Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0847 ATGGAGGACGATTTCGAGTTCCCGTCTGCAAGCAATGTAGACGAGGAAATGGGCTTGCCTGAGGACGAAGCGGAGAGCTCAGTTCTGAAGGTTGGCGAAGAGAAGGAGATTGGAAAGAATGGGCTGAAGAAGAAACTTGTTAAAGAAGGCGAAGGATGGGAAACTCCCGAGACTGGTGATGAAGTCGAAGTGCATTATACGGGAACCCTTCTTGATGGAACTCAATTCGATTCGAGCCGTGACCGAGGAACGCCCTTCAAGTTCAAGCTCGGGGAAGGGCAAGTGATTAAAGGATGGGATGAAGGTATTAGAACAATGAAAAAGGGTGAACGTGCAGTTTTCACGATACCTCCTGAATTGGCCTATGGAGAGTCCGGCTCTCCTCCAACAATTCCACCGAATGCTACTCTTCAATTTGATGTTGAGCTACTTTCATGGCACAGCGTCAAAGACATCTGCCAAGATGGAGGAATCTTGAAAAAGATCCTTGTTAAAGGAGACGGCTGGGACAAACCGAAGGACTTGGACGAAGTCTCGGTTCTTTATGAGGCTCGTCTTGAAGATGGTACACTGATCTCAAAGTCTGATGGGGCCGAATTCACTGTTGAAAATGGGTACTTCTGTCCTGCCTTGGCAACGTCCGTGAAGACCATGAAGAAGGGAGAGAAAGCTTTGTTGACTGTGAGGCCACAATATGCATTTGGGGAGTCTGGTAGGCCTGGAGCTGGAGAAGAAGGTGCTGTGCCTCCAAATGCCACACTTCAGATAACCCTTCAATTGGTTTCTTGGAAAACTGTTACAGAGGTTACTAAGGATAAGAAGGTCCTGAAGAAGACCCAGAAGGAGGGAGAAGGATATGAACAGCCAAATGAGGGAGCAGTGGTGCAAGTGAAACTAACCGGTAAACTGGCCGATGGGACGATTTTTACGAAAAAGGGTGATGATGAGAAGCCATTTGAGTTCAAAACTGACGAAGAACAAGTCATTGAAGGACTTGACTTGGCTGTGAGAAAGATGAAGAAGGGAGAAATTGCCTTGGTGACCATCCATCCACAATATGCTTTTGGATCTTCTGATTCACCCCAAGATCTAGCTGTGGTTCCTGCAAACTCAACTGTATATTATGAAGTTGAGCTAGTTTCTTTCGTCAAAGAAAAAGAATCTTGGGATCTGAACACAGCAGAAGAGAAAATAGAAGCAGCAGGTAAAAAGAAGGAAGAAGGAAATATTTTGTTCAAAGCTGGAAAATATGATAGAGCATCAAGGAGATATGAAAAGGCTGTGCGCTACATTGAATACGATACTTCTTTCAGCGATGAAGAGAAGCAACAGAGCAAGGCACTGAAGATTTCGTGCAACCTCAACAATGCTGCGTGCAAATTGAAAGTCAAAGATTACAAGCAAGCAGAGAAGCTCTGTACAAAGGTGTTGGAACTTGACAGTCGGAACGTGAAAGCTCTCTATAGAAGGGCCCAGGCATATATTCAACTTGTTGATCTTGATCTTGCTGAGCAGGATATCAAAAAAGCCCTTGAGATAGACCCAGATAACAGGGAAGTGAAGATGGAATACAGACAGTTGAAAGAGAAAGTGAGGGAATACAACAAGAGAGATGCACAGTTCTATGGCAACATATTTGCAAAAATGAACAAGCTGGAGCAGGCGAAGTCTGCTAATTCAGCAGGGAAGCAGGAGGCAGTGCCAATGACCATTGATAGCAAAGCTTAG 1728 44.97 MEDDFEFPSASNVDEEMGLPEDEAESSVLKVGEEKEIGKNGLKKKLVKEGEGWETPETGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFKLGEGQVIKGWDEGIRTMKKGERAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDICQDGGILKKILVKGDGWDKPKDLDEVSVLYEARLEDGTLISKSDGAEFTVENGYFCPALATSVKTMKKGEKALLTVRPQYAFGESGRPGAGEEGAVPPNATLQITLQLVSWKTVTEVTKDKKVLKKTQKEGEGYEQPNEGAVVQVKLTGKLADGTIFTKKGDDEKPFEFKTDEEQVIEGLDLAVRKMKKGEIALVTIHPQYAFGSSDSPQDLAVVPANSTVYYEVELVSFVKEKESWDLNTAEEKIEAAGKKKEEGNILFKAGKYDRASRRYEKAVRYIEYDTSFSDEEKQQSKALKISCNLNNAACKLKVKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIQLVDLDLAEQDIKKALEIDPDNREVKMEYRQLKEKVREYNKRDAQFYGNIFAKMNKLEQAKSANSAGKQEAVPMTIDSKA 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7152297 7155905 + CePI673135_05g008470.1 Cec05g0847 202650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0847 575 Gene3D - 31 150 IPR046357 GO:0003755(InterPro)
