Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g0578 | ATGAAAACTTTAAGCTCCCCTCTCTCAAAATCTCTCTTCCTCATCTCCATCCTCATCCTCCTCTCCCAACCTTCCCATCAAGCAACTCCGTCACCGACGCCATTTCTCCCAAACCCCAGACTTCTTAAGGCCTACTCCGCTCTCCAAGCTTGGAAACATGCCATCACCGCCGACCCGACCAACTTCACCTCCGATTGGTACGGCCCCAATGTCTGCAACTACTCCGGTGTCTTCTGCGCCCCCGCCCCCGACGACCCCGACATCCTCACCGTCGCCGGGATCGACCTAAACCACGCCAACGTCTCGGGCACCCTGCCCGACGACCTCGGCCTCCTCACCGACCTTGCTCTGTTCCACATCAACTCCAATCACTTCTGCGGCACTATCCCTAATTCCTTCCGGTGCCTCACTCTTCTCTTCGAGCTCGATATCAGCAACAATGACTTCTCCGGCGAATTCCCCTCTGTAATTCTCTCTCTCCCAGCTCTCAAATTCCTCGATATTCGATTCAACAAATTCCATGGCGATCTCCCTTCTCCCCTGTTTGACTTGAAACTCGATGCTCTGTTCATCAACAACAACGATTTCAAATTTTCCCTACCGGAAAATATCGGCAATTCCCCTGTTTCTGTTCTGGTTTTTGCTAATAACAACATCAATGGCTGTCTCCCCTCTAGTTTATCCAATATGAACAACACACTCAATGAAATTATAATCACGAATAGTGGGTTGATTGGGTGTTTACCGCCGGAAATTGGGTCTTTGAGCAATCTCACCGTCTTCGATGTTAGTGACAACAATCTCATCGGACCGTTGCCGGAGACGATGGCTGGAATGAAGAAATTGGAGCAGCTAAATGTGGCACATAACCAATTATCCGGCGAGATTCCAGCGAGTATTTGTTCGTTGCCGAAATTGCAGAATTTCACTTACTCGTATAATTTCTTCTGCAGTGAGCCGCCGGTGTGCCTGAAACTTCAGGCCAGTGATGACCAGAAAAATTGTTTGCCGGAAAGGCCGCTGCAACGTTCGCCGGAGGGATGCAAAGCTTTCTACTCTTACCCTGTTGATTGCGGCGTCTTTGGGTGTACTCGTCGGCCGCCACGACCGCCGCCTCCGCCGCCATCTTATTGGTGA | 1137 | 50.84 | MKTLSSPLSKSLFLISILILLSQPSHQATPSPTPFLPNPRLLKAYSALQAWKHAITADPTNFTSDWYGPNVCNYSGVFCAPAPDDPDILTVAGIDLNHANVSGTLPDDLGLLTDLALFHINSNHFCGTIPNSFRCLTLLFELDISNNDFSGEFPSVILSLPALKFLDIRFNKFHGDLPSPLFDLKLDALFINNNDFKFSLPENIGNSPVSVLVFANNNINGCLPSSLSNMNNTLNEIIITNSGLIGCLPPEIGSLSNLTVFDVSDNNLIGPLPETMAGMKKLEQLNVAHNQLSGEIPASICSLPKLQNFTYSYNFFCSEPPVCLKLQASDDQKNCLPERPLQRSPEGCKAFYSYPVDCGVFGCTRRPPRPPPPPPSYW | 378 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4728538 | 4729674 | + | CePI673135_05g005780.1 | Cec05g0578 | 202381 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g0578 | 378 | Gene3D | Ribonuclease Inhibitor | 43 | 206 | IPR032675 | - | |
Cec05g0578 | 378 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 231 | 319 | - | - | |
Cec05g0578 | 378 | Pfam | Leucine rich repeat N-terminal domain | 46 | 79 | IPR013210 | - | |
Cec05g0578 | 378 | SUPERFAMILY | L domain-like | 44 | 325 | - | - | |
Cec05g0578 | 378 | Gene3D | Ribonuclease Inhibitor | 207 | 334 | IPR032675 | - | |
Cec05g0578 | 378 | Pfam | Leucine rich repeat | 233 | 292 | IPR001611 | GO:0005515(InterPro) | |
Cec05g0578 | 378 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 27 | 372 | IPR051582 | - | |
Cec05g0578 | 378 | FunFam | Leucine-rich repeat extensin-like protein 1 | 45 | 206 | - | - | |
Cec05g0578 | 378 | Pfam | Leucine Rich Repeat | 139 | 159 | IPR001611 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g1659 | Cec-Chr3:34789556 | Cec05g0578 | Cec-Chr5:4728538 | 1.00E-25 | dispersed | |
Cec05g0578 | Cec-Chr5:4728538 | Cec07g0286 | Cec-Chr7:2825988 | 3.90E-46 | dispersed | |
Cec05g0578 | Cec-Chr5:4728538 | Cec06g1179 | Cec-Chr6:23995130 | 8.20E-36 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g0578 | - | - | - | 0.0 |