Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0719 ATGCATAATACTTCTTCTTCAATTCATCCCCATTTCCTTCAATTCCCTCCTCACCACCGCCTCTGTCATATAGTATGCTTCAAGAAGCTTCAACAAAACCTGAGGGAGAACTTGAAGTTAGCTTTGGTTATAAATGCAATGCCTGGACTTCCAAGGATCAGCAGTTTCTCTTGCTTATCTGGTGCTGCATTGAGTGCTAATGCTACCCTAGCGAACACAAATATATGCAATGGGTTGATAGGAGAAGAAATTCTGCCGACCTGGGACTCTCCTAACTCCTTCCGTAAGGTTCCCTCATCACCTACTCTTTCAAGGTTGGATATATTGTCAACATCTCTGCAGAGTAGTCTTTCAAACTTAAGTTGCAGTCCATCTACCCCAACGTCTGAATATGATTCATACTTGTTGAAATCCATGAGTGCTCCATACGGAAGTGAAGGTTTCCTTAATGTTAAGGAAGTGCAAGTGGCAGGTGGAGCTGCCGGTGAGGACAGGGTTCAAGCTGTTTGTTCTGAAGAAAATGGATGGCTATTTTGTGCAATTTATGATGGTTTTAATGGAAGAGATGCAGCTGATTTTCTTGCTGGCACATTGTACGAAACCATTGTATTTCATTTTAACCTACTAGATTGGGAAGCTAAGAATGAAACCTCCGACCGTATGGATATGGATAATTCACATCTTCTTGATGATAGTAGCATTACTCAAGGAAGATTTTCTCCTTTCGGAAACAACAGTAAAATTGCTTCAGATATCCCCAATTTATTAGAGAACCATTCATATTCCAAAGCAGGAATGACAAACTGTTCTCTAAGGCATGGCGTGTTCGATAGCCTCCAGCGTGCGCTCAGTCAAACAGAGAATGATTTTCTGCACATGGTTGAACAGGAAATGGAAGATCGTCCTGATTTAGTTTCTGTTGGGTCATGTGTTTTAGTTGTTCTTCTTCATGGAAAGGATTTGTACACGCTAAATTTGGGTGATAGTAGAGCAGTACTAGCTACCCTTGATGAGGGTGCTATGAGAGGGAATGGGGGACTGAAAGCTGTCCAGCTCACTGAGAGTCACACTGTGGATAATGAACTTGAAAGAGCACAGTTACAACATGATCATCCTGATGATCCGGCAATCATAGTTGGTGGGAAAGTCAAAGGAAAACTGAAGGTGACTCGTGCATTTGGAGTTGGCTACTTGAAGACGAAAAAATTTAATGATGCTTTGATGGGTATTCTTCGAGTCCGTAACCTAATAAGCCCTCCCTATATTTCCACTCAACCGGCAATGTCTATCCATAGGATATCAAAATCAGATTGCTTTGTTATAGTTGGAAGTGATGGTTTATTTGACTTTTTTGGCAATGAGGAGGCAGTGAACCTTGTCCATTCATATATCTTGAGCAACCCAACTGGCGATCCTGCAAAATTTTTACTGGAGCAGCTCCTATTGAAAGCAGCTGATTGCGCAGGTTTTAGCAAGGAAGAATTAATTACCATTCCAGCCGGCAGGAGAAGGAAATATCATGATGATGTAACTGTTATTGTAATCATCCTTGGAACAAATCAGCGCACCACAAGGGCATCTACTAGCATGTAA 1593 41.62 MHNTSSSIHPHFLQFPPHHRLCHIVCFKKLQQNLRENLKLALVINAMPGLPRISSFSCLSGAALSANATLANTNICNGLIGEEILPTWDSPNSFRKVPSSPTLSRLDILSTSLQSSLSNLSCSPSTPTSEYDSYLLKSMSAPYGSEGFLNVKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIVFHFNLLDWEAKNETSDRMDMDNSHLLDDSSITQGRFSPFGNNSKIASDIPNLLENHSYSKAGMTNCSLRHGVFDSLQRALSQTENDFLHMVEQEMEDRPDLVSVGSCVLVVLLHGKDLYTLNLGDSRAVLATLDEGAMRGNGGLKAVQLTESHTVDNELERAQLQHDHPDDPAIIVGGKVKGKLKVTRAFGVGYLKTKKFNDALMGILRVRNLISPPYISTQPAMSIHRISKSDCFVIVGSDGLFDFFGNEEAVNLVHSYILSNPTGDPAKFLLEQLLLKAADCAGFSKEELITIPAGRRRKYHDDVTVIVIILGTNQRTTRASTSM 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5934039 5938535 - CePI673135_05g007190.1 Cec05g0719 202522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0719 530 SUPERFAMILY PP2C-like 162 518 IPR036457 -
Cec05g0719 530 CDD PP2Cc 161 517 IPR001932 -
Cec05g0719 530 Gene3D - 128 526 IPR036457 -
Cec05g0719 530 ProSiteProfiles PPM-type phosphatase domain profile. 148 517 IPR001932 -
Cec05g0719 530 SMART PP2C_4 139 515 IPR001932 -
Cec05g0719 530 Pfam Protein phosphatase 2C 280 468 IPR001932 -
Cec05g0719 530 PANTHER PROTEIN PHOSPHATASE 2C 157 515 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2125 Cec-Chr2:38810974 Cec05g0719 Cec-Chr5:5934039 1.90E-62 dispersed
Cec05g0719 Cec-Chr5:5934039 Cec10g0188 Cec-Chr10:1847266 1.30E-58 dispersed
Cec05g0719 Cec-Chr5:5934039 Cec04g0954 Cec-Chr4:29233427 6.50E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0719 - - - 0.0