Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0789 ATGGAAAAGAAATTTGAAGACTCACTGATGGGGTTTGATAATTCTGCTGGATTTTACTCTCCGGCCGTGTTTCCCGATGAGTTTCCGGCGTCGAATTTTGATTCTTTTTCCAGTATTTTCGACATGCCATGTGATGACCATAAAGCTTCTGCTGCTGCTTCTTGTTCTTCTAATTCCTTTGACTTATTTAGTAGTGGAATTGAAATCCATGATTTTTACAATATTAATAATAATGATAATAATAATAATAATATTCCTTCTTCTTCTTCTTCTAATTTCTTCGATTTGCTTTCTACGGCGGCTCCGCCTCTTTCCTCACCGGCCTCCACCGTGCCGGAGTCCTCCGAGGTTCTTAATGCTCCACCCACTCCTAATTCTTCCTCTGTTTCTTCCTCCTCCAATGAAGCTACAGCTGCCATTCAAGAAGTTGACAAGATCAACAACAACACTGAGAAGCCTTCTTCTTCTAAAGTGTTGAAGCCAAAAAAGAAGAACCAGAAGAAGCAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATTGATAATCTCGACGACGGTTACCGATGGCGAAAGTACGGACAAAAAGCAGTGAAGAACAGTCCTTACCCCAGAAGCTATTATCGTTGTACGACGGCAGGGTGCGATGTGAAGAAGAGAGTAGAACGATCGTCCGGCGACCATTCGATAGTTGTTACGACGTACGAAGGTCAACACACTCACCAAAGTCCGGTAATGCCGCGAGGAAGTATCAGAGTTTTACCAGAATCCACCAACAACGGTCTCATCGCCGATCACGACACCACCGCCACTGGACTTTTATTCCAACCCAACACTCCCCAACCCTTCATGTGTAGTTCTCCGCCGCCGCCATTTCTAACGATCAACTCGTCGGTGGCGGCGGGAAGTTCCCGTCCTGCTCCTCCTCCTACTTCCTTCCCGCCACCACCGTCTCAAGCTTCTTTGGTCCGAGACCATGGGCTTTTGCAGGACTTGGTGCCATTGCAAATGAGGAAGGAACCAAAAGATGAGCAAAATGGATGA 1047 45.75 MEKKFEDSLMGFDNSAGFYSPAVFPDEFPASNFDSFSSIFDMPCDDHKASAAASCSSNSFDLFSSGIEIHDFYNINNNDNNNNNIPSSSSSNFFDLLSTAAPPLSSPASTVPESSEVLNAPPTPNSSSVSSSSNEATAAIQEVDKINNNTEKPSSSKVLKPKKKNQKKQREPRFAFMTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCDVKKRVERSSGDHSIVVTTYEGQHTHQSPVMPRGSIRVLPESTNNGLIADHDTTATGLLFQPNTPQPFMCSSPPPPFLTINSSVAAGSSRPAPPPTSFPPPPSQASLVRDHGLLQDLVPLQMRKEPKDEQNG 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6576135 6577687 + CePI673135_05g007890.1 Cec05g0789 202592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0789 348 MobiDBLite consensus disorder prediction 104 155 - -
Cec05g0789 348 ProSiteProfiles WRKY domain profile. 180 245 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g0789 348 Pfam WRKY DNA -binding domain 186 243 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g0789 348 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 104 256 IPR044810 GO:0003700(InterPro)
Cec05g0789 348 SUPERFAMILY WRKY DNA-binding domain 177 245 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g0789 348 Gene3D WRKY domain 170 246 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g0789 348 MobiDBLite consensus disorder prediction 104 174 - -
Cec05g0789 348 MobiDBLite consensus disorder prediction 295 323 - -
Cec05g0789 348 FunFam WRKY transcription factor 57 171 245 - -
Cec05g0789 348 SMART WRKY_cls 185 244 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0789 Cec-Chr5:6576135 Cec10g1167 Cec-Chr10:25499238 1.30E-35 dispersed
Cec05g0789 Cec-Chr5:6576135 Cec06g0447 Cec-Chr6:5039065 9.20E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29538 PF03106 WRKY 9.20E-26 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0789 - - - 0.0