Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0805 ATGGCTCTCGACGCCGAAGCTGCACCAGCGGCGGAGTTGGCGCTTGCTGATACCGACATCAACTGGAACAGGTTGGACAAGACAAAGTTTCATATAATTGGGGCAATACTCTTTACGGCTCAGTCAGCCTTGTTACATCCAACAGCGGTTGTAAAAACTAGAATGCAAGTTGCTGGGTCTGGTCTATCTCACATGCGTGGACTGTCAGTTTTCTGGAATATATTGAAGTCTGATGGAATCTCTGGCTTGTATAGAGGTTTTGGTACTTCAGCGATTGGATCATTACCTGGTAGAGTATTGGCTTTAACATCACTAGAAGTATCAAAAGACATGATGTTGAAATATACTGGAAATTTGGAGATGTATGAAGCAACACGTGTTGGTCTTGCTAATGGAGTGGCAGGCATGATCTCGAATTTAGTTTCATGCATATACTATGTGCCATTGGACGTGACTTGCCAGAGGCTGATGGTTCAAGGGCTTCCTGGAACCACCTTCTGCAATGGCCCACTTGATGTTGTCAGAAAAGTGATGAAGGCTGAAGGATTTCGTGGTTTATATAGGGGTTTTGGATTAACGGCTGTAACTCAGTCCCCAGCATCTGCTCTCTGGTGGGGTGTTTATGGTGCTGCTCAGCATATTATCTGGAGGAGCTTAGGATATCAAGATAGCATGGAGAAGAAACCTTCTCACGTGGAGATGGTGACGGTTCAGGCCACAGCAGGAATGGTGGCAGGTGCTTGTTCCTCTGTTATTACAACTCCCGTAGACACAGTAAAGACGCGACTTCAGGTCATCGATAACTATGGAATTGGAAGACCATCCGTGCTCAAGACTTCAAGAGCACTTCTCAAGGAAGATGGATGGTTGGGATTTTATAGAGGCTTTGGACCTCGGTTTTTGAATATGTCAATTTATGGAACCACGATGATAGTCACTTATGAACTGATCAAGAGACTTTCCTTAAAGGACATCGTGACATCTTGA 987 44.88 MALDAEAAPAAELALADTDINWNRLDKTKFHIIGAILFTAQSALLHPTAVVKTRMQVAGSGLSHMRGLSVFWNILKSDGISGLYRGFGTSAIGSLPGRVLALTSLEVSKDMMLKYTGNLEMYEATRVGLANGVAGMISNLVSCIYYVPLDVTCQRLMVQGLPGTTFCNGPLDVVRKVMKAEGFRGLYRGFGLTAVTQSPASALWWGVYGAAQHIIWRSLGYQDSMEKKPSHVEMVTVQATAGMVAGACSSVITTPVDTVKTRLQVIDNYGIGRPSVLKTSRALLKEDGWLGFYRGFGPRFLNMSIYGTTMIVTYELIKRLSLKDIVTS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6795491 6798706 + CePI673135_05g008050.1 Cec05g0805 202608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0805 328 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 324 - -
Cec05g0805 328 Gene3D Mitochondrial carrier domain 119 324 IPR023395 -
Cec05g0805 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 111 IPR018108 -
Cec05g0805 328 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Cec05g0805 328 Pfam Mitochondrial carrier protein 237 322 IPR018108 -
Cec05g0805 328 Pfam Mitochondrial carrier protein 32 115 IPR018108 -
Cec05g0805 328 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Cec05g0805 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Cec05g0805 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0805 Cec-Chr5:6795491 Cec11g0505 Cec-Chr11:5353691 2.60E-86 dispersed
Cec05g0805 Cec-Chr5:6795491 Cec09g0081 Cec-Chr9:712596 1.10E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0805 K15121 - csv:101213375 615.535