Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0664 ATGGCATCAATGGTCGCTAAACCAAGTTGTCCCAGTACTAGCAATCACGGGCCTTCTTCGATGACTGTCCAGGAAAAAGGGAGTAGGAATAAGAGGAAATACAGAGCAGATCCACCTTTAGGTGATCTTAATAAGATCACTTCTTCATCTCAAGAGGAATGTCCGAGTTATGAGTTTTCAGCTGAGAAATTTGAGATTAGTTCAAGTGTGGGGCAAACCAGTGGGTGTGACCTTTGTAGTATTAGTCAAGAATTTTCTGCTGGATTGAAACTCGATCTCGGATTGTCCAGTGGAGGCTCTTCTGACGTTGGGATAAACTGGCCAAGAGGGGAATTAGAAGTTGATGAGTATCAAGATGCTGATTGGAGTGACCTTACAGAAGCTCAACTCGAAGAACTAGTTTTAAACAATTTGGACACAATATTCAAGAGTGCAATCAAGAAAATTGTTGCTTCTGGATACACTGAAGAGGTTGCTATAAAAGCTGTCTCAAGGTCTGGCATCTGTTTTGGTTGTAAAGATACTGTCTCAAATATAGTGGATAACACCTTAGCTTTCCTTAGAAGTGGCCAAGAAATTGATCATTCAAGGGAACACTATTTTGAAGATTTACAGCAACTAGAAAAATATATTTTAGCCGAATTAGTTTGTGTTCTACGAGAGGTTAGGCCTTTCTTCAGCACCGGCGATGCAATGTGGTGCTTATTGATTTCCGACATGAATGTATCTCTTGCGTGTGCAATGGATAGCGACCCATGTAATACACTTGCCTGTGATGGGACTTTGAATGAGAGCTTGTCTAACTCTATCCCACAGTTAAAAACAGAAGTCAACAGCTCTGTGATGAATCTTCCTAAGCCTGTGAAGCCAATTTCTCCAATCAGCTGTGCTCATGGTTCTCAATCTAATGGACCAGCCACTCTAGGAGTTCCTAGTACTAAAAAACAGAAGGACCCGTTATTTTCAAGTGGACCATTATCAGAAAAAGAATTGCAAAATTCCACCTCTGATGTTGAGGAATCATTTAGTGTGGCTGGAAACTCTCAAACTTCTGTGTCCGAAGAAAACATTGGGAGCAGTAGAAAGGTTCATTCTAATATAACTAAGAGAGAATACATGCTACGACAGAAGTCACTTCATGTGGATAAAAACTTTCGAACATATGGACCTAAGGGTTCATCAAGAGCTGGAAAGCTGGCTGGTTTGGGGGGTTTAATGCTGGATAAGAAACTAAAGTCTGTTTCAGGCTCCACTGCAGTAAACTTTAAGAATGCTTCTTTGAAAATAAGCAAGGCTATGGGAATTGATGTGGCCCAAGACAATGGGAACCATAATCTTTCCACCATCGACATTCCTTCTTCCTCTCTATCATTTAACTTGGAAAATATTAACACTGTTTCTCCTTTTTCTAAGACCAATGTACCATCCTCAATGCCCGCACCTAGTTCACCACCTGCATTACCTGCAAGTAATACTTCATCTGCGCTACCAACAACTGATATTGATCTTTCTCTTTCTTTGCCTGCTAAAAGTAATCAACCCTCAGTGCCTATCAACTGCAATGCTGAGTCTTCTACTAGTAGTTTTGTTGAGAAACCTTATGAAAAGTCCCTTGGACAGTGGTTTCCTAAGGATAAGAAGGACGAGATGGTTTTGAATCTAGTGCCAAGAGTTCGGGAATTACAAAATCAGCTGCACGAGTGGACAGAGTGGGCCAATCATAAGGTCATGCAGGCTGCAAGGAGGCTAAGTAAGGACAAGGCTGAACTGAAGACTTTGAAGCAAGAAAAAGAGGAAGTTGAACGGCTGAAAAAGGAGAAGCAGACTCTGGAGGAAAATACAATGAAGAAACTTTCTGAGATGGAACATGCATTGTGCAAGGCTAGTGGGCAGGTTGAACTTGCTAACTCTGCTGTTCGGAGGCTTGAAGTGGAGAATGCTGCACTACGACAGGATATGGAGGTTGCAAAATTACGTGCCACAGAATCAGCTGCTAGCTATCAAGAGGTTTGTAAGAGGGAAAAGAAAACACTGTTGAAAGTTCAATCATGGGAGAAGCAGAAAATGTTGTTTCAAGAAGAACACACAACCGAAAAACGAAAAGTTAAACAACTAATACAGGAACTTGAGCAGGCCAGAGATCTCCAGGAGCAACTTGAGGGTAGATGGAAGTTGGAAGAGAGAGCAAAAGATGAGCTGCTCGTGCAGGCTGCTTCATTGAGAAAGGAGAGAGAACAAATCGAAGATTCAGTAAAAGTAAAGGAGGATACAATTAAATTGAAAGCAGAAAATAATCTTATAAAATACAAAGACGATATTCAAAAGCTTGAAAAAGAAATCTCTGTGTTGAGACTTAAGACCGATTCTTCAAGAATTGCAGCTCTTAAGAGAGGCATAGACGGAAGTTATGCCAGTAGGCTTACAGATACCAGAAATAGCACAGATCACAAAGAGTCATGGTCCCCGATTGTCTCGGACTCAATGAAGGGTCTTTATGAATACTCTGGGACGGGGGGCGTGAAGCGGGAACGAGAGTGTGTGATGTGCCTTTCAGAGGAGATGTCAGTAGTTTTTCTTCCATGCGCTCATCAAGTGGTGTGCACAACCTGCAATGAACTACATGAAAAACAGGGTATGAAAGATTGTCCATCTTGTAGGAGCCTGATACAGCGGCGTATTCCAGTCTGTTATGCTCGCTCAAAGTGTTGTGGAAAATCAAAGTTTGGCTGCTATGTTGGTGTTATTGTCAATGCTTCTTACCTTACATCCCAAGCAACTGTTGAACAAGAGGAAGATAAGATAGAGGAGGAGTGGAGGATTAGTCCTCTCTCCTTGTGTCCAAGACGATGCCACGTGTCGCAGTCCTGTGACTCCGATGTTCCTTCCGTCCAAAAAAACTGTGATCCCCAGTCCTCACAAGATTCGCACATTCATTTTTTGAAAGTTTCTACAACATTGGATATTGAAGTGTGTACTGTTCTTAATGCTTCAGAGATCATTGAGTTTTTAACTTGTGACCATAATAGGAAATCAGGGTTGATTGGAGAGGAAAGAATGTCCTCCTTAATGCATGGATCACTGCTGCAGACTATAGCAGATTGTGATCAAGGATTGTTGAGGAGGGGAAAGTACCATTTGGGTCACACCCATCTTCTCAAAGAAAAACATTCATCTTTGAGGGCAAATAGGGGTGGTAGAAGTAAAGGTATTTGCTGCCAGGACTTGCATATCAACAGCCCAAAGCCAGAGAGACATGAGCCTCCTAATCGTCATGGTTCAAGAGCCGATGCTGTCCTTAGTCCTGTAATACCTACTACCAAAAAGAGAGTATTCACTTTTGGAAAAGGAAGGAGTGAGGGTAACAAGAGCATGAAGTCCTTGTTGGGAGGGAAGGGAGCAAACCTTGCAGAGATGGCGAGCATTGGGTTGTCCGTTCCGCCTGGACTCACCATCTCAACTGAAGCATGCCAAGAGTATGAGCAAAATGGAAATAGATTACCAGATGGCTTGTGGGAAGAGATACTGGAAGGCTTGGAAAGTGTTGAAAAGGACATGGGAGCGGTTCTTGGAGATCCTTCGAAGCCTCTCCTTCTCTCGGTTCGGTCTGGTGCTGCTATCTCAATGCCTGGAATGATGGATACTGTCCTTAACCTTGGATTAAACGACGAAGTGGTTTCTGGATTGGCTGCCAAAAGTGGAGAACGCTTTGCGTACGACTCTTATAGGCGCTTTCTAGATATGTTTGGAAATGTTGTGATGGGCATTTCACATTCTTCGTTTGAGGAGAAGTTGGAAAACTTGAAAATTGCAAAAGGAAAGGCACTAGATACTGACTTAACCGCCTCAGATCTTAAGGAGCTTGTGGAACAGTACAAGGATGCTTACGTCGAAGCTACGGGTGAAACGTTTCCTTCAGATCCAAAACAGCAGTTGCAATTAGCTGTCAAAGCAGTTTTCAACTCCTGGGATAGCCCGAGGGCCAACAAATATCGAAGCATCAATCAAATCACCGGGTTGAAGGGAACTGCTGTGAACATTCAATCCATGGTGTTTGGAAACATGGGCCCTACTTCTGGGACTGGAGTATTGTTCACTAGAAATCCAAGTACTGGAGAAAAGAAGCTGTATGGAGAGTTCCTCATCAATGCTCAGGGTGAAGACGTAGTTGCTGGGATAAGGACGCCTGAAGACTTGGACACCATGAAAGATTGCATGCCTGAAGCTTACAAGGAGCTGGTTGAGAACTGTGAAATTTTAGAGAGACATTACAAAGACATGATGGATATTGAGTTCACAGTCCAAGAAAATAGGCTATGGATGTTGCAATGTCGTTCTGGAAAACGCACAGGTAAGGGTGCTGTGAAGATAGCTGTAGATTTGGTGAATGAAGGACTTGTTGACACTCGTACTGCAATTAAGATGGTTGAGCCACAACATCTCGACCAACTTCTTCATCCTCAGTTTGAAGATCCCTCTGCTTACAAGGACCAAGTGGTTGCGACAGGCTTGCCTGCATCTCCCGGAGCAGCAGTGGGGCAGGTAGTATTCAATGCCGATGACGCTGAAGCCTGGCATGCTCAGGGAAAGAGTGTCATCTTGGTAAGGGCAGAGACCAGCCCAGAGGATGTTGGTGGTATGCATGCAGCTACTGGAATTTTGACAGCTAGAGGTGGAATGACTTCTCATGCTGCTGTTGTCGCTCGTGGATGGGGGAAATGCTGCATTTCTGGTTGCTCAGATATCAGAGTAAACGACTCCGAGAAGGTTCTTGTCATTGGAGATCTGGTAATCAATGAAGGTGACTGGATATCCCTCAATGGCTCTACAGGTGAAGTGATATTGGGCAAGCAGCCACTCTCTCCCCCAGCTTTAAGTAGGGATTTGGAGATCTTTATGTCTTGGGCTGATCAAATAAGACGTCTCAAGGTTATGGCCAATGCTGACACTCCTGAAGATGCTCTTACAGCTCGTAACAATGGCGCCCAAGGAATCGGCTTGTGCAGGACAGAGCATATGTTCTTTGCATCTGATGAGAGGATCAGAGCTGTAAGGAAGATGATAATGGCAGTTACAGTGGAACAAAGAAAGGCAGCTTTGGACTTGTTACTACCTTATCAAAGATCTGATTTTGAGGGAATTTTCCGCGCGATGGATGGTCTTCCAGTGACTATTAGACTGTTGGACCCTCCACTCCATGAATTCCTTCCGGAAGGCGACCTGGAAGAGATTGTGAAAGGACTAACTGCAGAGACTGAAATGAGTGAAGATGAAGTGTTCTCTAGAATTGAGAAGCTCTCCGAAGTTAACCCAATGCTCGGTTTTCGCGGTTGCAGGCTTGGGATTTCGTACCCGGAGCTGACGGAAATGCAAGCTCGTGCTATTTTCCAAGCTGCTATCTCAATGAGCAATCAAGGAATTAAAGTTTTGCCTGAGATAATGGTTCCATTGGTTGGAACACCACAAGAACTAAGACATCAAGTCAGCTCGATTCGCCGCGTTGCTGAGAATGTGTTCTCAGAGATGGGTTCCTCCTTAAATTACAAAGTGGGAACCATGATTGAAATTCCTAGAGCTGCTCTGGTTGCAGATGAGATTGCTAAGGAAGCAGAGTTCTTCTCATTTGGGACCAATGATCTTACACAAATGACTTTTGGATACAGTAGAGATGATGTTGGCAAGTTTCTTCCTATTTATATATCCAAAGGAATTCTGCAAAATGACCCTTTTGAGGTGCTTGACCAGAAAGGAGTTGGGCAACTGATCAAGCTGGCTACAGAAAAAGGGAGGGCAGCTAGGCCAAGTTTGAAGGTTGGAATTTGTGGAGAACATGGAGGAGAGCCTTCATCTGTTGCATTCTTTGCAGAGGCTGGACTTGATTATGTTTCTTGTTCTCCTTTCAGAGTTCCAGTTGCAAGATTGGCTGCAGCCCAAGTTGCTGTTTAA 5943 43.68 MASMVAKPSCPSTSNHGPSSMTVQEKGSRNKRKYRADPPLGDLNKITSSSQEECPSYEFSAEKFEISSSVGQTSGCDLCSISQEFSAGLKLDLGLSSGGSSDVGINWPRGELEVDEYQDADWSDLTEAQLEELVLNNLDTIFKSAIKKIVASGYTEEVAIKAVSRSGICFGCKDTVSNIVDNTLAFLRSGQEIDHSREHYFEDLQQLEKYILAELVCVLREVRPFFSTGDAMWCLLISDMNVSLACAMDSDPCNTLACDGTLNESLSNSIPQLKTEVNSSVMNLPKPVKPISPISCAHGSQSNGPATLGVPSTKKQKDPLFSSGPLSEKELQNSTSDVEESFSVAGNSQTSVSEENIGSSRKVHSNITKREYMLRQKSLHVDKNFRTYGPKGSSRAGKLAGLGGLMLDKKLKSVSGSTAVNFKNASLKISKAMGIDVAQDNGNHNLSTIDIPSSSLSFNLENINTVSPFSKTNVPSSMPAPSSPPALPASNTSSALPTTDIDLSLSLPAKSNQPSVPINCNAESSTSSFVEKPYEKSLGQWFPKDKKDEMVLNLVPRVRELQNQLHEWTEWANHKVMQAARRLSKDKAELKTLKQEKEEVERLKKEKQTLEENTMKKLSEMEHALCKASGQVELANSAVRRLEVENAALRQDMEVAKLRATESAASYQEVCKREKKTLLKVQSWEKQKMLFQEEHTTEKRKVKQLIQELEQARDLQEQLEGRWKLEERAKDELLVQAASLRKEREQIEDSVKVKEDTIKLKAENNLIKYKDDIQKLEKEISVLRLKTDSSRIAALKRGIDGSYASRLTDTRNSTDHKESWSPIVSDSMKGLYEYSGTGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSLIQRRIPVCYARSKCCGKSKFGCYVGVIVNASYLTSQATVEQEEDKIEEEWRISPLSLCPRRCHVSQSCDSDVPSVQKNCDPQSSQDSHIHFLKVSTTLDIEVCTVLNASEIIEFLTCDHNRKSGLIGEERMSSLMHGSLLQTIADCDQGLLRRGKYHLGHTHLLKEKHSSLRANRGGRSKGICCQDLHINSPKPERHEPPNRHGSRADAVLSPVIPTTKKRVFTFGKGRSEGNKSMKSLLGGKGANLAEMASIGLSVPPGLTISTEACQEYEQNGNRLPDGLWEEILEGLESVEKDMGAVLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVSGLAAKSGERFAYDSYRRFLDMFGNVVMGISHSSFEEKLENLKIAKGKALDTDLTASDLKELVEQYKDAYVEATGETFPSDPKQQLQLAVKAVFNSWDSPRANKYRSINQITGLKGTAVNIQSMVFGNMGPTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLDTMKDCMPEAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKGAVKIAVDLVNEGLVDTRTAIKMVEPQHLDQLLHPQFEDPSAYKDQVVATGLPASPGAAVGQVVFNADDAEAWHAQGKSVILVRAETSPEDVGGMHAATGILTARGGMTSHAAVVARGWGKCCISGCSDIRVNDSEKVLVIGDLVINEGDWISLNGSTGEVILGKQPLSPPALSRDLEIFMSWADQIRRLKVMANADTPEDALTARNNGAQGIGLCRTEHMFFASDERIRAVRKMIMAVTVEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEEIVKGLTAETEMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFQAAISMSNQGIKVLPEIMVPLVGTPQELRHQVSSIRRVAENVFSEMGSSLNYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYISKGILQNDPFEVLDQKGVGQLIKLATEKGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPVARLAAAQVAV 1980
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5383870 5399489 + CePI673135_05g006640.1 Cec05g0664 202467

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0664 1980 Gene3D - 1110 1350 IPR013815 GO:0005524(InterPro)
Cec05g0664 1980 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 1627 1979 IPR015813 GO:0003824(InterPro)
Cec05g0664 1980 Gene3D - 1351 1448 - -
Cec05g0664 1980 Coils Coil 632 659 - -
Cec05g0664 1980 NCBIfam pyruvate, phosphate dikinase 1107 1980 IPR010121 GO:0006090(InterPro)|GO:0050242(InterPro)
Cec05g0664 1980 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 1109 1486 - -
Cec05g0664 1980 Gene3D Phosphohistidine domain 1490 1616 - -
Cec05g0664 1980 Coils Coil 730 757 - -
Cec05g0664 1980 FunFam Pyruvate, phosphate dikinase, chloroplastic 1640 1980 - -
Cec05g0664 1980 Pfam Pyruvate phosphate dikinase, AMP/ATP-binding domain 1408 1462 IPR002192 GO:0005524(InterPro)|GO:0016301(InterPro)|GO:0016310(InterPro)
Cec05g0664 1980 Pfam Pyruvate phosphate dikinase, AMP/ATP-binding domain 1167 1399 IPR002192 GO:0005524(InterPro)|GO:0016301(InterPro)|GO:0016310(InterPro)
Cec05g0664 1980 SUPERFAMILY RING/U-box 845 892 - -
Cec05g0664 1980 ProSiteProfiles Zinc finger RING-type profile. 846 886 IPR001841 -
Cec05g0664 1980 Pfam PIR2-like, helical domain 137 249 IPR046527 -
Cec05g0664 1980 ProSitePatterns PEP-utilizing enzymes signature 2. 1870 1888 IPR023151 GO:0016772(InterPro)
Cec05g0664 1980 MobiDBLite consensus disorder prediction 295 363 - -
