Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g0978 | ATGGTTTTGTTTGGGAAAGTTGTGGTTTCATGGTGGATTTTGCCTATTTTGGCTCATAAAAATTTGAAGAGAAATGGATTTGAAGGTCCTTCTCCTACTTTCCCTCTTGGAAATATTACAGAGATGAAGAAGATAATGAAAGCTGCTGCAGCCATTAGTGGATCATCATCTACCTCCTTTGCTTCTTCAAATAATTTCTCCCATGATATCCATTCAACTATTTTCCCTCACTTTGCTCAATGGCAGAATTCTTATGGGAAGAAGTTTGTATATTGGTTGGGGACAGAGCCATTTTTGTACATAGCAGATCCACAGCTTGTGAAGAAGATATCTGAAGCTGTGATGGGGAAGAATTGGGGGAAGCCAGCTGTGTTCAGAAACGACCGAGAACCGATGTTCGGCGATGGCCTCGTCATGACCGAAGGTGACGACTGGATTCGCCATCGCCATATCCTCACTCCCGCCTTCAACCCCGCCAATTTAAAGGCAATGACAAAGTTCATGGTGGAGTCCACCACTAAAATGGTAAAAGAGTGGAGAAGCCTGGTAAACTCCGGGCAACCGGAAATCGACGTGGAAAGAGAAATTACGGCAACCGCCGGCGACATAATCGCAAAGGCAAGCTTCGGAATGTGGAGTGGCGGCGGGGGGGAAGAGGCGTTGAACAACCTGAGAGCTCTTCAGTTAACTCTGTTCTCCAACAGCAGCTACGTTGGGGTCCCATTCAGCAGTGTATTTCTGTACCCTGCCCGAACCCTAGCCGCCAAGAAACTGGGTGCCCAAATCGACCGCCTCTTCTTTTCCATCATATCTCACAGGAAACTCTCCCCCGATTCCGATTCCGATTTGCTGACTCGGTTGATTCAGAGTCAAAGCAACCAGAGGGTGGCCCTGACCCCGAGAGAAGTGGTGGACGAGTGTAAGACATTCTTCTTCGGCGGCCATGAGACGACGGCGCTGGCCATCAGTTGGACGCTGCTGCTGTTGGCCACTCGCCCGGAATGGCAAAACATTTTACGAGAGGAGATTAAAGAAGTGATCGGAGATAAAGATATTGATTTCTCCATGCTTTCTTCACTCAAAAAGATGGGATGGGTGTGGAATGAGGTACTTAGGCTATACCCCTCAGCCCCAAACATACAAAGACAAGCAAAAGGAGACATTGATTTAGGGGACATGAAGATCCCAAAAGGGACCAACATATGGATAGACATCGTCGCAATGCATCACGACTCGACCCTATGGGGCGACGACGTTAACGAGTTCAAGCCAGAGAGGTTCCAACAAGACACCATTCATGGCGGGTGCAACCACAAGATGGGATATTTGCCTTTTGGTTTTGGGGGGAGAATGTGCATTGGTAGAAACTTATCTTCTATGGAGTATAAGATTGTCCTAACCCTAATTCTTTCTACCTTTTCACTCTCTCTTTCTCCTTCTTACTCTCATTCTCCTGCTACTTTGCTCTCTCTGAGACCTGCCCATGGCATTCCTCTCATTCTAAGCCCGCTTTATCCTTAA | 1521 | 47.34 | MVLFGKVVVSWWILPILAHKNLKRNGFEGPSPTFPLGNITEMKKIMKAAAAISGSSSTSFASSNNFSHDIHSTIFPHFAQWQNSYGKKFVYWLGTEPFLYIADPQLVKKISEAVMGKNWGKPAVFRNDREPMFGDGLVMTEGDDWIRHRHILTPAFNPANLKAMTKFMVESTTKMVKEWRSLVNSGQPEIDVEREITATAGDIIAKASFGMWSGGGGEEALNNLRALQLTLFSNSSYVGVPFSSVFLYPARTLAAKKLGAQIDRLFFSIISHRKLSPDSDSDLLTRLIQSQSNQRVALTPREVVDECKTFFFGGHETTALAISWTLLLLATRPEWQNILREEIKEVIGDKDIDFSMLSSLKKMGWVWNEVLRLYPSAPNIQRQAKGDIDLGDMKIPKGTNIWIDIVAMHHDSTLWGDDVNEFKPERFQQDTIHGGCNHKMGYLPFGFGGRMCIGRNLSSMEYKIVLTLILSTFSLSLSPSYSHSPATLLSLRPAHGIPLILSPLYP | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 8516002 | 8519187 | + | CePI673135_05g009780.1 | Cec05g0978 | 202781 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g0978 | 506 | PRINTS | E-class P450 group I signature | 452 | 475 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | PRINTS | E-class P450 group I signature | 442 | 452 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | PRINTS | E-class P450 group I signature | 82 | 101 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 15 | 498 | IPR050665 | GO:0004497(PANTHER) | |
| Cec05g0978 | 506 | Pfam | Cytochrome P450 | 73 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 445 | 454 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cec05g0978 | 506 | PRINTS | P450 superfamily signature | 443 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | PRINTS | P450 superfamily signature | 452 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | Gene3D | Cytochrome P450 | 62 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g0978 | 506 | SUPERFAMILY | Cytochrome P450 | 71 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec05g0978 | Cec-Chr5:8516002 | Cec05g1336 | Cec-Chr5:13963554 | 6.60E-89 | dispersed | |
| Cec01g0447 | Cec-Chr1:4608889 | Cec05g0978 | Cec-Chr5:8516002 | 7.70E-161 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g0978 | - | - | - | 0.0 |