Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0661 ATGGGTTGTGTTCTTGGAAAGTGTTGCACTTCCAGTCGTTACCAGCCGTCTTCCGACGGCGATATCACCCAATTTGGTGATGCCCCGCCGTGTAGTTTACATGGAAAACATATACTAACCGGAAGGTCATTGGAGTCGGTTCGTGTGCCTTCTCACAACTACAATTTGGAGTATTCGCTTCTGACCCAGCGCGGCTACTACCCTGATTCCCCTGATAAAGAAAACCAAGATAGTTTCTGTGTTAGTACACAAATTCGAGGTAACCCGAATATCCACATCTTTGGTGTTTTTGATGGTCATGGTCAATTTGGAATGCAGTGTTCGAATTTCGTTAAGGATAGGGTTGTGCAGCTACTGTGTAATGATTCAAAATTGTTGGAAGATCCTGTTAAAGCTTATAATTCGGCATTTTTGACTGCGAATGATGAATTGCATAATAGTGAGATTGATGATTCCATGAGCGGTACAACAGCTATTACTGTTCTTGTTCTTGGGAATACACTTTACGTTGCGAATGTGGGTGATTCGAGGGCGGTAGTGGCTGTTAAAAATGGGAATCGAATTGTGGCTGAGGACATGTCTCATGATCAAACACCATTTAGGAAGGATGAGTGTGAGAGAGTAAAGCTAGCTGGGGCTAGGGTTTTGACCATTGATCAAATTGAGGGGCTTAGAGATCCGGATATTCAAGTATGGGGTGATGAGGAGAGTGAGGGAAATGATCCTCCTCGATTGTGGTTTCCTAATAGTTTGTATCCTGGTACTGCATTTACGCGGAGTGTAGGAGACAGTGCAGCGGAGAAGATTGGTGTCACTGCTGTCCCTGAGGTTTCAGTTGTTCAACTGACTCAAAACCATCTTTTCTTTGTCGTTGCAAGCGATGGAGTTTTCGAGTTCCTTACAAGTCAAGCTGTTGTTGATATGGCTGCAAGGTATGCCGATCCGCGGGATGCATGCTCTGCTATTGCTGGAGAATCATATAAGCTATGGTTGGAGCATGAAAACCGGACAGATGATATAACAATCATCATCGTTCACATCAAAGGCCTCTCTAATTCAGGTGGTACTGGAACTGTTGGGCTGAATGGGGTCCGCATAGGGCATTCAAATTCAGAGCGGGGAACCTCCGAGATATCAGCTACCACTGGAAGTTCAGAGGCCTTTCGCTCCTTCAGAAGTGATTTATCAGATCTGCATATCTCTCAGCATGTGGGTTTGATGAACAGGAGTACAGCAATTGTCGTTCCATCTCCTGCACAGCACCGACCATTAGAAGTGGAAGTGGGCTAA 1290 45.12 MGCVLGKCCTSSRYQPSSDGDITQFGDAPPCSLHGKHILTGRSLESVRVPSHNYNLEYSLLTQRGYYPDSPDKENQDSFCVSTQIRGNPNIHIFGVFDGHGQFGMQCSNFVKDRVVQLLCNDSKLLEDPVKAYNSAFLTANDELHNSEIDDSMSGTTAITVLVLGNTLYVANVGDSRAVVAVKNGNRIVAEDMSHDQTPFRKDECERVKLAGARVLTIDQIEGLRDPDIQVWGDEESEGNDPPRLWFPNSLYPGTAFTRSVGDSAAEKIGVTAVPEVSVVQLTQNHLFFVVASDGVFEFLTSQAVVDMAARYADPRDACSAIAGESYKLWLEHENRTDDITIIIVHIKGLSNSGGTGTVGLNGVRIGHSNSERGTSEISATTGSSEAFRSFRSDLSDLHISQHVGLMNRSTAIVVPSPAQHRPLEVEVG 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5357613 5360983 + CePI673135_05g006610.1 Cec05g0661 202464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0661 429 ProSiteProfiles PPM-type phosphatase domain profile. 57 347 IPR001932 -
Cec05g0661 429 SUPERFAMILY PP2C-like 45 349 IPR036457 -
Cec05g0661 429 Gene3D - 43 349 IPR036457 -
Cec05g0661 429 PANTHER PROTEIN PHOSPHATASE 58 346 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec05g0661 429 Pfam Protein phosphatase 2C 79 322 IPR001932 -
Cec05g0661 429 SMART PP2C_4 49 345 IPR001932 -
Cec05g0661 429 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 52 349 - -
Cec05g0661 429 CDD PP2Cc 73 347 IPR001932 -
Cec05g0661 429 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0661 Cec-Chr5:5357613 Cec06g0972 Cec-Chr6:13706746 1.10E-39 dispersed
Cec05g2476 Cec-Chr5:35844511 Cec05g0661 Cec-Chr5:5357613 1.20E-10 transposed
Cec06g1655 Cec-Chr6:30152522 Cec05g0661 Cec-Chr5:5357613 7.20E-10 transposed
Cec05g0661 Cec-Chr5:5357613 Cec06g0567 Cec-Chr6:6278687 3.80E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0661 - - - 0.0