Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g0684 | ATGGGGTGTGTTTTTGGGCGAGAGGTATCTGAGAATCCCGTCCAGAAAGAAGAGGAGGAGGAGAGACAGAAGGCGGAGGAGGAAATTAGGGTTTCTGTCAAACCCGAGGTTTCTCAGGTTCAGGCTAATAATGCTCGCAATGGTGGAAGTAGGAAGGAGGTTGAAGATGATAGAGGTTCGAGGCAGAGAAGTGAGCGGCGGCGAAGGCCGAATCCCAGATCGAGTAATCCGCCGAAACATGTGCATGGCGAGCAAGTCGCCGCTGGATGGCCTTCTTGGCTTTCCGCCGTCGCCGGTGAGGCTATCAACGGATGGATTCCTCGCCGTGCTGACTCTTTCGAGAAGCTTGATAAAATTGGGCAAGGGACATATAGTAATGTGTACAAAGCAAGGGACACATTGACAGGGAAGATTGTGGCTCTAAAGAAGGTTCGTTTTGACAATTTGGAGCCTGAGAGTGTGAGATTTATGGCCCGAGAAATTCTCATCCTGCGACGTCTGGATCATCCCAATGTTGTAAAACTCGAAGGTTTAGTGACATCCCGGATGTCTTGTAGTTTATATCTTGTATTTGAATACATGGAGCACGATTTGGCTGGACTTGCTTCGAGCCCCGGGATCAAGTTTACAGAACCACAGGTTAAATGCTACATGCACCAATTGTTATCAGGGCTCGAACACTGTCATAACCGTCATGTGCTGCATCGAGATATAAAGGGATCGAATCTTCTGATTGGTAACGATGGGATCCTTAAGATAGCTGATTTTGGATTGGCTTCTGTCTTTGATCCCAACCACAAGCAGCCAATGACAAGTAGGGTGGTTACTCTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCTACTGATTATGGCGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTAGCTGAGCTGTTAGCCGGAAAGCCTATCATGCCCGGTCGCACGGAGGTTGAGCAGCTGCATAAGATATTTAAGTTATGTGGCTCTCCTACAGACGAATACTGGAAAAAGTCAAGGTTGCCTCATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCATAGCAGAGACATTTAAAGACTTCCCACCATCGTCTCTGCCACTAATTGAGACACTTCTTGCAATCGACCCAGCTGAACGCCTGACCGCCACTGCTGCATTACATAGTGAATTTTTCACTACCAAACCATATGCTTGTGAACCTTCCAGCCTCCCTAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTCCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCAGAAGCAATGTAGATGGGGTGAAAAAATCACGGGCACGTGATCGAGTTGTTCGTGCAATTCCTGCTCCAGAAGCCAATGCTGAGCTTCAAGCCAATCTCGATAGGCGACGTCTCATAACACACGCAAATGCAAAGAGCAAGAGTGAAAAGTTTCCTCCTCCACATCAAGATGGAGCACTTGGCTACCCGCTCGGATCTTCGCATCATATAGATCCAATCTACGATCCTCCCGACGTTCCATTTAGCACAATGAATTTCTCGTATCCAAAAGCAAACATCCACACATGGTCTGGTCCTTTGATGGATCCAGCTGCTGTTGGTGCTCCAAGAAGGAAAAAACACACAGCAGGCGATGGGCATTCATCAAAATCATCTAAAGACTTACGAAAAGATAAAAATTCAGTTCGGATCTAA | 1716 | 47.09 | MGCVFGREVSENPVQKEEEEERQKAEEEIRVSVKPEVSQVQANNARNGGSRKEVEDDRGSRQRSERRRRPNPRSSNPPKHVHGEQVAAGWPSWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLASSPGIKFTEPQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIGNDGILKIADFGLASVFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTDEYWKKSRLPHATIFKPQHSYKRCIAETFKDFPPSSLPLIETLLAIDPAERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNVDGVKKSRARDRVVRAIPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHIDPIYDPPDVPFSTMNFSYPKANIHTWSGPLMDPAAVGAPRRKKHTAGDGHSSKSSKDLRKDKNSVRI | 571 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5607655 | 5611491 | - | CePI673135_05g006840.1 | Cec05g0684 | 202487 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g0684 | 571 | SUPERFAMILY | Protein kinase-like (PK-like) | 106 | 402 | IPR011009 | - | |
Cec05g0684 | 571 | MobiDBLite | consensus disorder prediction | 49 | 72 | - | - | |
Cec05g0684 | 571 | MobiDBLite | consensus disorder prediction | 532 | 571 | - | - | |
