Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0946 ATGGCATCTTCTCGCCTGACTGGAGGATTAGCTCAGTCTCCATCAAGTTCTGGGATTTTCTACCAAGGAGAAGGGCAGTCCCCAGCTATTGTTAATTCTCATTTGAGCCAATCATTTGCAAATTCATCAAATTCAATTCCAGGAACTGGATGTTCTGATTTTGGTCCAGTGTCCGGAGACATGAACAATGCAGTTTTAAATAGTGTGGCAAATTCAGGACCCAGTGTGGGTGCAAGTTCATTAGTTACGGATGCAAACTCTGCACTTTCAGGGGGGCCACATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCATACATGCGCTTGCCTGCATCGCCTATGTCATTCAATTCAAATAACATTAGTGTTTCGGGGTCCTCAGTTATAGATGGATCCTGTGTTGTGCAGCAAAATTCTCAACAGGACCAAAATATCCAACACATACAGCAACAGACTCAGCCAGGTGCTTCACATGCCACATCATTACCAACATCACAAATAGCCCAAGTATCACTTCCGTTGGGCGGTAAACATCAGGGATCTTTCATTCCAGATCCAAACAGTTATTCTCAGGTGCAGAAGAAACCACGACTGGATATAAAGCCGGAAGATGTGCTGCAACAGCAAGTCTTGCAGCAGCTATTTCAGAGACAGGATTCCATGCAGTCACAAAACCGTAACTCACAGTTACAAGCTTTATTTCAACAGCAAAGAATGCGGCAACAGCAGCAGATTTTGCAGTCTCTACCTCAGTACAGGGCTCAGCTTCAGCAACAGCAGCAGCAGATACAGTTGAGGCAGCAATTGCAACAGCAGGTAATGCAGCCTGTATCACCCATGAAGCGGCCCCCATATGATGCTGGTGGTGTTTGTGCTCGCCGGCTGATGCAATATTTATATCATCAGCGGCAAAGACCTCCTGAAAATAGCATAGCCTACTGGCGAAAGTTTGTAGCAGAGTATTACTCTCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTGTATGAGAATGTTGGCCACCATGCTCTTGGTGTGTTTCCTCAGGCAGCTATGGATGCGTGGCAGTGTGACATTTGTGGTTCCAAATCAGGGAGGGGATTTGAGGCTACGTTTGAAGTACTACCAAGACTCAGCGAGATCAAATTTGGAAGTGGAGTTATTGATGAGCTTTTATTTCTGGACCTTCCCCAAGAAAGAAGATTTTCTACTGGACTTATGATGTTAGAGTATGGAAAAGCAATTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGCGAGGGTCAGCTTCGTATCATATTCACTCAAGACTTGAAGATTTTGTGTTGGGAATTTTGTGCTTGGCGTCATGAAGAACTTCTTCCTCGTAGGTTGGTTGCGCCTCAGGTTAATCAGCTGGTACAGGTTGCCCAGAAATGCCAAAACACAATTGCTGAAAGTGGGCCGGATGGTGTTTCTCAGAAAGATTTGCAGACAAATAGCAATATGGTACTGACGGCTGGTCGTCAGCTTGCTAAGAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCTCTAAAAGATACGTCAGGTGTTTGCAGATATCAGAGGTTGTCAACAGTATGAAAGATCTGATTGGTTTCTGCCGGGATCAAAAAGTTGGGCCTATCGAGGGCTTGAAGAATTATCCTAGACATGCCACTGCAGCCAAGCTCCAAATGCAAAAAATGCAGGAGATGGAACAGTTAGCGAGTATTCAAGGTCTTCCCACCGACCGCAACACAATTAATAAGCTGATGACATTGCATCCTGAACTTGATAACCATGGGCTTAATAACCATCAGATGATTGGTCGAGGAGGTTTCAGTGGTGCAATGACTACATACCAGAATATCCTCATGAGACAGAACTCTATGAATTCCAACCCCAGCCCACATCAACAGGAGGCCTCATCTTCTTTCAATAATCCCAACTATAATCCATCCCCTACACTCCAGGGGACTGTATCCCTGATGCCTGGATCCGTACAGAACTCCTCTGTTGGTGGCTTTTCAGGCGCTCAGCAAGCCTTGCAAAAGCAATCGCAGCAGCTGCAACATCATCCACTAAATCCTGGCTCCTTGGTCCAGCAAAATCATCCTCAGACGATTCAAGGTGGCCAGGCCCTACAACAACAGATGATCCAGCAACTACTGCAGATGTCAAGTAACAATAAGAGTACCGGTTTACAACAGCAACCCCTTACTGGACCAAATGCAAATAGAAGTTCAGGAAGAAGGGGCATGGGTTTTGTGGGCAACACCTCAGTTGCAGCTGTGGCATCTGGAAATATGTCTGGTAGCAACGTCCCTGGTCCGAGTAGGAGCAATAGCTTCAAAGCTGCTTCAAATAGTGAGTCCTCTGCTGGTAACAGTGAATTCAATCAGAAGGGTTCGGATTTCCCGCAAGATCTTCATCTGCCAGAGAATCTGGTTGAAGATATAGGCCAAGATTTCCCTGAAAACGGGTTTGTTAACAATGACCTTGATGAGGATTTGGGTTATGTCTGGAAGGCTTGA 2538 45.47 MASSRLTGGLAQSPSSSGIFYQGEGQSPAIVNSHLSQSFANSSNSIPGTGCSDFGPVSGDMNNAVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSQQDQNIQHIQQQTQPGASHATSLPTSQIAQVSLPLGGKHQGSFIPDPNSYSQVQKKPRLDIKPEDVLQQQVLQQLFQRQDSMQSQNRNSQLQALFQQQRMRQQQQILQSLPQYRAQLQQQQQQIQLRQQLQQQVMQPVSPMKRPPYDAGGVCARRLMQYLYHQRQRPPENSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDELLFLDLPQERRFSTGLMMLEYGKAIQESVYEQLRVVREGQLRIIFTQDLKILCWEFCAWRHEELLPRRLVAPQVNQLVQVAQKCQNTIAESGPDGVSQKDLQTNSNMVLTAGRQLAKSLELQLLNDLGFSKRYVRCLQISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQMQKMQEMEQLASIQGLPTDRNTINKLMTLHPELDNHGLNNHQMIGRGGFSGAMTTYQNILMRQNSMNSNPSPHQQEASSSFNNPNYNPSPTLQGTVSLMPGSVQNSSVGGFSGAQQALQKQSQQLQHHPLNPGSLVQQNHPQTIQGGQALQQQMIQQLLQMSSNNKSTGLQQQPLTGPNANRSSGRRGMGFVGNTSVAAVASGNMSGSNVPGPSRSNSFKAASNSESSAGNSEFNQKGSDFPQDLHLPENLVEDIGQDFPENGFVNNDLDEDLGYVWKA 845
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8272061 8277259 + CePI673135_05g009460.1 Cec05g0946 202749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0946 845 MobiDBLite consensus disorder prediction 1 22 - -
Cec05g0946 845 MobiDBLite consensus disorder prediction 769 805 - -
Cec05g0946 845 MobiDBLite consensus disorder prediction 731 757 - -
Cec05g0946 845 MobiDBLite consensus disorder prediction 140 162 - -
Cec05g0946 845 MobiDBLite consensus disorder prediction 630 706 - -
Cec05g0946 845 Pfam LIM-domain binding protein 294 554 IPR029005 -
Cec05g0946 845 MobiDBLite consensus disorder prediction 769 812 - -
Cec05g0946 845 PANTHER LIM DOMAIN-BINDING PROTEIN 17 834 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Cec05g0946 845 MobiDBLite consensus disorder prediction 731 749 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0564 Cec-Chr1:5848159 Cec05g0946 Cec-Chr5:8272061 4.20E-183 dispersed
Cec05g0946 Cec-Chr5:8272061 Cec08g0325 Cec-Chr8:7548167 2.10E-92 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0946 - - - 0.0