Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0684 ATGGGGTGTGTTTTTGGGCGAGAGGTATCTGAGAATCCCGTCCAGAAAGAAGAGGAGGAGGAGAGACAGAAGGCGGAGGAGGAAATTAGGGTTTCTGTCAAACCCGAGGTTTCTCAGGTTCAGGCTAATAATGCTCGCAATGGTGGAAGTAGGAAGGAGGTTGAAGATGATAGAGGTTCGAGGCAGAGAAGTGAGCGGCGGCGAAGGCCGAATCCCAGATCGAGTAATCCGCCGAAACATGTGCATGGCGAGCAAGTCGCCGCTGGATGGCCTTCTTGGCTTTCCGCCGTCGCCGGTGAGGCTATCAACGGATGGATTCCTCGCCGTGCTGACTCTTTCGAGAAGCTTGATAAAATTGGGCAAGGGACATATAGTAATGTGTACAAAGCAAGGGACACATTGACAGGGAAGATTGTGGCTCTAAAGAAGGTTCGTTTTGACAATTTGGAGCCTGAGAGTGTGAGATTTATGGCCCGAGAAATTCTCATCCTGCGACGTCTGGATCATCCCAATGTTGTAAAACTCGAAGGTTTAGTGACATCCCGGATGTCTTGTAGTTTATATCTTGTATTTGAATACATGGAGCACGATTTGGCTGGACTTGCTTCGAGCCCCGGGATCAAGTTTACAGAACCACAGGTTAAATGCTACATGCACCAATTGTTATCAGGGCTCGAACACTGTCATAACCGTCATGTGCTGCATCGAGATATAAAGGGATCGAATCTTCTGATTGGTAACGATGGGATCCTTAAGATAGCTGATTTTGGATTGGCTTCTGTCTTTGATCCCAACCACAAGCAGCCAATGACAAGTAGGGTGGTTACTCTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCTACTGATTATGGCGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTAGCTGAGCTGTTAGCCGGAAAGCCTATCATGCCCGGTCGCACGGAGGTTGAGCAGCTGCATAAGATATTTAAGTTATGTGGCTCTCCTACAGACGAATACTGGAAAAAGTCAAGGTTGCCTCATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCATAGCAGAGACATTTAAAGACTTCCCACCATCGTCTCTGCCACTAATTGAGACACTTCTTGCAATCGACCCAGCTGAACGCCTGACCGCCACTGCTGCATTACATAGTGAATTTTTCACTACCAAACCATATGCTTGTGAACCTTCCAGCCTCCCTAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTCCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCAGAAGCAATGTAGATGGGGTGAAAAAATCACGGGCACGTGATCGAGTTGTTCGTGCAATTCCTGCTCCAGAAGCCAATGCTGAGCTTCAAGCCAATCTCGATAGGCGACGTCTCATAACACACGCAAATGCAAAGAGCAAGAGTGAAAAGTTTCCTCCTCCACATCAAGATGGAGCACTTGGCTACCCGCTCGGATCTTCGCATCATATAGATCCAATCTACGATCCTCCCGACGTTCCATTTAGCACAATGAATTTCTCGTATCCAAAAGCAAACATCCACACATGGTCTGGTCCTTTGATGGATCCAGCTGCTGTTGGTGCTCCAAGAAGGAAAAAACACACAGCAGGCGATGGGCATTCATCAAAATCATCTAAAGACTTACGAAAAGATAAAAATTCAGTTCGGATCTAA 1716 47.09 MGCVFGREVSENPVQKEEEEERQKAEEEIRVSVKPEVSQVQANNARNGGSRKEVEDDRGSRQRSERRRRPNPRSSNPPKHVHGEQVAAGWPSWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLASSPGIKFTEPQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIGNDGILKIADFGLASVFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTDEYWKKSRLPHATIFKPQHSYKRCIAETFKDFPPSSLPLIETLLAIDPAERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNVDGVKKSRARDRVVRAIPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHIDPIYDPPDVPFSTMNFSYPKANIHTWSGPLMDPAAVGAPRRKKHTAGDGHSSKSSKDLRKDKNSVRI 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5607655 5611491 - CePI673135_05g006840.1 Cec05g0684 202487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0684 571 SUPERFAMILY Protein kinase-like (PK-like) 106 402 IPR011009 -
Cec05g0684 571 MobiDBLite consensus disorder prediction 49 72 - -
Cec05g0684 571 MobiDBLite consensus disorder prediction 532 571 - -
Cec05g0684 571 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Cec05g0684 571 MobiDBLite consensus disorder prediction 541 571 - -
Cec05g0684 571 MobiDBLite consensus disorder prediction 11 33 - -
Cec05g0684 571 ProSiteProfiles Protein kinase domain profile. 113 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g0684 571 Gene3D Transferase(Phosphotransferase) domain 1 196 436 - -
Cec05g0684 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g0684 571 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524(InterPro)
Cec05g0684 571 FunFam probable serine/threonine-protein kinase At1g54610 196 437 - -
Cec05g0684 571 Pfam Protein kinase domain 113 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g0684 571 MobiDBLite consensus disorder prediction 1 85 - -
Cec05g0684 571 FunFam probable serine/threonine-protein kinase At1g54610 100 195 - -
Cec05g0684 571 PANTHER CELL DIVISION PROTEIN KINASE 112 397 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cec05g0684 571 SMART serkin_6 113 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g0684 571 CDD STKc_CDK9_like 113 397 - -
Cec05g0684 571 MobiDBLite consensus disorder prediction 477 498 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1707 Cec-Chr2:34799843 Cec05g0684 Cec-Chr5:5607655 2.70E-224 dispersed
Cec02g1848 Cec-Chr2:36269350 Cec05g0684 Cec-Chr5:5607655 5.40E-162 dispersed
Cec03g1707 Cec-Chr3:35313914 Cec05g0684 Cec-Chr5:5607655 1.80E-231 dispersed
Cec05g0684 Cec-Chr5:5607655 Cec05g1107 Cec-Chr5:9800993 3.90E-183 dispersed
Cec05g0680 Cec-Chr5:5557702 Cec05g0684 Cec-Chr5:5607655 3.10E-22 proximal
Cec02g2538 Cec-Chr2:42410258 Cec05g0684 Cec-Chr5:5607655 3.40E-97 transposed
Cec03g0381 Cec-Chr3:4241619 Cec05g0684 Cec-Chr5:5607655 2.20E-202 transposed
Cec04g0029 Cec-Chr4:671010 Cec05g0684 Cec-Chr5:5607655 8.60E-11 transposed
Cec04g1271 Cec-Chr4:32309395 Cec05g0684 Cec-Chr5:5607655 6.70E-122 transposed
Cec08g0186 Cec-Chr8:3525833 Cec05g0684 Cec-Chr5:5607655 2.20E-161 transposed
Cec08g0290 Cec-Chr8:6246007 Cec05g0684 Cec-Chr5:5607655 2.20E-123 transposed
Cec11g0067 Cec-Chr11:826153 Cec05g0684 Cec-Chr5:5607655 3.40E-171 transposed
Cec02g1662 Cec-Chr2:34296098 Cec05g0684 Cec-Chr5:5607655 1.10E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71989 PF00069 Pkinase 1.80E-68 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0684 K08819 - csv:101217952 1073.54