Cec05g0684 | 571 | Gene3D | Phosphorylase Kinase; domain 1 | 100 | 195 | - | - | |
Cec05g0684 | 571 | MobiDBLite | consensus disorder prediction | 541 | 571 | - | - | |
Cec05g0684 | 571 | MobiDBLite | consensus disorder prediction | 11 | 33 | - | - | |
Cec05g0684 | 571 | ProSiteProfiles | Protein kinase domain profile. | 113 | 397 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g0684 | 571 | Gene3D | Transferase(Phosphotransferase) domain 1 | 196 | 436 | - | - | |
Cec05g0684 | 571 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 233 | 245 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g0684 | 571 | ProSitePatterns | Protein kinases ATP-binding region signature. | 119 | 142 | IPR017441 | GO:0005524(InterPro) | |
Cec05g0684 | 571 | FunFam | probable serine/threonine-protein kinase At1g54610 | 196 | 437 | - | - | |
Cec05g0684 | 571 | Pfam | Protein kinase domain | 113 | 397 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g0684 | 571 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - | |
Cec05g0684 | 571 | FunFam | probable serine/threonine-protein kinase At1g54610 | 100 | 195 | - | - | |
Cec05g0684 | 571 | PANTHER | CELL DIVISION PROTEIN KINASE | 112 | 397 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Cec05g0684 | 571 | SMART | serkin_6 | 113 | 397 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g0684 | 571 | CDD | STKc_CDK9_like | 113 | 397 | - | - | |
Cec05g0684 | 571 | MobiDBLite | consensus disorder prediction | 477 | 498 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1707 | Cec-Chr2:34799843 | Cec05g0684 | Cec-Chr5:5607655 | 2.70E-224 | dispersed | |
Cec02g1848 | Cec-Chr2:36269350 | Cec05g0684 | Cec-Chr5:5607655 | 5.40E-162 | dispersed | |
Cec03g1707 | Cec-Chr3:35313914 | Cec05g0684 | Cec-Chr5:5607655 | 1.80E-231 | dispersed | |
Cec05g0684 | Cec-Chr5:5607655 | Cec05g1107 | Cec-Chr5:9800993 | 3.90E-183 | dispersed | |
Cec05g0680 | Cec-Chr5:5557702 | Cec05g0684 | Cec-Chr5:5607655 | 3.10E-22 | proximal | |
Cec02g2538 | Cec-Chr2:42410258 | Cec05g0684 | Cec-Chr5:5607655 | 3.40E-97 | transposed | |
Cec03g0381 | Cec-Chr3:4241619 | Cec05g0684 | Cec-Chr5:5607655 | 2.20E-202 | transposed | |
Cec04g0029 | Cec-Chr4:671010 | Cec05g0684 | Cec-Chr5:5607655 | 8.60E-11 | transposed | |
Cec04g1271 | Cec-Chr4:32309395 | Cec05g0684 | Cec-Chr5:5607655 | 6.70E-122 | transposed | |
Cec08g0186 | Cec-Chr8:3525833 | Cec05g0684 | Cec-Chr5:5607655 | 2.20E-161 | transposed | |
Cec08g0290 | Cec-Chr8:6246007 | Cec05g0684 | Cec-Chr5:5607655 | 2.20E-123 | transposed | |
Cec11g0067 | Cec-Chr11:826153 | Cec05g0684 | Cec-Chr5:5607655 | 3.40E-171 | transposed | |
Cec02g1662 | Cec-Chr2:34296098 | Cec05g0684 | Cec-Chr5:5607655 | 1.10E-23 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71989 | PF00069 | Pkinase | 1.80E-68 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g0684 | K08819 | - | csv:101217952 | 1073.54 |