCTTTCCTCCATAATCATCACTGCTATGCTCGGCCTAATCAACTATGAAGAAGTCATCCACCTTTGGAAAATTGATAAATTTGACTTTGTCGTCTGCCTCGGTGCATATATCGGTGTCGTCTTTGGCAGCGTTGAAACGGGCTTGATCGTTGCGATTACACTCTCTTTGTTAAGGGTGCTTCTAATCATCGCGAGGCCAAGAACTTTAGTATTAGGCAACATTCCCAACTCGACAATTTACAGAAGCATCGATCAATACCCAACAGCCAAAAATGTGCCTGGAATTCTCATCCTCCAATTGGAGGCCCCAATCTATTTTGCCAACTCAAACTACCTGAGAGAAAGGCTTTCAAGGTGGATTACAGATGAAGAACAGAGGATAAAATCATCTGGAGAAACCAGCTTGCAGTATATAATTCTAGACATTTCCGGCGTAAGTAGCATTGACTCAAGTGGAATCAGCATGCTCGAAGACGTTAAGAAGAGTACTGAAAGAAAGGGTCTCAAACTTGTGCTTGCAAATCCAAGAAGTGAAGTGATAAAAAAGTTAAACGAAGCAAAGTTCATCGAGGCGATCGGACAGGAATGGATCTATCTTACAGTGGGAGAGGCTGTAACAGCTTGCAACTTCATGCTCCACACTTGCAAGCCAAATCCTGTTGCTGCTGAATTAGATTCACCTGTGTAG 1941 44.51 MGNADFECPHRVAIPPKKPFFHSLSSNLKETFFPDDPFKQFKNQPLPTQILLWLKYFIPFLDWAPRYTFDFFKADLVAGITIASLAVPQGISYANLASIPPIIGLYSSFIPPLVYAMFGSSKDIAVGTVAVASLLMSAMLGKEVNPVEHPKQYVQLVFTATFFAGVFQASLGFLRLGLIVDFLSHATIVGFMGGAATVVCLQQLKGITGLLHFTHETDIVSVMRSLFSQIHKWRWESIVLGCCFLFFLLLTRYLSKKKAIFFWINALAPLTSVILGSLLVYLTHAEKHGVQVIGNLKKGLNPPSVSDLVFGSPHLAVAIKTGIIIGIIGLAEGVAVGRSFAAFKNYHIDGNKEMIAFGMMNIVGSCTSCYLTAGPFSRTAVNFNAGCKTAVSNIVMAIALMITLLFLTPFFHYTPLVVLSSIIITAMLGLINYEEVIHLWKIDKFDFVVCLGAYIGVVFGSVETGLIVAITLSLLRVLLIIARPRTLVLGNIPNSTIYRSIDQYPTAKNVPGILILQLEAPIYFANSNYLRERLSRWITDEEQRIKSSGETSLQYIILDISGVSSIDSSGISMLEDVKKSTERKGLKLVLANPRSEVIKKLNEAKFIEAIGQEWIYLTVGEAVTACNFMLHTCKPNPVAAELDSPV 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4717700 4723171 + CePI673135_05g005770.1 Cec05g0577 202380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0577 646 FunFam Sulfate transporter 31 483 629 - -
Cec05g0577 646 CDD STAS_SulP_like_sulfate_transporter 504 619 - -
Cec05g0577 646 SUPERFAMILY SpoIIaa-like 506 626 IPR036513 -
Cec05g0577 646 Gene3D STAS domain 483 628 IPR036513 -
Cec05g0577 646 Pfam Sulfate permease family 72 451 IPR011547 GO:0016020(InterPro)
Cec05g0577 646 PANTHER SULFATE TRANSPORTER 27 626 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g0577 646 ProSiteProfiles STAS domain profile. 503 626 IPR002645 -
Cec05g0577 646 ProSitePatterns SLC26A transporters signature. 101 122 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cec05g0577 646 Pfam STAS domain 504 622 IPR002645 -
Cec05g0577 646 NCBIfam sulfate permease 59 622 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0577 Cec-Chr5:4717700 Cec06g1176 Cec-Chr6:23912638 1.50E-199 dispersed
Cec05g0577 Cec-Chr5:4717700 Cec09g0705 Cec-Chr9:6255367 5.00E-283 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0577 K17471 - csv:101203205 1184.09