Cec05g0664 1980 MobiDBLite consensus disorder prediction 1 49 - -
Cec05g0664 1980 Coils Coil 759 786 - -
Cec05g0664 1980 PANTHER PHOSPHOENOLPYRUVATE DIKINASE-RELATED 1105 1980 IPR010121 GO:0006090(InterPro)|GO:0050242(InterPro)
Cec05g0664 1980 CDD RING-HC_MIP1-like 841 895 - -
Cec05g0664 1980 ProSitePatterns PEP-utilizing enzymes phosphorylation site signature. 1557 1568 IPR018274 GO:0016310(InterPro)|GO:0016772(InterPro)
Cec05g0664 1980 MobiDBLite consensus disorder prediction 1 25 - -
Cec05g0664 1980 MobiDBLite consensus disorder prediction 472 495 - -
Cec05g0664 1980 Pfam PEP-utilising enzyme, mobile domain 1529 1610 IPR008279 GO:0016310(InterPro)|GO:0016772(InterPro)
Cec05g0664 1980 Gene3D Pyruvate Phosphate Dikinase, domain 2 1449 1637 - -
Cec05g0664 1980 Coils Coil 576 620 - -
Cec05g0664 1980 Coils Coil 1281 1301 - -
Cec05g0664 1980 Gene3D Death Domain, Fas 727 854 IPR011029 -
Cec05g0664 1980 Gene3D - 655 892 - -
Cec05g0664 1980 MobiDBLite consensus disorder prediction 292 364 - -
Cec05g0664 1980 FunFam Pyruvate, phosphate dikinase, chloroplastic 1351 1448 - -
Cec05g0664 1980 Pfam PEP-utilising enzyme, PEP-binding domain 1625 1979 IPR000121 GO:0016310(InterPro)|GO:0016772(InterPro)
Cec05g0664 1980 FunFam Pyruvate, phosphate dikinase, chloroplastic 1490 1616 - -
Cec05g0664 1980 Gene3D - 662 726 - -
Cec05g0664 1980 Coils Coil 692 722 - -
Cec05g0664 1980 Gene3D - 1640 1980 IPR040442 -
Cec05g0664 1980 Gene3D - 1219 1303 - -
Cec05g0664 1980 Pfam Zinc finger, C3HC4 type (RING finger) 843 891 - -
Cec05g0664 1980 SUPERFAMILY Phosphohistidine domain 1494 1618 IPR036637 GO:0016310(InterPro)|GO:0016772(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0664 K01006 - - csv:101214608 1839.7
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0664 Cec-Chr5:5383870 Cec10g0185 Cec-Chr10:1834053 2.40E-54 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g397 . . . . . Bpe14g01163 . . . . . Cma14g01661 Car06g01249 Car14g01494 . Cpe08g00228 Cpe03g01402 Bhi01g00890 . . . Hepe05g1501 . Lcy11g1476 . . . . . . . . . . . Lsi05g01477 . . Cme06g00668 . . . . . Bpe13g00635 . Bma06g01529 . . Cmo14g01705 . . . . . . . . . . . . . Cla05g00597 Cam05g0657 Cec05g0664 Cco05g0661 Clacu05g0650 Cmu05g0619 Cre05g0688 . Csa03g01393 Chy06g00636 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010599 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 0 1 1 1 1 1 1 1 1 1 1 1 32