Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g0946 | ATGGCATCTTCTCGCCTGACTGGAGGATTAGCTCAGTCTCCATCAAGTTCTGGGATTTTCTACCAAGGAGAAGGGCAGTCCCCAGCTATTGTTAATTCTCATTTGAGCCAATCATTTGCAAATTCATCAAATTCAATTCCAGGAACTGGATGTTCTGATTTTGGTCCAGTGTCCGGAGACATGAACAATGCAGTTTTAAATAGTGTGGCAAATTCAGGACCCAGTGTGGGTGCAAGTTCATTAGTTACGGATGCAAACTCTGCACTTTCAGGGGGGCCACATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCATACATGCGCTTGCCTGCATCGCCTATGTCATTCAATTCAAATAACATTAGTGTTTCGGGGTCCTCAGTTATAGATGGATCCTGTGTTGTGCAGCAAAATTCTCAACAGGACCAAAATATCCAACACATACAGCAACAGACTCAGCCAGGTGCTTCACATGCCACATCATTACCAACATCACAAATAGCCCAAGTATCACTTCCGTTGGGCGGTAAACATCAGGGATCTTTCATTCCAGATCCAAACAGTTATTCTCAGGTGCAGAAGAAACCACGACTGGATATAAAGCCGGAAGATGTGCTGCAACAGCAAGTCTTGCAGCAGCTATTTCAGAGACAGGATTCCATGCAGTCACAAAACCGTAACTCACAGTTACAAGCTTTATTTCAACAGCAAAGAATGCGGCAACAGCAGCAGATTTTGCAGTCTCTACCTCAGTACAGGGCTCAGCTTCAGCAACAGCAGCAGCAGATACAGTTGAGGCAGCAATTGCAACAGCAGGTAATGCAGCCTGTATCACCCATGAAGCGGCCCCCATATGATGCTGGTGGTGTTTGTGCTCGCCGGCTGATGCAATATTTATATCATCAGCGGCAAAGACCTCCTGAAAATAGCATAGCCTACTGGCGAAAGTTTGTAGCAGAGTATTACTCTCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTGTATGAGAATGTTGGCCACCATGCTCTTGGTGTGTTTCCTCAGGCAGCTATGGATGCGTGGCAGTGTGACATTTGTGGTTCCAAATCAGGGAGGGGATTTGAGGCTACGTTTGAAGTACTACCAAGACTCAGCGAGATCAAATTTGGAAGTGGAGTTATTGATGAGCTTTTATTTCTGGACCTTCCCCAAGAAAGAAGATTTTCTACTGGACTTATGATGTTAGAGTATGGAAAAGCAATTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGCGAGGGTCAGCTTCGTATCATATTCACTCAAGACTTGAAGATTTTGTGTTGGGAATTTTGTGCTTGGCGTCATGAAGAACTTCTTCCTCGTAGGTTGGTTGCGCCTCAGGTTAATCAGCTGGTACAGGTTGCCCAGAAATGCCAAAACACAATTGCTGAAAGTGGGCCGGATGGTGTTTCTCAGAAAGATTTGCAGACAAATAGCAATATGGTACTGACGGCTGGTCGTCAGCTTGCTAAGAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCTCTAAAAGATACGTCAGGTGTTTGCAGATATCAGAGGTTGTCAACAGTATGAAAGATCTGATTGGTTTCTGCCGGGATCAAAAAGTTGGGCCTATCGAGGGCTTGAAGAATTATCCTAGACATGCCACTGCAGCCAAGCTCCAAATGCAAAAAATGCAGGAGATGGAACAGTTAGCGAGTATTCAAGGTCTTCCCACCGACCGCAACACAATTAATAAGCTGATGACATTGCATCCTGAACTTGATAACCATGGGCTTAATAACCATCAGATGATTGGTCGAGGAGGTTTCAGTGGTGCAATGACTACATACCAGAATATCCTCATGAGACAGAACTCTATGAATTCCAACCCCAGCCCACATCAACAGGAGGCCTCATCTTCTTTCAATAATCCCAACTATAATCCATCCCCTACACTCCAGGGGACTGTATCCCTGATGCCTGGATCCGTACAGAACTCCTCTGTTGGTGGCTTTTCAGGCGCTCAGCAAGCCTTGCAAAAGCAATCGCAGCAGCTGCAACATCATCCACTAAATCCTGGCTCCTTGGTCCAGCAAAATCATCCTCAGACGATTCAAGGTGGCCAGGCCCTACAACAACAGATGATCCAGCAACTACTGCAGATGTCAAGTAACAATAAGAGTACCGGTTTACAACAGCAACCCCTTACTGGACCAAATGCAAATAGAAGTTCAGGAAGAAGGGGCATGGGTTTTGTGGGCAACACCTCAGTTGCAGCTGTGGCATCTGGAAATATGTCTGGTAGCAACGTCCCTGGTCCGAGTAGGAGCAATAGCTTCAAAGCTGCTTCAAATAGTGAGTCCTCTGCTGGTAACAGTGAATTCAATCAGAAGGGTTCGGATTTCCCGCAAGATCTTCATCTGCCAGAGAATCTGGTTGAAGATATAGGCCAAGATTTCCCTGAAAACGGGTTTGTTAACAATGACCTTGATGAGGATTTGGGTTATGTCTGGAAGGCTTGA | 2538 | 45.47 | MASSRLTGGLAQSPSSSGIFYQGEGQSPAIVNSHLSQSFANSSNSIPGTGCSDFGPVSGDMNNAVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSQQDQNIQHIQQQTQPGASHATSLPTSQIAQVSLPLGGKHQGSFIPDPNSYSQVQKKPRLDIKPEDVLQQQVLQQLFQRQDSMQSQNRNSQLQALFQQQRMRQQQQILQSLPQYRAQLQQQQQQIQLRQQLQQQVMQPVSPMKRPPYDAGGVCARRLMQYLYHQRQRPPENSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDELLFLDLPQERRFSTGLMMLEYGKAIQESVYEQLRVVREGQLRIIFTQDLKILCWEFCAWRHEELLPRRLVAPQVNQLVQVAQKCQNTIAESGPDGVSQKDLQTNSNMVLTAGRQLAKSLELQLLNDLGFSKRYVRCLQISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQMQKMQEMEQLASIQGLPTDRNTINKLMTLHPELDNHGLNNHQMIGRGGFSGAMTTYQNILMRQNSMNSNPSPHQQEASSSFNNPNYNPSPTLQGTVSLMPGSVQNSSVGGFSGAQQALQKQSQQLQHHPLNPGSLVQQNHPQTIQGGQALQQQMIQQLLQMSSNNKSTGLQQQPLTGPNANRSSGRRGMGFVGNTSVAAVASGNMSGSNVPGPSRSNSFKAASNSESSAGNSEFNQKGSDFPQDLHLPENLVEDIGQDFPENGFVNNDLDEDLGYVWKA | 845 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 8272061 | 8277259 | + | CePI673135_05g009460.1 | Cec05g0946 | 202749 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g0946 | 845 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cec05g0946 | 845 | MobiDBLite | consensus disorder prediction | 769 | 805 | - | - | |
Cec05g0946 | 845 | MobiDBLite | consensus disorder prediction | 731 | 757 | - | - | |
Cec05g0946 | 845 | MobiDBLite | consensus disorder prediction | 140 | 162 | - | - | |
Cec05g0946 | 845 | MobiDBLite | consensus disorder prediction | 630 | 706 | - | - | |
Cec05g0946 | 845 | Pfam | LIM-domain binding protein | 294 | 554 | IPR029005 | - | |
Cec05g0946 | 845 | MobiDBLite | consensus disorder prediction | 769 | 812 | - | - | |
Cec05g0946 | 845 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 17 | 834 | IPR029005 | GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER) | |
Cec05g0946 | 845 | MobiDBLite | consensus disorder prediction | 731 | 749 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0564 | Cec-Chr1:5848159 | Cec05g0946 | Cec-Chr5:8272061 | 4.20E-183 | dispersed | |
Cec05g0946 | Cec-Chr5:8272061 | Cec08g0325 | Cec-Chr8:7548167 | 2.10E-92 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g0946 | - | - | - | 0.0 |