Cec05g0847 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 383 IPR001179 GO:0003755(InterPro)
Cec05g0847 575 SUPERFAMILY FKBP-like 28 151 - -
Cec05g0847 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 59 147 IPR001179 GO:0003755(InterPro)
Cec05g0847 575 Coils Coil 517 537 - -
Cec05g0847 575 SMART tpr_5 401 434 IPR019734 GO:0005515(InterPro)
Cec05g0847 575 SMART tpr_5 450 483 IPR019734 GO:0005515(InterPro)
Cec05g0847 575 SMART tpr_5 484 517 IPR019734 GO:0005515(InterPro)
Cec05g0847 575 Pfam Tetratricopeptide repeat 463 525 - -
Cec05g0847 575 MobiDBLite consensus disorder prediction 1 34 - -
Cec05g0847 575 FunFam Peptidylprolyl isomerase 32 150 - -
Cec05g0847 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 175 264 IPR001179 GO:0003755(InterPro)
Cec05g0847 575 Gene3D - 265 389 IPR046357 GO:0003755(InterPro)
Cec05g0847 575 FunFam Peptidylprolyl isomerase 388 544 - -
Cec05g0847 575 Gene3D - 151 264 IPR046357 GO:0003755(InterPro)
Cec05g0847 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 170 260 IPR001179 GO:0003755(InterPro)
Cec05g0847 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 53 144 IPR001179 GO:0003755(InterPro)
Cec05g0847 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 286 380 IPR001179 GO:0003755(InterPro)
Cec05g0847 575 SUPERFAMILY TPR-like 396 550 IPR011990 GO:0005515(InterPro)
Cec05g0847 575 MobiDBLite consensus disorder prediction 1 22 - -
Cec05g0847 575 PANTHER PEPTIDYLPROLYL ISOMERASE 25 145 IPR050754 -
Cec05g0847 575 SUPERFAMILY FKBP-like 151 267 - -
Cec05g0847 575 SUPERFAMILY FKBP-like 269 399 - -
Cec05g0847 575 Gene3D Tetratricopeptide repeat domain 390 544 IPR011990 GO:0005515(InterPro)
Cec05g0847 575 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515(InterPro)
Cec05g0847 575 FunFam Peptidylprolyl isomerase 265 385 - -
Cec05g0847 575 FunFam Peptidylprolyl isomerase 151 264 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2528 Cec-Chr2:42340776 Cec05g0847 Cec-Chr5:7152297 7.00E-13 dispersed
Cec04g0891 Cec-Chr4:28638520 Cec05g0847 Cec-Chr5:7152297 2.70E-64 dispersed
Cec05g0847 Cec-Chr5:7152297 Cec09g0833 Cec-Chr9:7738915 4.50E-243 dispersed
Cec05g0847 Cec-Chr5:7152297 Cec05g0894 Cec-Chr5:7731468 6.20E-19 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0847 K09571 - csv:101210041 1040.02