Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g0789 | ATGGAAAAGAAATTTGAAGACTCACTGATGGGGTTTGATAATTCTGCTGGATTTTACTCTCCGGCCGTGTTTCCCGATGAGTTTCCGGCGTCGAATTTTGATTCTTTTTCCAGTATTTTCGACATGCCATGTGATGACCATAAAGCTTCTGCTGCTGCTTCTTGTTCTTCTAATTCCTTTGACTTATTTAGTAGTGGAATTGAAATCCATGATTTTTACAATATTAATAATAATGATAATAATAATAATAATATTCCTTCTTCTTCTTCTTCTAATTTCTTCGATTTGCTTTCTACGGCGGCTCCGCCTCTTTCCTCACCGGCCTCCACCGTGCCGGAGTCCTCCGAGGTTCTTAATGCTCCACCCACTCCTAATTCTTCCTCTGTTTCTTCCTCCTCCAATGAAGCTACAGCTGCCATTCAAGAAGTTGACAAGATCAACAACAACACTGAGAAGCCTTCTTCTTCTAAAGTGTTGAAGCCAAAAAAGAAGAACCAGAAGAAGCAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATTGATAATCTCGACGACGGTTACCGATGGCGAAAGTACGGACAAAAAGCAGTGAAGAACAGTCCTTACCCCAGAAGCTATTATCGTTGTACGACGGCAGGGTGCGATGTGAAGAAGAGAGTAGAACGATCGTCCGGCGACCATTCGATAGTTGTTACGACGTACGAAGGTCAACACACTCACCAAAGTCCGGTAATGCCGCGAGGAAGTATCAGAGTTTTACCAGAATCCACCAACAACGGTCTCATCGCCGATCACGACACCACCGCCACTGGACTTTTATTCCAACCCAACACTCCCCAACCCTTCATGTGTAGTTCTCCGCCGCCGCCATTTCTAACGATCAACTCGTCGGTGGCGGCGGGAAGTTCCCGTCCTGCTCCTCCTCCTACTTCCTTCCCGCCACCACCGTCTCAAGCTTCTTTGGTCCGAGACCATGGGCTTTTGCAGGACTTGGTGCCATTGCAAATGAGGAAGGAACCAAAAGATGAGCAAAATGGATGA | 1047 | 45.75 | MEKKFEDSLMGFDNSAGFYSPAVFPDEFPASNFDSFSSIFDMPCDDHKASAAASCSSNSFDLFSSGIEIHDFYNINNNDNNNNNIPSSSSSNFFDLLSTAAPPLSSPASTVPESSEVLNAPPTPNSSSVSSSSNEATAAIQEVDKINNNTEKPSSSKVLKPKKKNQKKQREPRFAFMTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCDVKKRVERSSGDHSIVVTTYEGQHTHQSPVMPRGSIRVLPESTNNGLIADHDTTATGLLFQPNTPQPFMCSSPPPPFLTINSSVAAGSSRPAPPPTSFPPPPSQASLVRDHGLLQDLVPLQMRKEPKDEQNG | 348 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 6576135 | 6577687 | + | CePI673135_05g007890.1 | Cec05g0789 | 202592 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g0789 | 348 | MobiDBLite | consensus disorder prediction | 104 | 155 | - | - | |
Cec05g0789 | 348 | ProSiteProfiles | WRKY domain profile. | 180 | 245 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec05g0789 | 348 | Pfam | WRKY DNA -binding domain | 186 | 243 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec05g0789 | 348 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 104 | 256 | IPR044810 | GO:0003700(InterPro) | |
Cec05g0789 | 348 | SUPERFAMILY | WRKY DNA-binding domain | 177 | 245 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec05g0789 | 348 | Gene3D | WRKY domain | 170 | 246 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec05g0789 | 348 | MobiDBLite | consensus disorder prediction | 104 | 174 | - | - | |
Cec05g0789 | 348 | MobiDBLite | consensus disorder prediction | 295 | 323 | - | - | |
Cec05g0789 | 348 | FunFam | WRKY transcription factor 57 | 171 | 245 | - | - | |
Cec05g0789 | 348 | SMART | WRKY_cls | 185 | 244 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0789 | Cec-Chr5:6576135 | Cec10g1167 | Cec-Chr10:25499238 | 1.30E-35 | dispersed | |
Cec05g0789 | Cec-Chr5:6576135 | Cec06g0447 | Cec-Chr6:5039065 | 9.20E-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29538 | PF03106 | WRKY | 9.20E-26 | CL0274 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g0789 | - | - | - | 0.0 |