Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0913 ATGACGGAGGTTTACACTAGAATGCCAAGCGAAGATGATGAAGATTCGCCGGCCAAATGTCGAGAGCGCCGGCGCCGTAGAATAGAGATGAGACGGTTAGCAACAGTATCGTCGGCGAATCCCTCGCCCTCCACCACTCATCACCACCGGAAAGAGAATCAAACTGGTACCTCCGGTTTTGAGAAGAAGCGTGGTCGGAAGACGGACGGCGACGGTAATCCGGAGATTTCATCGTCTTCGTCATCGGGGGAGGAAGTGAAGACTGTAAGAGCTTCACCATCTGTACCTCAGCCGGTTTTCGGGATGATGTCGGTGTCCGGGAGGTCACGTGAGATGGAGGATGCAGTATCGGTGAGCACGTGCGTTTTAGGTTCAGAAAATTTCCGACGGCAACTCGTGCATTTCTTCGCCGTCTACGATGGACATGGAGGCCCTCACGTGGCAGCGCTTTGTAGGGAGAAGATGCACGTGTTCGTACAAGAGGAATTTTCGCGCGTGATGTGCACGCGCGAGGAAGGTGAGAGTGGCGGCGGTGGAAGCAGCGCGGGGGAGGAGGAGGAGGCGACTTGGAGAAGAGTGATGCAGCGGAGCTTTGAAAGAATGGACGAAATGGCACTCAGTACTTGTGCCTGTGGGAGCGTCGGAGGCCAGTGTGGGTGCCATCCGATGGAGGTGGCTCTCGGCGGCTCCACCGCCGTCGTCGCCGTGCTCACGCCGGATCACATAATCGTCGCCAACTGCGGCGATTCACGCGCTGTCCTTTGCCGAGGAGGAAGGGCCATTCCGCTTTCTAATGATCACAAGCCTGATAGAAATGATGAACTAGCAAGGATTGAAGCAGCTGGAGGACGGGTGATTTTCGTAAATGGAGCTCGGGTTGAAGGAATCCTTGCAATGTCCCGGGCAATAGGAGACAAGTATCTCAAGTCAGTTGTAATATCAGAGCCTGAAATTACGTTTACTAAAAGAGAATCAGATGATGAATGTTTAATACTTGCAAGTGATGGTTTGTGGGATGTTCTTTCAAGTGAATTGGCTTGTGAGGTAGCTCGTGAATGTCTCCAAGAAGGAGCAGCGGCTGCTGCTACTACAATAGACCTCAATGCCACACCTCAAATTGAAGAAGAAGGGGCTGGAACTTCATATCCCTCTCGGAGTGCATTGGCTGCTGCATTGCTTACTCGTCTTGCTTTAGGGCGGAAAAGCACGGACAACATCAGTGTCATAGTTATTGATCTGAAGAGGAGCTGA 1251 52.52 MTEVYTRMPSEDDEDSPAKCRERRRRRIEMRRLATVSSANPSPSTTHHHRKENQTGTSGFEKKRGRKTDGDGNPEISSSSSSGEEVKTVRASPSVPQPVFGMMSVSGRSREMEDAVSVSTCVLGSENFRRQLVHFFAVYDGHGGPHVAALCREKMHVFVQEEFSRVMCTREEGESGGGGSSAGEEEEATWRRVMQRSFERMDEMALSTCACGSVGGQCGCHPMEVALGGSTAVVAVLTPDHIIVANCGDSRAVLCRGGRAIPLSNDHKPDRNDELARIEAAGGRVIFVNGARVEGILAMSRAIGDKYLKSVVISEPEITFTKRESDDECLILASDGLWDVLSSELACEVARECLQEGAAAAATTIDLNATPQIEEEGAGTSYPSRSALAAALLTRLALGRKSTDNISVIVIDLKRS 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7901160 7907362 + CePI673135_05g009130.1 Cec05g0913 202716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0913 416 MobiDBLite consensus disorder prediction 1 95 - -
Cec05g0913 416 Gene3D - 92 416 IPR036457 -
Cec05g0913 416 Pfam Protein phosphatase 2C 100 365 IPR001932 -
Cec05g0913 416 SUPERFAMILY PP2C-like 93 414 IPR036457 -
Cec05g0913 416 PANTHER PROTEIN PHOSPHATASE 58 412 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec05g0913 416 MobiDBLite consensus disorder prediction 45 71 - -
Cec05g0913 416 ProSiteProfiles PPM-type phosphatase domain profile. 99 413 IPR001932 -
Cec05g0913 416 FunFam Protein phosphatase 2C 50 121 416 - -
Cec05g0913 416 CDD PP2Cc 99 413 IPR001932 -
Cec05g0913 416 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169(InterPro)
Cec05g0913 416 MobiDBLite consensus disorder prediction 72 88 - -
Cec05g0913 416 MobiDBLite consensus disorder prediction 1 23 - -
Cec05g0913 416 SMART PP2C_4 89 411 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0913 Cec-Chr5:7901160 Cec05g1054 Cec-Chr5:9250624 7.10E-65 dispersed
Cec05g0913 Cec-Chr5:7901160 Cec06g0432 Cec-Chr6:4890063 2.60E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0913 K14497 - csv:101206634 699.508