Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g0879 | ATGACTGAGTTCAAGAAAATGGTGATCCAATTTGCCATGGAAAGAGCTCTGAATGCTGAGAGTTACACGAAAGATGTCGGCTCCAAGTGCCGAAACGGGAAGGAAAAGGCAGCTTGGGCTGATTGTTTAAAGCTTTACCAAAACACCATCCTTCAACTCAACCAAACTTTAGATTCCTCTACTAGCTGTACTGATTTCGATATCCAAACCTGGCTCAGTACTGCCTTAACCAACCTCGAAACATGTCGAACCGGGTTCGCCGAGCTTAATGTTTCAGACTATATATTACCGATGATCATGTCGAACAATGTCACAAGGCTAATAAGCAACAGTTTGGCTATTAACAATGCTTCAGGAGGTGGGGTATTGGGGAAGGAAACATATAAAAAGGGTTTTCCAAGTTGGGTTTCAGGTGGTGATAGGAGGTTATTGCAGTCGTCGTCGTCATCATCTTCAATAAAGGCGGACATTGTGGTGGCTCAGGACGGGTCTGGTAATTATACGACGGTCGGAGCTGCGGTAGAGGAAGCTGGGAAAAGGAAGGGAAATGGGAGATTTGTTATACAAGTAAAGAGAGGGGTTTATGAAGAAAATGTGGAGATAGGAAGTAAGATGAAGAATATAATGTTGATTGGAGATGGAATGAGATTTACTTTCATTACTGGAAATAGAAGTGTTGGAGGAGGCTCCACCACTTTCAATTCTGCTACTGTTGCGGTGACTGGTGAAGGATTTATAGCTCGAGGCATCACATTCCGAAACACCGCAGGTCCTGAAAACCATCAAGCAGTAGCTGTCCGGTCAGGCGCGGATCTTTCGGTTTTCTACCGTTGTGCATTTGAAGGATATCAAGACACCCTCTACGTGCATTCACAAAGACAATTCTATAAAGAGTGTTATATTTACGGTACAGTAGATTTCATATTTGGAAATGGTGCAGTTGTTGTACAAAACTGCATGATTTACGCAAGGAAGCCAATGAATGGTCAGAAAAATGCAGTGACCGCTCAAGGACGAACTGACCCAAATCAAAACACTGGCATTTCAATTCACAATTCACGAGTGATGGCTACAGATGATTTGAAAGCAGTGGAGAGCAGAGTGAAAACTTACTTAGGAAGGCCATGGAAGGAGTATTCTCGAACAGTTTTCATGAAAACTTACCTTGATAATTTGGTTGATCCAGTGGGTTGGTTGGAATGGGATGGTGAATTTGCACTTCATACTTTATATTATGGAGAGTATAAGAATATTGGTCCTCGTTCATCCACTACTCAGCGAGTGAATTGGAAAGGCTATCGTGTTATAACCAATGAAACTGAGGCATCAGAGTTTAGTGTCCAAAATTTCATTGCTGGCCAGTCTTGGTTGCCGGATACAGAGGTCCCATTCACTCCTGGACTTTAG | 1407 | 42.79 | MTEFKKMVIQFAMERALNAESYTKDVGSKCRNGKEKAAWADCLKLYQNTILQLNQTLDSSTSCTDFDIQTWLSTALTNLETCRTGFAELNVSDYILPMIMSNNVTRLISNSLAINNASGGGVLGKETYKKGFPSWVSGGDRRLLQSSSSSSSIKADIVVAQDGSGNYTTVGAAVEEAGKRKGNGRFVIQVKRGVYEENVEIGSKMKNIMLIGDGMRFTFITGNRSVGGGSTTFNSATVAVTGEGFIARGITFRNTAGPENHQAVAVRSGADLSVFYRCAFEGYQDTLYVHSQRQFYKECYIYGTVDFIFGNGAVVVQNCMIYARKPMNGQKNAVTAQGRTDPNQNTGISIHNSRVMATDDLKAVESRVKTYLGRPWKEYSRTVFMKTYLDNLVDPVGWLEWDGEFALHTLYYGEYKNIGPRSSTTQRVNWKGYRVITNETEASEFSVQNFIAGQSWLPDTEVPFTPGL | 468 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 7607139 | 7609791 | - | CePI673135_05g008790.1 | Cec05g0879 | 202682 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g0879 | 468 | Pfam | Plant invertase/pectin methylesterase inhibitor | 4 | 114 | IPR006501 | GO:0004857(InterPro) | |
Cec05g0879 | 468 | Pfam | Pectinesterase | 156 | 453 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Cec05g0879 | 468 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 3 | 116 | IPR035513 | - | |
Cec05g0879 | 468 | Gene3D | - | 149 | 468 | IPR012334 | - | |
Cec05g0879 | 468 | SMART | PMEI_2 | 1 | 114 | IPR006501 | GO:0004857(InterPro) | |
Cec05g0879 | 468 | NCBIfam | pectinesterase inhibitor domain | 3 | 116 | IPR006501 | GO:0004857(InterPro) | |
Cec05g0879 | 468 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 1 | 117 | IPR035513 | - | |
Cec05g0879 | 468 | ProSitePatterns | Pectinesterase signature 2. | 301 | 310 | IPR033131 | - | |
Cec05g0879 | 468 | CDD | PMEI-like_3 | 3 | 117 | - | - | |
Cec05g0879 | 468 | FunFam | Pectinesterase | 150 | 468 | - | - | |
Cec05g0879 | 468 | SUPERFAMILY | Pectin lyase-like | 151 | 467 | IPR011050 | - | |
Cec05g0879 | 468 | PANTHER | PECTINESTERASE | 4 | 459 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0477 | Cec-Chr1:4871421 | Cec05g0879 | Cec-Chr5:7607139 | 1.30E-196 | dispersed | |
Cec01g0644 | Cec-Chr1:6986460 | Cec05g0879 | Cec-Chr5:7607139 | 2.80E-127 | dispersed | |
Cec02g0065 | Cec-Chr2:611801 | Cec05g0879 | Cec-Chr5:7607139 | 8.70E-85 | dispersed | |
Cec05g0277 | Cec-Chr5:2278725 | Cec05g0879 | Cec-Chr5:7607139 | 1.30E-107 | dispersed | |
Cec05g0278 | Cec-Chr5:2294046 | Cec05g0879 | Cec-Chr5:7607139 | 1.70E-153 | dispersed | |
Cec05g0879 | Cec-Chr5:7607139 | Cec10g0587 | Cec-Chr10:7643750 | 4.90E-155 | dispersed | |
Cec05g0879 | Cec-Chr5:7607139 | Cec05g0882 | Cec-Chr5:7633724 | 6.40E-06 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g0879 | K01051 | - | csv:101211449 | 852.432 |