Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0855 ATGGAGAAGGACAAACCCCAAGGCTATTCTGGTGGATTTCCGCCACCATCAAGTCGTTACTCAGGTCTTTCACCAACTGGAAGCATTTTCAATGGAAAATCTGAGGCAACTTCATCTTCAATGTTGCTTCCTCCGATGCCTTCGGGTGCTCTTTCTGATTCAGGTCAATTTGGTCATGCAAGGCCCACTGATTCTAATCGGTTCAGCCATGATATTAGTCAAATGCCTGATAACCCACCGAGAAATATTGGTCACAGACGTGCCCATTCAGAAATCCTGACCCTTCCTGATGATATTTGTTTTGACAATGACCTTGGTGTCATTGGTAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCGACTGCCACCTCCACAATACAAGTTGGTGAGTCATCTTCTGCTGTTGGAGATGCAATATCAACTCCTACTCCAACAATTGGAGCAGCAACCTCTAAAGATGATACTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACACCAGCATAGCCAGTCCATGGATGGCTTGACAACCATAAAGCCTGAGATGCTTGTCTCAGGGTCTGAAGAAGCCTCTGCAGCCGATTCCAAGAAAGCCATGTCAGCTACAAAGCTCGCTGAGCTTGCGCTTATTGACCCCAAACGTGCTAAGAGGATATGGGCAAATCGACAGTCGGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAGACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTTCTGCTGAGAACAATGAATTAAAGCTGCGGTTGCAGACAATGGAGCAGCAGGTTCACCTGCAAGATGCTCTTAATGAAGCACTCAAAGAGGAAATTCAGCATTTGAAAGTTTTGACCGGCCAAGCAATCCCAAATGGTGGATCAGTTACAAACTTTGCTTCCTTTGGAGCTGGCCAACCATTTTACCCAAATAATCAAGCAATGCACACTTTGTTAACTGCTCAGCAGTTTCAACAACTTCAAATCCACTCCCAGCACCAGCAGCAACAACAACAACATTACCAGTACCATCAGCTGCATCAGCTTCATCAACAGCCAACTGGAGACAACAAATCGAAAGGATCGACTTCTTCTCTGAGTCCAAAAGACAACACATCAGATACATCCTCTCCCACTTGTTGA 1257 45.35 MEKDKPQGYSGGFPPPSSRYSGLSPTGSIFNGKSEATSSSMLLPPMPSGALSDSGQFGHARPTDSNRFSHDISQMPDNPPRNIGHRRAHSEILTLPDDICFDNDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSTATSTIQVGESSSAVGDAISTPTPTIGAATSKDDTAVGLKERPRVRHQHSQSMDGLTTIKPEMLVSGSEEASAADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLSAENNELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQAIPNGGSVTNFASFGAGQPFYPNNQAMHTLLTAQQFQQLQIHSQHQQQQQQHYQYHQLHQLHQQPTGDNKSKGSTSSLSPKDNTSDTSSPTC 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7241221 7244908 - CePI673135_05g008550.1 Cec05g0855 202658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0855 418 MobiDBLite consensus disorder prediction 58 76 - -
Cec05g0855 418 Pfam bZIP transcription factor 231 285 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec05g0855 418 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 229 292 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec05g0855 418 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 69 395 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cec05g0855 418 MobiDBLite consensus disorder prediction 386 418 - -
Cec05g0855 418 MobiDBLite consensus disorder prediction 1 83 - -
Cec05g0855 418 SUPERFAMILY Leucine zipper domain 231 282 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec05g0855 418 MobiDBLite consensus disorder prediction 17 45 - -
Cec05g0855 418 FunFam probable transcription factor PosF21 230 283 - -
Cec05g0855 418 Gene3D - 230 283 - -
Cec05g0855 418 CDD bZIP_plant_RF2 232 281 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec05g0855 418 Coils Coil 247 316 - -
Cec05g0855 418 SMART brlzneu 227 291 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0855 Cec-Chr5:7241221 Cec07g0571 Cec-Chr7:7129831 8.50E-50 dispersed
Cec05g0855 Cec-Chr5:7241221 Cec05g0858 Cec-Chr5:7275556 1.80E-153 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29543 PF00170 bZIP_1 1.90E-08 CL0018 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0855 - - - 0.0