Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g0643 | ATGGCTCATATTGCTGTGGAAAGAAATAGGAGACGGCAAATGAATGAACATCTTAGGGGAGATCAAGCCTCGATTATCGGGGGAGTCATAGAGTTTATCAAGGAGTTGCATCAAGTTTTACAATCGTTGGAGTCCAACAAACGGAGGAGGAAGAGTATAAGCCCTAGCCCTGGTCCGAGCCCGAGGCCACAATCAATGGCGGGATCCGATAACGGCTCGCTTGGATTTGAAAATGGAGTTGATGTCGTCGGAGCGTGTTGCAATTCATCGGTCGCAGATGTCGAAGCGAAGATTTCGGGTTCAAACGTGGTTTTGAAGATCATTTCCCGACGGATTCCTGGTCAAGTTTCGAAGATGATTGGTGTCTTCGAGAGGCTCTCCTTTGAGGTTCTTCATCTCAACATTAGTAGTATGGATGACACAGTTCTGTACTCTTTTGTTGTCAAGATAGGGCTTGAATGTCAACTAAGTTTGGAGGAACTAGCTTATGAAGTTCAACAAAGCTTCTGCTCTCAAGTGTATTTATGCCAATGA | 534 | 45.13 | MAHIAVERNRRRQMNEHLRGDQASIIGGVIEFIKELHQVLQSLESNKRRRKSISPSPGPSPRPQSMAGSDNGSLGFENGVDVVGACCNSSVADVEAKISGSNVVLKIISRRIPGQVSKMIGVFERLSFEVLHLNISSMDDTVLYSFVVKIGLECQLSLEELAYEVQQSFCSQVYLCQ | 177 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 5204296 | 5205947 | + | CePI673135_05g006430.1 | Cec05g0643 | 202446 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g0643 | 177 | MobiDBLite | consensus disorder prediction | 44 | 71 | - | - | |
| Cec05g0643 | 177 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 1 | 50 | IPR036638 | GO:0046983(InterPro) | |
| Cec05g0643 | 177 | PANTHER | TRANSCRIPTION FACTOR FAMA | 1 | 169 | IPR044283 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010052(InterPro)|GO:0010374(PANTHER)|GO:0045893(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec05g0643 | Cec-Chr5:5204296 | Cec05g1043 | Cec-Chr5:9118329 | 6.60E-28 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g0643 | - | - | - | 0.0 |