Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0979 ATGAGTCCGCCCGCCGTCGAACCTCCGTTACTTCTTCTTTTCCTGCTTGCTGCAGCGCTGCGGTGCCCTCTCGCCGGAGCGCGCCTTCTGGTGGAGATGACGGTGGTCCGAAACGCCTCTTCCATCGGAGCCTTTTGTTTGGACGGAAGCTCGCCGGCGTATCACCTGGACAGAGGATTCGGCGCCGGAGCGGGAAACTGGCTTTTACAGTTCGAGGGTGGTGGGTGGTGCAATGATGTAAAGTCTTGTTTGGAGAGAGCGAATAGTCGAAGAGGATCAACGCGTTTGATGACCAAATGGGAAGACTTCTCTGGCATTCTTAGCAACAATGCTTCTCTTAATCCAGTTGACTCCATGGGACTTGGTGTTCGTGAAGATGTGAAAACTATTGTCAATACGGGCATAAGAATGTTTTATGCTCGAACAAGTACACGATCCCGACTTGTTATGTGGGTACTTGTTAAGTATGCTAAGCAACCGGGCAGCACGGAATGTGGTTACAGACGTGATTTTTATAACTGGAACCGTGTGAAACTCAGGTACTGTGATGGAGCCTCATTTGCAGGAGATGCCTTGTTTGACAATGGGACATCGCTGCTTTATTTCAAAGGCCAAAAGATATGGGAATCCATCATTCTTGACCTTCTACCAAAAGGGTTGGGGACAGCAAGGAAGGCTCTGCTTTCTGGTTGCTCTGCTGGAGGTTTAGCAACTTTTCTTCATTGTGAAAATTTCACCAAGTATTTGCCAAGGAATGCTAGTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGACATTGGTCTAAACCACACAATGAGGAACTTTTATAGGGATCTTGTGGCTCTTCAGGGGATGGAGCAAAATTTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGAATTGTGCATATTCCCTCAGTATTCATTGAAGTACATAACAACACCATTTTTCATTCTGAATTCAGCATATGATGTTTACCAATTTCATCATGGGTTGGTGCCACCATCTGCTGATTTACATGGACATTGGAACCATTGCAAATTTAATCCAGCAGAATGTAGTGAACTACAGATTCAGGTATTGCAAGAGGAGGAATACACATGGTTTGCTGACGACTCCCCAACAATAGACAACAAGACTATAGCAGAAGCAGTTGGAGATTGGTATTTTAGCAGGAGAAACACAAAGGAAATTGATTGTGCTTATCCATACAAACTAAACTTGTTGATTTTCTTGGACGATCAGCCTTTGGGCTTGATGATCTTCTTGGGTGATCAGCTTATCTTTTAG 1305 44.75 MSPPAVEPPLLLLFLLAAALRCPLAGARLLVEMTVVRNASSIGAFCLDGSSPAYHLDRGFGAGAGNWLLQFEGGGWCNDVKSCLERANSRRGSTRLMTKWEDFSGILSNNASLNPVDSMGLGVREDVKTIVNTGIRMFYARTSTRSRLVMWVLVKYAKQPGSTECGYRRDFYNWNRVKLRYCDGASFAGDALFDNGTSLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLATFLHCENFTKYLPRNASVKCLSDAGFFLDLRDIGLNHTMRNFYRDLVALQGMEQNLNENCTASSYFPELCIFPQYSLKYITTPFFILNSAYDVYQFHHGLVPPSADLHGHWNHCKFNPAECSELQIQVLQEEEYTWFADDSPTIDNKTIAEAVGDWYFSRRNTKEIDCAYPYKLNLLIFLDDQPLGLMIFLGDQLIF 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8521432 8538278 - CePI673135_05g009790.1 Cec05g0979 202782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0979 434 Pfam Pectinacetylesterase 28 115 IPR004963 GO:0016787(InterPro)
Cec05g0979 434 Pfam Pectinacetylesterase 169 368 IPR004963 GO:0016787(InterPro)
Cec05g0979 434 PANTHER NOTUM-RELATED 368 409 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1554 Cec-Chr4:35008103 Cec05g0979 Cec-Chr5:8521432 4.20E-19 dispersed
Cec05g0979 Cec-Chr5:8521432 Cec07g1216 Cec-Chr7:27659774 7.10E-76 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0979 K19882 - csv:101216160 597.816