Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g0855 | ATGGAGAAGGACAAACCCCAAGGCTATTCTGGTGGATTTCCGCCACCATCAAGTCGTTACTCAGGTCTTTCACCAACTGGAAGCATTTTCAATGGAAAATCTGAGGCAACTTCATCTTCAATGTTGCTTCCTCCGATGCCTTCGGGTGCTCTTTCTGATTCAGGTCAATTTGGTCATGCAAGGCCCACTGATTCTAATCGGTTCAGCCATGATATTAGTCAAATGCCTGATAACCCACCGAGAAATATTGGTCACAGACGTGCCCATTCAGAAATCCTGACCCTTCCTGATGATATTTGTTTTGACAATGACCTTGGTGTCATTGGTAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCGACTGCCACCTCCACAATACAAGTTGGTGAGTCATCTTCTGCTGTTGGAGATGCAATATCAACTCCTACTCCAACAATTGGAGCAGCAACCTCTAAAGATGATACTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACACCAGCATAGCCAGTCCATGGATGGCTTGACAACCATAAAGCCTGAGATGCTTGTCTCAGGGTCTGAAGAAGCCTCTGCAGCCGATTCCAAGAAAGCCATGTCAGCTACAAAGCTCGCTGAGCTTGCGCTTATTGACCCCAAACGTGCTAAGAGGATATGGGCAAATCGACAGTCGGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAGACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTTCTGCTGAGAACAATGAATTAAAGCTGCGGTTGCAGACAATGGAGCAGCAGGTTCACCTGCAAGATGCTCTTAATGAAGCACTCAAAGAGGAAATTCAGCATTTGAAAGTTTTGACCGGCCAAGCAATCCCAAATGGTGGATCAGTTACAAACTTTGCTTCCTTTGGAGCTGGCCAACCATTTTACCCAAATAATCAAGCAATGCACACTTTGTTAACTGCTCAGCAGTTTCAACAACTTCAAATCCACTCCCAGCACCAGCAGCAACAACAACAACATTACCAGTACCATCAGCTGCATCAGCTTCATCAACAGCCAACTGGAGACAACAAATCGAAAGGATCGACTTCTTCTCTGAGTCCAAAAGACAACACATCAGATACATCCTCTCCCACTTGTTGA | 1257 | 45.35 | MEKDKPQGYSGGFPPPSSRYSGLSPTGSIFNGKSEATSSSMLLPPMPSGALSDSGQFGHARPTDSNRFSHDISQMPDNPPRNIGHRRAHSEILTLPDDICFDNDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSTATSTIQVGESSSAVGDAISTPTPTIGAATSKDDTAVGLKERPRVRHQHSQSMDGLTTIKPEMLVSGSEEASAADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLSAENNELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQAIPNGGSVTNFASFGAGQPFYPNNQAMHTLLTAQQFQQLQIHSQHQQQQQQHYQYHQLHQLHQQPTGDNKSKGSTSSLSPKDNTSDTSSPTC | 418 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 7241221 | 7244908 | - | CePI673135_05g008550.1 | Cec05g0855 | 202658 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g0855 | 418 | MobiDBLite | consensus disorder prediction | 58 | 76 | - | - | |
Cec05g0855 | 418 | Pfam | bZIP transcription factor | 231 | 285 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec05g0855 | 418 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 229 | 292 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec05g0855 | 418 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 69 | 395 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cec05g0855 | 418 | MobiDBLite | consensus disorder prediction | 386 | 418 | - | - | |
Cec05g0855 | 418 | MobiDBLite | consensus disorder prediction | 1 | 83 | - | - | |
Cec05g0855 | 418 | SUPERFAMILY | Leucine zipper domain | 231 | 282 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec05g0855 | 418 | MobiDBLite | consensus disorder prediction | 17 | 45 | - | - | |
Cec05g0855 | 418 | FunFam | probable transcription factor PosF21 | 230 | 283 | - | - | |
Cec05g0855 | 418 | Gene3D | - | 230 | 283 | - | - | |
Cec05g0855 | 418 | CDD | bZIP_plant_RF2 | 232 | 281 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cec05g0855 | 418 | Coils | Coil | 247 | 316 | - | - | |
Cec05g0855 | 418 | SMART | brlzneu | 227 | 291 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0855 | Cec-Chr5:7241221 | Cec07g0571 | Cec-Chr7:7129831 | 8.50E-50 | dispersed | |
Cec05g0855 | Cec-Chr5:7241221 | Cec05g0858 | Cec-Chr5:7275556 | 1.80E-153 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29543 | PF00170 | bZIP_1 | 1.90E-08 | CL0018 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g0855 | - | - | - | 0.0 |